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The map label for this gene is glcB [H]

Identifier: 119944088

GI number: 119944088

Start: 397705

End: 399873

Strand: Direct

Name: glcB [H]

Synonym: Ping_0303

Alternate gene names: 119944088

Gene position: 397705-399873 (Clockwise)

Preceding gene: 119944086

Following gene: 119944089

Centisome position: 8.72

GC content: 42.19

Gene sequence:

>2169_bases
ATGAATTTACCACAACAAAAACAGAGTGAAATTGAGTCAGGTTTTTACAATTTCATCAATCAAGAAGTACTGCCACATAC
AAATTTGAATGCTGATGATTTCTGGTTTGACTTAATGAAATTGGTCAACGATTTTTCACCACTTAATTCGCAGTTATTAG
CCACGCGTAAAACAATGCAGAAGCAGATTGATGATTGGCATCGGTCGCATCAGAACTTTGATCAACAGGACTACCTGAAA
TTTTTAGAAGAAATCGGTTATTTAGTTGAGCAGGGCGAGTCCTTTAATATCGAAACAGAGAATGTGGACAGTGAAATATC
CACATTAGCAGGACCGCAACTGGTTGTACCGGTACAAAATGCACGCTTTGCATTAAATGCTGCCAATGCCAGATGGGGCA
GTTTATACGATGCCTATTACGGCACTGATCTTATCCAGAAAACCGGCGCGTTAAAACCCGGTTCTGACTTTAATGTAGCC
CGCGGCCAACGTGTGATTACCTTAGCTAAAGACTTTCTTGATGAGGTGTTCCCGCTGGATAGCGGCTCGCACCATGATGT
TTTAAGCTATTTAGTTTATTACCAGCATCTTCTGGCTTTTTTCCCGGATGGCAGTAAAACCGGCTTAAAAACCCCCGCTC
AGTTTATTGCATTGGATGGTTCGAAAAGCGATCCGAGTTATCTTCTGCTGAAAAACAATGGCTTACATATTGGCATTGTG
ATTGATCGCCACGGTAAAATTGGCTGTTCAGATCTTTCCGGCATTGATGATATTCAAGTTGAATCTGCTTTGACGACTAT
CATAGATTTTGAAGACTCGATTTCTGCTGTGGATGCTGAGGATAAAGTTGAAGCCTACAAAAACTGGCTGGGTTTAATCA
AAGGTGATTTAAGCGCAAATTTCAGCAAAGACGGCGAGCAGATGACACGGCAGCTTAATCAGGACAAAGCCTTCATCGAC
AAAGACGGTGAGAAATATGTTGTTCACGGACGAGCCTTGCTACTAGTGCGTAATGTTGGTCACTTAATGGGCAGCGATTT
AATCCAGGACAGTGAGGGCAACAATGCTCCCGAAGGTATTATTGATGCTGCGATTACCGCGTTAATCGGCAGTATCGATT
TACAGGAAAAAACGAATAATAATATCCGCAATAGTCGTAGCGGCAGCATCTATATTGTTAAACCTAAAATGCATGGGCCG
GACGAAGTCGCTTTCACCTGTGACTTGTTCAGCCGCGTGGAAGAGATGCTTAAACTGCAGCCTAATACCATTAAACTGGG
CATTATGGATGAAGAACGCCGTACATCGGCAAATCTCAAAGAGTGTATTCGGGTAGCAAAATCACGGGTGGTCTTTATTA
ATACCGGTTTCTTAGACAGAACCGGTGATGAAATCCATACCAGTAAAGAAGCGGGTGCTGTTTATCCTAAAGCGCTGATC
AAAACCCTGCCCTGGTTTGATGCTTACGAAAATAACAATGTAGATGTTGGACTCGCCTGTGGATTCTCTGGAAAAGCGCA
GATTGGTAAAGGCATGTGGGCAATGCCCGATGAAATGAAAAAAATGATGAAGGAAAAAATTCAACATCCTTTATCGGGTG
CCAATACCGCTTGGGTACCGTCGCCTACCGCCGCGATATTACATGCTTTACATTATCACCAGGTGGATGTTTTTAAAGAA
CAGCTGAAAATAGCGAAGCGCCCGGCTGCCAAGCAGACGGATTTGTTAACTCTTCCTATTATGCCGAGTGATTATCCCTT
GTCGTTGGAAGAGATTGAAAAAGAGTTAGAAAACAATATTCAGGGCATTTTAGGTTACGTGGTGCGTTGGGTTGAAATGG
GGATAGGCTGTTCAAAAGTACCTGATATTAACAATGTCGGATTAATGGAGGATCGCGCTACCTTGCGTATTTCAAGTCAG
CATATTGCCAACTGGTTAAAACATAATATATGCAGCACTGAACAAGTAAATCGTATTATGCGCAATATGGCAGAAATTGT
AGATAAACAAAATGCAGGGGTATCTGGTTATCAGAACATGTCTCCTAATTATGAAACAAATTACGCATTTCAGGCCGCAG
AAGCGTTGATTTTTGAAGGTGAAGATCAACCCAATGGATATACAGAGCCGTTATTACATGAGTACAGAATGTTCGCAAAA
ATTTCCTAG

Upstream 100 bases:

>100_bases
TTCGAAATATAATCCAGATCACTTTTCTAAATTAATTGTCAATTTCAGTAAGTGATATGGCGTAGGATTAAGCGGTCAAA
TCAATAGAAGGAATGCAGCC

Downstream 100 bases:

>100_bases
AAATAATAGGTTTTAGGAATATTAATCTAACCACTAATTGATTCAACTACTGAGAGAGACGTTTATCATGAACTATAATA
CTGAAAAAACTAATGCTAGC

Product: malate synthase G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MNLPQQKQSEIESGFYNFINQEVLPHTNLNADDFWFDLMKLVNDFSPLNSQLLATRKTMQKQIDDWHRSHQNFDQQDYLK
FLEEIGYLVEQGESFNIETENVDSEISTLAGPQLVVPVQNARFALNAANARWGSLYDAYYGTDLIQKTGALKPGSDFNVA
RGQRVITLAKDFLDEVFPLDSGSHHDVLSYLVYYQHLLAFFPDGSKTGLKTPAQFIALDGSKSDPSYLLLKNNGLHIGIV
IDRHGKIGCSDLSGIDDIQVESALTTIIDFEDSISAVDAEDKVEAYKNWLGLIKGDLSANFSKDGEQMTRQLNQDKAFID
KDGEKYVVHGRALLLVRNVGHLMGSDLIQDSEGNNAPEGIIDAAITALIGSIDLQEKTNNNIRNSRSGSIYIVKPKMHGP
DEVAFTCDLFSRVEEMLKLQPNTIKLGIMDEERRTSANLKECIRVAKSRVVFINTGFLDRTGDEIHTSKEAGAVYPKALI
KTLPWFDAYENNNVDVGLACGFSGKAQIGKGMWAMPDEMKKMMKEKIQHPLSGANTAWVPSPTAAILHALHYHQVDVFKE
QLKIAKRPAAKQTDLLTLPIMPSDYPLSLEEIEKELENNIQGILGYVVRWVEMGIGCSKVPDINNVGLMEDRATLRISSQ
HIANWLKHNICSTEQVNRIMRNMAEIVDKQNAGVSGYQNMSPNYETNYAFQAAEALIFEGEDQPNGYTEPLLHEYRMFAK
IS

Sequences:

>Translated_722_residues
MNLPQQKQSEIESGFYNFINQEVLPHTNLNADDFWFDLMKLVNDFSPLNSQLLATRKTMQKQIDDWHRSHQNFDQQDYLK
FLEEIGYLVEQGESFNIETENVDSEISTLAGPQLVVPVQNARFALNAANARWGSLYDAYYGTDLIQKTGALKPGSDFNVA
RGQRVITLAKDFLDEVFPLDSGSHHDVLSYLVYYQHLLAFFPDGSKTGLKTPAQFIALDGSKSDPSYLLLKNNGLHIGIV
IDRHGKIGCSDLSGIDDIQVESALTTIIDFEDSISAVDAEDKVEAYKNWLGLIKGDLSANFSKDGEQMTRQLNQDKAFID
KDGEKYVVHGRALLLVRNVGHLMGSDLIQDSEGNNAPEGIIDAAITALIGSIDLQEKTNNNIRNSRSGSIYIVKPKMHGP
DEVAFTCDLFSRVEEMLKLQPNTIKLGIMDEERRTSANLKECIRVAKSRVVFINTGFLDRTGDEIHTSKEAGAVYPKALI
KTLPWFDAYENNNVDVGLACGFSGKAQIGKGMWAMPDEMKKMMKEKIQHPLSGANTAWVPSPTAAILHALHYHQVDVFKE
QLKIAKRPAAKQTDLLTLPIMPSDYPLSLEEIEKELENNIQGILGYVVRWVEMGIGCSKVPDINNVGLMEDRATLRISSQ
HIANWLKHNICSTEQVNRIMRNMAEIVDKQNAGVSGYQNMSPNYETNYAFQAAEALIFEGEDQPNGYTEPLLHEYRMFAK
IS
>Mature_722_residues
MNLPQQKQSEIESGFYNFINQEVLPHTNLNADDFWFDLMKLVNDFSPLNSQLLATRKTMQKQIDDWHRSHQNFDQQDYLK
FLEEIGYLVEQGESFNIETENVDSEISTLAGPQLVVPVQNARFALNAANARWGSLYDAYYGTDLIQKTGALKPGSDFNVA
RGQRVITLAKDFLDEVFPLDSGSHHDVLSYLVYYQHLLAFFPDGSKTGLKTPAQFIALDGSKSDPSYLLLKNNGLHIGIV
IDRHGKIGCSDLSGIDDIQVESALTTIIDFEDSISAVDAEDKVEAYKNWLGLIKGDLSANFSKDGEQMTRQLNQDKAFID
KDGEKYVVHGRALLLVRNVGHLMGSDLIQDSEGNNAPEGIIDAAITALIGSIDLQEKTNNNIRNSRSGSIYIVKPKMHGP
DEVAFTCDLFSRVEEMLKLQPNTIKLGIMDEERRTSANLKECIRVAKSRVVFINTGFLDRTGDEIHTSKEAGAVYPKALI
KTLPWFDAYENNNVDVGLACGFSGKAQIGKGMWAMPDEMKKMMKEKIQHPLSGANTAWVPSPTAAILHALHYHQVDVFKE
QLKIAKRPAAKQTDLLTLPIMPSDYPLSLEEIEKELENNIQGILGYVVRWVEMGIGCSKVPDINNVGLMEDRATLRISSQ
HIANWLKHNICSTEQVNRIMRNMAEIVDKQNAGVSGYQNMSPNYETNYAFQAAEALIFEGEDQPNGYTEPLLHEYRMFAK
IS

Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]

COG id: COG2225

COG function: function code C; Malate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malate synthase family. GlcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789348, Length=724, Percent_Identity=54.2817679558011, Blast_Score=795, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011076
- InterPro:   IPR001465
- InterPro:   IPR006253 [H]

Pfam domain/function: PF01274 Malate_synthase [H]

EC number: =2.3.3.9 [H]

Molecular weight: Translated: 80867; Mature: 80867

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPQQKQSEIESGFYNFINQEVLPHTNLNADDFWFDLMKLVNDFSPLNSQLLATRKTMQ
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KQIDDWHRSHQNFDQQDYLKFLEEIGYLVEQGESFNIETENVDSEISTLAGPQLVVPVQN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEEECC
ARFALNAANARWGSLYDAYYGTDLIQKTGALKPGSDFNVARGQRVITLAKDFLDEVFPLD
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
SGSHHDVLSYLVYYQHLLAFFPDGSKTGLKTPAQFIALDGSKSDPSYLLLKNNGLHIGIV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEEEE
IDRHGKIGCSDLSGIDDIQVESALTTIIDFEDSISAVDAEDKVEAYKNWLGLIKGDLSAN
EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
FSKDGEQMTRQLNQDKAFIDKDGEKYVVHGRALLLVRNVGHLMGSDLIQDSEGNNAPEGI
CCCCHHHHHHHHCCCCHHCCCCCCEEEEECCEEEHHHHHHHHHHHHHHCCCCCCCCCHHH
IDAAITALIGSIDLQEKTNNNIRNSRSGSIYIVKPKMHGPDEVAFTCDLFSRVEEMLKLQ
HHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCC
PNTIKLGIMDEERRTSANLKECIRVAKSRVVFINTGFLDRTGDEIHTSKEAGAVYPKALI
CCEEEEEECCHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCCCCCCHHHHH
KTLPWFDAYENNNVDVGLACGFSGKAQIGKGMWAMPDEMKKMMKEKIQHPLSGANTAWVP
HHCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SPTAAILHALHYHQVDVFKEQLKIAKRPAAKQTDLLTLPIMPSDYPLSLEEIEKELENNI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
QGILGYVVRWVEMGIGCSKVPDINNVGLMEDRATLRISSQHIANWLKHNICSTEQVNRIM
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHH
RNMAEIVDKQNAGVSGYQNMSPNYETNYAFQAAEALIFEGEDQPNGYTEPLLHEYRMFAK
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHC
IS
CC
>Mature Secondary Structure
MNLPQQKQSEIESGFYNFINQEVLPHTNLNADDFWFDLMKLVNDFSPLNSQLLATRKTMQ
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KQIDDWHRSHQNFDQQDYLKFLEEIGYLVEQGESFNIETENVDSEISTLAGPQLVVPVQN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEEECC
ARFALNAANARWGSLYDAYYGTDLIQKTGALKPGSDFNVARGQRVITLAKDFLDEVFPLD
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
SGSHHDVLSYLVYYQHLLAFFPDGSKTGLKTPAQFIALDGSKSDPSYLLLKNNGLHIGIV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEEEE
IDRHGKIGCSDLSGIDDIQVESALTTIIDFEDSISAVDAEDKVEAYKNWLGLIKGDLSAN
EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
FSKDGEQMTRQLNQDKAFIDKDGEKYVVHGRALLLVRNVGHLMGSDLIQDSEGNNAPEGI
CCCCHHHHHHHHCCCCHHCCCCCCEEEEECCEEEHHHHHHHHHHHHHHCCCCCCCCCHHH
IDAAITALIGSIDLQEKTNNNIRNSRSGSIYIVKPKMHGPDEVAFTCDLFSRVEEMLKLQ
HHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCC
PNTIKLGIMDEERRTSANLKECIRVAKSRVVFINTGFLDRTGDEIHTSKEAGAVYPKALI
CCEEEEEECCHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCCCCCCHHHHH
KTLPWFDAYENNNVDVGLACGFSGKAQIGKGMWAMPDEMKKMMKEKIQHPLSGANTAWVP
HHCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SPTAAILHALHYHQVDVFKEQLKIAKRPAAKQTDLLTLPIMPSDYPLSLEEIEKELENNI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
QGILGYVVRWVEMGIGCSKVPDINNVGLMEDRATLRISSQHIANWLKHNICSTEQVNRIM
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHH
RNMAEIVDKQNAGVSGYQNMSPNYETNYAFQAAEALIFEGEDQPNGYTEPLLHEYRMFAK
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHC
IS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA