Definition | Mycobacterium sp. KMS chromosome, complete genome. |
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Accession | NC_008705 |
Length | 5,737,227 |
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The map label for this gene is 119867002
Identifier: 119867002
GI number: 119867002
Start: 1034171
End: 1034545
Strand: Reverse
Name: 119867002
Synonym: Mkms_0950
Alternate gene names: NA
Gene position: 1034545-1034171 (Counterclockwise)
Preceding gene: 119867007
Following gene: 119867001
Centisome position: 18.03
GC content: 57.33
Gene sequence:
>375_bases ATGGCCTATGCTGCCCGGCAGGGCTTTTCAGATCTGTCGGTGTCCAGCGCGGGAACTCGGGCGGTGATCGGTCACCCGAT TCACCGCGACGCAGCGTTAGTTCTCCAGAGGCTTGGTGGCGATAGCTCCCACTTCATCGCGCGGCAAATCACGCCGAAAA TTGCTTCGAGTGCTGATCTCATACTCACTATGACAAGGGCGCATCGCGACGACGTGCTGGAATGTGCACCGCACAGGTTG CACAGAACGTTTACAATGATCGAAGCCTTCCTCTTAGCCACAGCGCACAACGCACGAACTGTTTCAAACCTCGCATCGCT TCGCCCGCAGGTGTCTACGGACGAGTCGTTGGACATCCAGTTGAGTCCCGCATAG
Upstream 100 bases:
>100_bases TGACCGTCAGACGAATTGAGTTTCAAGAGGAGTTGCCGTGCACATACTTTTTGTTTGCACTGGAAACATCTGTCGTTCAC CGACAGCGGCCCGCCTCGCA
Downstream 100 bases:
>100_bases TGGTGTAGCGCGGTTGCTGGGTTCGTCATCGTGTCGGTGATGGACGTAAAGCGGCCACCGCGTGATCCTTCGAGTCAACC TTCCACAGAATCCTCGAGGA
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine-Phosphatase; Protein-Tyrosine Phosphatase; Low Molecular Weight Phosphotyrosine Protein Phosphatase
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAYAARQGFSDLSVSSAGTRAVIGHPIHRDAALVLQRLGGDSSHFIARQITPKIASSADLILTMTRAHRDDVLECAPHRL HRTFTMIEAFLLATAHNARTVSNLASLRPQVSTDESLDIQLSPA
Sequences:
>Translated_124_residues MAYAARQGFSDLSVSSAGTRAVIGHPIHRDAALVLQRLGGDSSHFIARQITPKIASSADLILTMTRAHRDDVLECAPHRL HRTFTMIEAFLLATAHNARTVSNLASLRPQVSTDESLDIQLSPA >Mature_123_residues AYAARQGFSDLSVSSAGTRAVIGHPIHRDAALVLQRLGGDSSHFIARQITPKIASSADLILTMTRAHRDDVLECAPHRLH RTFTMIEAFLLATAHNARTVSNLASLRPQVSTDESLDIQLSPA
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13426; Mature: 13295
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAARQGFSDLSVSSAGTRAVIGHPIHRDAALVLQRLGGDSSHFIARQITPKIASSADL CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCE ILTMTRAHRDDVLECAPHRLHRTFTMIEAFLLATAHNARTVSNLASLRPQVSTDESLDIQ EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEE LSPA ECCC >Mature Secondary Structure AYAARQGFSDLSVSSAGTRAVIGHPIHRDAALVLQRLGGDSSHFIARQITPKIASSADL CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCE ILTMTRAHRDDVLECAPHRLHRTFTMIEAFLLATAHNARTVSNLASLRPQVSTDESLDIQ EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEE LSPA ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA