| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944452
Identifier: 119944452
GI number: 119944452
Start: 867495
End: 868100
Strand: Direct
Name: 119944452
Synonym: Ping_0680
Alternate gene names: NA
Gene position: 867495-868100 (Clockwise)
Preceding gene: 119944451
Following gene: 119944453
Centisome position: 19.03
GC content: 40.43
Gene sequence:
>606_bases ATGTTAACTAAAAACAGAGGATATTCATTAATTGAACTGATGCTGGCGCTATTACTTGGCTCAGTACTGTTATCTATGGT GATTGGCCTGTATGTCACCGGTGTCTCTTCCGGTGCAAAAAGTTTAAAATATTCACGGTTACGTACTGATTTGCAGTCGA TTATGTTAATTATGGAAACTGATATCAGGCGGGCAGGATACGGAGGCAGCGATTTTTTAGTGGGCAGTGGCGATACTAAA ATGGTTGATACATTTACTAGCGATACATTAAAGTGCATCGTCTATTCTTACAATCATGACTCTGCCACCGCTATTACTGA TACAAATCGAATGGGATTCAAATTTTTGCCTGCTGAGAATGAAATTAAATTTGGCAGTGGAGTTGATCCCCTTGCCGCTC ATTGTGACTCAACAGGTTACTGGGAAGGACTTTCAGATAACAATTTTATAACAATAACCGATCTGACTTTTACTGAATCA GTTGTTTCCAGTGCATCGGCAAGCATACGTTCTGTTGAAATTCATCTGTCTGGCGAGCTGGCCGCCGATAGCGATTATAA ATATGCCATTAACACTACGGTGCAAGTTCGAAATCTTGAACTCTAG
Upstream 100 bases:
>100_bases TGACCTTGAGTAATAGTAACGGGGACTCATTAAAAGTGATCCAGTCAAGAATACGTTTAAGAATATGTTCTCCGGACAGC GCTCGATTAGGATATGAACA
Downstream 100 bases:
>100_bases CCTTTTGAATTATAACGTTTACTTATTCGATAATCATATTGGCTGCTAATAAAAGGGAAATAAAATGTATCAGTTGATTT TTTATGTACCAGTTTCACAT
Product: putative type IV pilus assembly protein PilW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MLTKNRGYSLIELMLALLLGSVLLSMVIGLYVTGVSSGAKSLKYSRLRTDLQSIMLIMETDIRRAGYGGSDFLVGSGDTK MVDTFTSDTLKCIVYSYNHDSATAITDTNRMGFKFLPAENEIKFGSGVDPLAAHCDSTGYWEGLSDNNFITITDLTFTES VVSSASASIRSVEIHLSGELAADSDYKYAINTTVQVRNLEL
Sequences:
>Translated_201_residues MLTKNRGYSLIELMLALLLGSVLLSMVIGLYVTGVSSGAKSLKYSRLRTDLQSIMLIMETDIRRAGYGGSDFLVGSGDTK MVDTFTSDTLKCIVYSYNHDSATAITDTNRMGFKFLPAENEIKFGSGVDPLAAHCDSTGYWEGLSDNNFITITDLTFTES VVSSASASIRSVEIHLSGELAADSDYKYAINTTVQVRNLEL >Mature_201_residues MLTKNRGYSLIELMLALLLGSVLLSMVIGLYVTGVSSGAKSLKYSRLRTDLQSIMLIMETDIRRAGYGGSDFLVGSGDTK MVDTFTSDTLKCIVYSYNHDSATAITDTNRMGFKFLPAENEIKFGSGVDPLAAHCDSTGYWEGLSDNNFITITDLTFTES VVSSASASIRSVEIHLSGELAADSDYKYAINTTVQVRNLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21873; Mature: 21873
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKNRGYSLIELMLALLLGSVLLSMVIGLYVTGVSSGAKSLKYSRLRTDLQSIMLIMET CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DIRRAGYGGSDFLVGSGDTKMVDTFTSDTLKCIVYSYNHDSATAITDTNRMGFKFLPAEN HHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCEEEECCCC EIKFGSGVDPLAAHCDSTGYWEGLSDNNFITITDLTFTESVVSSASASIRSVEIHLSGEL CCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCEEEEEEEECCCE AADSDYKYAINTTVQVRNLEL ECCCCCEEEEEEEEEEEEECC >Mature Secondary Structure MLTKNRGYSLIELMLALLLGSVLLSMVIGLYVTGVSSGAKSLKYSRLRTDLQSIMLIMET CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DIRRAGYGGSDFLVGSGDTKMVDTFTSDTLKCIVYSYNHDSATAITDTNRMGFKFLPAEN HHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCEEEECCCC EIKFGSGVDPLAAHCDSTGYWEGLSDNNFITITDLTFTESVVSSASASIRSVEIHLSGEL CCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCEEEEEEEECCCE AADSDYKYAINTTVQVRNLEL ECCCCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA