Definition | Mycobacterium sp. KMS chromosome, complete genome. |
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Accession | NC_008705 |
Length | 5,737,227 |
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The map label for this gene is 119867001
Identifier: 119867001
GI number: 119867001
Start: 1032815
End: 1034062
Strand: Reverse
Name: 119867001
Synonym: Mkms_0949
Alternate gene names: NA
Gene position: 1034062-1032815 (Counterclockwise)
Preceding gene: 119867002
Following gene: 119866997
Centisome position: 18.02
GC content: 66.43
Gene sequence:
>1248_bases ATGACCGCACCCCACATTGTCGACCCTGCAGGCCTTCTTGGCGAAGCCCTCTCCGAAGCCTCGCCAGATCTGATGCGCTC GCTGCTGCAGACCGTGATCAACGCCCTGCTCTCGGCGGATGCTGATGCCGTGGTGGGCGCCGAATGGGGCCAGCCCACAC CAGGACGGCGGTCCCAGCGCAACGGGTATCGCCACCGCGGCCTGGACACCCGGGTGGGCACCATCGATGTCGCGGTTCCC AAGCTGCGCAAGGGAACCTACTTTCCCGACTGGCTGCTCGAACGCCGCAAGCGGGCCGAATCAGCGCTGATCACCGTGGT CGCCGACTGCTATTTGGCCGGGGTGAGCACGCGGCGGATGGACAAGTTGGTCAAGACCCTGGGCATCGATTCGCTGAGTA AATCGCAGGTCAGCCGCATGGCCACCGACCTCGACGAGCACGTCGAGCAGTTCCGCCACCGCCCCCTCGATTCTGCTGGC CCGTTCACCTTCGTCGCCGCGGACGCGTTGACGATGAAGGTGCGCGAAGGCGGGCGGGTGGTCAACGGGGTCGTGCTGCT GGCCACCGGCGTCAACGGCGACGGACACCGCGAAGTCCTGGGCATGCGCGTGGTCACCAGCGAGACTGGCCCGGCCTGGA ACGAGTTCTTCGCCGACCTGGTCGCCCGTGGACTGGCCGGCGTACGACTGGTCACCAGCGACGCCCACGCCGGCCTGCGC GAAGCGATCGCGGCCAACCTGCCCGGAGCGGCCTGGCAGCGGTGTCGCACCCACTACGCGGCCAACCTGATGAGCATCTG CCCCAAGAGCATGTGGCCGGCAGTCAAAGCGATGCTGCACAGCGTCTATGACCAACCTGACGCACCCGCGGTGGCCGCGC AATTCGACCGGCTCATCGACTACGTCACCGACAAACTGCCCGCCGTGGCCGAACACCTCAGTGCTGCACGCGAAGACATT CTGGCCTTCACCGCATTCCCCAAAGACGTCTGGACCCAGATCTGGTCCAACAACCCCGCCGAACGGCTCAACAAGGAGAT CCGCCGCCGCACCGACGCCGTGGGCATCTTCCCCAACCGCGACGCCATCGTCCGCCTCGTCGGCGCCGTCCTGGCCGAAC AGAACGACGAATGGGCCGAAGGACGCCGCTACCTCGGCCTCGACATCCTCGCCCGATGCCGCCTGACCACCATCACCAAC GACAATCCCGAAATAGGAGCCGACGACATGCCCGCACTCACCGCTTAA
Upstream 100 bases:
>100_bases CGCGGTTGCTGGGTTCGTCATCGTGTCGGTGATGGACGTAAAGCGGCCACCGCGTGATCCTTCGAGTCAACCTTCCACAG AATCCTCGAGGAGCATCACG
Downstream 100 bases:
>100_bases CCCACCGGATCACGCAGCACTACACCACTTCCCGGGACTTGACCGGACATCCCCGACCCGATTGGACACAGCGCTGAAGT CTTCGCGACAGTAGGAGCTC
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTAPHIVDPAGLLGEALSEASPDLMRSLLQTVINALLSADADAVVGAEWGQPTPGRRSQRNGYRHRGLDTRVGTIDVAVP KLRKGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRMDKLVKTLGIDSLSKSQVSRMATDLDEHVEQFRHRPLDSAG PFTFVAADALTMKVREGGRVVNGVVLLATGVNGDGHREVLGMRVVTSETGPAWNEFFADLVARGLAGVRLVTSDAHAGLR EAIAANLPGAAWQRCRTHYAANLMSICPKSMWPAVKAMLHSVYDQPDAPAVAAQFDRLIDYVTDKLPAVAEHLSAAREDI LAFTAFPKDVWTQIWSNNPAERLNKEIRRRTDAVGIFPNRDAIVRLVGAVLAEQNDEWAEGRRYLGLDILARCRLTTITN DNPEIGADDMPALTA
Sequences:
>Translated_415_residues MTAPHIVDPAGLLGEALSEASPDLMRSLLQTVINALLSADADAVVGAEWGQPTPGRRSQRNGYRHRGLDTRVGTIDVAVP KLRKGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRMDKLVKTLGIDSLSKSQVSRMATDLDEHVEQFRHRPLDSAG PFTFVAADALTMKVREGGRVVNGVVLLATGVNGDGHREVLGMRVVTSETGPAWNEFFADLVARGLAGVRLVTSDAHAGLR EAIAANLPGAAWQRCRTHYAANLMSICPKSMWPAVKAMLHSVYDQPDAPAVAAQFDRLIDYVTDKLPAVAEHLSAAREDI LAFTAFPKDVWTQIWSNNPAERLNKEIRRRTDAVGIFPNRDAIVRLVGAVLAEQNDEWAEGRRYLGLDILARCRLTTITN DNPEIGADDMPALTA >Mature_414_residues TAPHIVDPAGLLGEALSEASPDLMRSLLQTVINALLSADADAVVGAEWGQPTPGRRSQRNGYRHRGLDTRVGTIDVAVPK LRKGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRMDKLVKTLGIDSLSKSQVSRMATDLDEHVEQFRHRPLDSAGP FTFVAADALTMKVREGGRVVNGVVLLATGVNGDGHREVLGMRVVTSETGPAWNEFFADLVARGLAGVRLVTSDAHAGLRE AIAANLPGAAWQRCRTHYAANLMSICPKSMWPAVKAMLHSVYDQPDAPAVAAQFDRLIDYVTDKLPAVAEHLSAAREDIL AFTAFPKDVWTQIWSNNPAERLNKEIRRRTDAVGIFPNRDAIVRLVGAVLAEQNDEWAEGRRYLGLDILARCRLTTITND NPEIGADDMPALTA
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 45344; Mature: 45213
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPHIVDPAGLLGEALSEASPDLMRSLLQTVINALLSADADAVVGAEWGQPTPGRRSQR CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC NGYRHRGLDTRVGTIDVAVPKLRKGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRM CCCHHCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DKLVKTLGIDSLSKSQVSRMATDLDEHVEQFRHRPLDSAGPFTFVAADALTMKVREGGRV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCE VNGVVLLATGVNGDGHREVLGMRVVTSETGPAWNEFFADLVARGLAGVRLVTSDAHAGLR EEEEEEEEECCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHH EAIAANLPGAAWQRCRTHYAANLMSICPKSMWPAVKAMLHSVYDQPDAPAVAAQFDRLID HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH YVTDKLPAVAEHLSAAREDILAFTAFPKDVWTQIWSNNPAERLNKEIRRRTDAVGIFPNR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCH DAIVRLVGAVLAEQNDEWAEGRRYLGLDILARCRLTTITNDNPEIGADDMPALTA HHHHHHHHHHHHCCCCCHHHCCCEECHHHHHHHHEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TAPHIVDPAGLLGEALSEASPDLMRSLLQTVINALLSADADAVVGAEWGQPTPGRRSQR CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC NGYRHRGLDTRVGTIDVAVPKLRKGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRM CCCHHCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DKLVKTLGIDSLSKSQVSRMATDLDEHVEQFRHRPLDSAGPFTFVAADALTMKVREGGRV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCE VNGVVLLATGVNGDGHREVLGMRVVTSETGPAWNEFFADLVARGLAGVRLVTSDAHAGLR EEEEEEEEECCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHH EAIAANLPGAAWQRCRTHYAANLMSICPKSMWPAVKAMLHSVYDQPDAPAVAAQFDRLID HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH YVTDKLPAVAEHLSAAREDILAFTAFPKDVWTQIWSNNPAERLNKEIRRRTDAVGIFPNR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCH DAIVRLVGAVLAEQNDEWAEGRRYLGLDILARCRLTTITNDNPEIGADDMPALTA HHHHHHHHHHHHCCCCCHHHCCCEECHHHHHHHHEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]