Click here to switch to the map view.

The map label for this gene is 119944451

Identifier: 119944451

GI number: 119944451

Start: 866956

End: 867501

Strand: Direct

Name: 119944451

Synonym: Ping_0679

Alternate gene names: NA

Gene position: 866956-867501 (Clockwise)

Preceding gene: 119944449

Following gene: 119944452

Centisome position: 19.01

GC content: 38.83

Gene sequence:

>546_bases
TTGATCAAAATGGATGCTGTTGAAAGGTTTTATATGGAAATTAAACATAACAATAATCGTGGCTTTACATTCATTGAGTT
ATTGGCTTCTCTAACGGTAATCATGATTCTGGTAGCAGCTGGCATCAGTAATTACGGGGCTCTCTTTGCACAGCAGACTT
TAATACAAAAAACTGAACATCTTTATCACTTTTTGCGTTTAGCGCAGACTCAGGCTATTAAAGGTAATCGACAGATTTAT
GTACATTTTTGCCAGGCCACAAATTCTAATAGTTGGAAAATGGCGATGTCAAATAGTCCTGTCGCTGATTCATGTTCGTT
AAACGGTCATAATAAAGTGGAACAGTTAGCCGACGGTAAAAAGCTGTTTGCTGCGACAAATTTTGGCAGTAACCAAGCCT
CCTACCAGCCGATGCGATTTGACACTAATCTCGGTAATGTGACCTTGAGTAATAGTAACGGGGACTCATTAAAAGTGATC
CAGTCAAGAATACGTTTAAGAATATGTTCTCCGGACAGCGCTCGATTAGGATATGAACAATGTTAA

Upstream 100 bases:

>100_bases
TACTTGATTAAGCATCTGTTTAAACTAAGCTTTGTTGATGCAAAAATTATTTCTGCATCAAACTTTTTTGAGGGATATAT
AAACCCAAAGACCTCAATTT

Downstream 100 bases:

>100_bases
CTAAAAACAGAGGATATTCATTAATTGAACTGATGCTGGCGCTATTACTTGGCTCAGTACTGTTATCTATGGTGATTGGC
CTGTATGTCACCGGTGTCTC

Product: type IV pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIKMDAVERFYMEIKHNNNRGFTFIELLASLTVIMILVAAGISNYGALFAQQTLIQKTEHLYHFLRLAQTQAIKGNRQIY
VHFCQATNSNSWKMAMSNSPVADSCSLNGHNKVEQLADGKKLFAATNFGSNQASYQPMRFDTNLGNVTLSNSNGDSLKVI
QSRIRLRICSPDSARLGYEQC

Sequences:

>Translated_181_residues
MIKMDAVERFYMEIKHNNNRGFTFIELLASLTVIMILVAAGISNYGALFAQQTLIQKTEHLYHFLRLAQTQAIKGNRQIY
VHFCQATNSNSWKMAMSNSPVADSCSLNGHNKVEQLADGKKLFAATNFGSNQASYQPMRFDTNLGNVTLSNSNGDSLKVI
QSRIRLRICSPDSARLGYEQC
>Mature_181_residues
MIKMDAVERFYMEIKHNNNRGFTFIELLASLTVIMILVAAGISNYGALFAQQTLIQKTEHLYHFLRLAQTQAIKGNRQIY
VHFCQATNSNSWKMAMSNSPVADSCSLNGHNKVEQLADGKKLFAATNFGSNQASYQPMRFDTNLGNVTLSNSNGDSLKVI
QSRIRLRICSPDSARLGYEQC

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20289; Mature: 20289

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKMDAVERFYMEIKHNNNRGFTFIELLASLTVIMILVAAGISNYGALFAQQTLIQKTEH
CCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LYHFLRLAQTQAIKGNRQIYVHFCQATNSNSWKMAMSNSPVADSCSLNGHNKVEQLADGK
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCC
KLFAATNFGSNQASYQPMRFDTNLGNVTLSNSNGDSLKVIQSRIRLRICSPDSARLGYEQ
EEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHEEEEECCCCCCCCCCC
C
C
>Mature Secondary Structure
MIKMDAVERFYMEIKHNNNRGFTFIELLASLTVIMILVAAGISNYGALFAQQTLIQKTEH
CCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LYHFLRLAQTQAIKGNRQIYVHFCQATNSNSWKMAMSNSPVADSCSLNGHNKVEQLADGK
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCC
KLFAATNFGSNQASYQPMRFDTNLGNVTLSNSNGDSLKVIQSRIRLRICSPDSARLGYEQ
EEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHEEEEECCCCCCCCCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA