Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yigI [C]
Identifier: 119944086
GI number: 119944086
Start: 395445
End: 395825
Strand: Direct
Name: yigI [C]
Synonym: Ping_0301
Alternate gene names: 119944086
Gene position: 395445-395825 (Clockwise)
Preceding gene: 119944083
Following gene: 119944088
Centisome position: 8.67
GC content: 42.78
Gene sequence:
>381_bases ATGAAGGATATTGTTGTACCATTTCTTGAGCACACTGGGGCTTCATTAAAAAACTTTTCCAAAGGGAAGGCGGAAGTTGA ATTACATGTACAGCCTTATCATCTCCAACATATAGGCTTTGTACACGGTGGTGTTATCTCCACACTGATGGATAACACCG GCTGGTATGCTGCCGTCTCTAACCTTGAAAACGGATTTACAGCCGTTACTATGGAGATAAAGATAAACTACCTAAAACCT GCTTTAGGAAAGTACCTGGTAGCCTCAGCTAGCGTGAAACGGCAAGGTCGTACGACCTCTTTTGTGACTATTGAACTTCA TGACCAAGGAGAACTTATCGCCTATGCAACAGGAACTTACGCGCTTATAAAGGAGGATTAA
Upstream 100 bases:
>100_bases AGAATTTTTGTTCTTTCTATATGCTATCAAAACAAAATAAAGCTAAAACAGAGTTTTATAGTTGCTATAATCATTTCAAT TTAAAACTAGGGAGCAAGAC
Downstream 100 bases:
>100_bases ACCTTTACAAATTAAGTTCACTGTTCACTTGTCATTAGAGGCTCTTTACAAGGAGCCCTTTTTTTAAATTATCCGAGAGA TAATAGGTTTTCAGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation Protein PaaI; Conserved Domain Protein; Thioesterase
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKDIVVPFLEHTGASLKNFSKGKAEVELHVQPYHLQHIGFVHGGVISTLMDNTGWYAAVSNLENGFTAVTMEIKINYLKP ALGKYLVASASVKRQGRTTSFVTIELHDQGELIAYATGTYALIKED
Sequences:
>Translated_126_residues MKDIVVPFLEHTGASLKNFSKGKAEVELHVQPYHLQHIGFVHGGVISTLMDNTGWYAAVSNLENGFTAVTMEIKINYLKP ALGKYLVASASVKRQGRTTSFVTIELHDQGELIAYATGTYALIKED >Mature_126_residues MKDIVVPFLEHTGASLKNFSKGKAEVELHVQPYHLQHIGFVHGGVISTLMDNTGWYAAVSNLENGFTAVTMEIKINYLKP ALGKYLVASASVKRQGRTTSFVTIELHDQGELIAYATGTYALIKED
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI231567183, Length=103, Percent_Identity=35.9223300970874, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI8923812, Length=103, Percent_Identity=35.9223300970874, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13853; Mature: 13853
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIVVPFLEHTGASLKNFSKGKAEVELHVQPYHLQHIGFVHGGVISTLMDNTGWYAAVS CCCEEEEHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCHHCHHHHHHHCCCCCEEEEC NLENGFTAVTMEIKINYLKPALGKYLVASASVKRQGRTTSFVTIELHDQGELIAYATGTY CCCCCEEEEEEEEEEEECCCCHHHHEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCEE ALIKED EEEECC >Mature Secondary Structure MKDIVVPFLEHTGASLKNFSKGKAEVELHVQPYHLQHIGFVHGGVISTLMDNTGWYAAVS CCCEEEEHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCHHCHHHHHHHCCCCCEEEEC NLENGFTAVTMEIKINYLKPALGKYLVASASVKRQGRTTSFVTIELHDQGELIAYATGTY CCCCCEEEEEEEEEEEECCCCHHHHEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCEE ALIKED EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA