Definition | Mycobacterium sp. KMS chromosome, complete genome. |
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Accession | NC_008705 |
Length | 5,737,227 |
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The map label for this gene is 119866997
Identifier: 119866997
GI number: 119866997
Start: 1028214
End: 1029206
Strand: Reverse
Name: 119866997
Synonym: Mkms_0945
Alternate gene names: NA
Gene position: 1029206-1028214 (Counterclockwise)
Preceding gene: 119867001
Following gene: 119866995
Centisome position: 17.94
GC content: 61.63
Gene sequence:
>993_bases GTGTTCGGCAGACCGCAAATGCTGTGGACCACGCTGTCTGTGGCCGCTCTCGCTTCGTGCGTTTTTGTGCTCATCGTGCG CTTCATGCCACTACCCAACATCGTCGCCCTACTCGTATCCGTCGGAGCGCCGTACATTCCGGTAATAGCCCTAATGGGCT TGGCGCTATCGATGATCAGCCGACTAAGTGTCCTGTCCATTGCCGCGGTGGCCGTCTTCGCGGCTACCGTGGCGGTTCAG GTTCCCTGGTACTTCCTCGGTAGTCCTCCTTCTGTCGAACGACACACCGACATCCGTGTGCTCTCCTCAAACCTGCGCAA GAGCCGCGTTGAGCCAACCTCTTTCGTGAGACTGGCGAACAGAAGCGCGGATGTCATCACGGTGTCGGAGTTGACGCCCG AGGGGGTCCGACGCTTCGATCATGCCGGCCTGGGGGAGACGTTTCCCTACTCGGTACTCAAGCCTGCATCCGGTGCCGGC GGCATCGGTCTATGGAGCCGCTTCCCGCTAACCCCAAGCCCGCCTTCGAAGTACCGTGACACCACTATCGTCGCAGCAAA ACTGAAGATCCCCGGCGCGCGTTCCGATGCGTTGGTCGCCAGCGTGCACGTGACCTCTCCACTGTCGATTGGCTTGAACA TTTTCGACGACTGGCGTCGCGGCATCACAGGCCTCAAAGCCAGCCTTAACGACTTCGCCAAGACCGCCGGTGCCGGTGCC GTCATCGTCGCAGGCGACTTCAACAGCACACCGGACATGCGTCAGTTCCGCGACCTTCTGACCAACGGCTACCGCGACGC CGTCGAACAGACCGGAGCCGGTCTGGGTCCGACCTTCCCGTCCTACGGTTGGTTTCGGCCTCTCATCACCATCGACCATG TCCTCACCCGCAATGCCGCCGCCTCGTCCATCAAGACAGTCGACATGAAGGGCTCCGATCACCGCGCCCTCCTCGCCACG ATCAAGGTGCCACTCGACCCCACCGCCTCCTGA
Upstream 100 bases:
>100_bases GGCTCGGTCGTTGCCGAGCAGACTCTGCCTGAGTGGCAGTTACTCGAAACACTGATAACCTGCAAGCGATCCGGACTCGA GGGAGGGAGGAGCCTTTCTC
Downstream 100 bases:
>100_bases CGAGCAGCGAAAACGCTTAGACAGGTCAACCAGTTGCTCTACCGTCCGACCGACATGCTGGACATTACGCCGAGCGAACG CTCGGCATGAACCGCACATA
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Integral Membrane Protein; Endonuclease/Exonuclease/Phosphatase Family Protein; Phosphatase; Endonuclease/CDSuclease/Phosphatase; Metal-Dependent Hydrolase-Like Protein; Transmembrane Protein
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MFGRPQMLWTTLSVAALASCVFVLIVRFMPLPNIVALLVSVGAPYIPVIALMGLALSMISRLSVLSIAAVAVFAATVAVQ VPWYFLGSPPSVERHTDIRVLSSNLRKSRVEPTSFVRLANRSADVITVSELTPEGVRRFDHAGLGETFPYSVLKPASGAG GIGLWSRFPLTPSPPSKYRDTTIVAAKLKIPGARSDALVASVHVTSPLSIGLNIFDDWRRGITGLKASLNDFAKTAGAGA VIVAGDFNSTPDMRQFRDLLTNGYRDAVEQTGAGLGPTFPSYGWFRPLITIDHVLTRNAAASSIKTVDMKGSDHRALLAT IKVPLDPTAS
Sequences:
>Translated_330_residues MFGRPQMLWTTLSVAALASCVFVLIVRFMPLPNIVALLVSVGAPYIPVIALMGLALSMISRLSVLSIAAVAVFAATVAVQ VPWYFLGSPPSVERHTDIRVLSSNLRKSRVEPTSFVRLANRSADVITVSELTPEGVRRFDHAGLGETFPYSVLKPASGAG GIGLWSRFPLTPSPPSKYRDTTIVAAKLKIPGARSDALVASVHVTSPLSIGLNIFDDWRRGITGLKASLNDFAKTAGAGA VIVAGDFNSTPDMRQFRDLLTNGYRDAVEQTGAGLGPTFPSYGWFRPLITIDHVLTRNAAASSIKTVDMKGSDHRALLAT IKVPLDPTAS >Mature_330_residues MFGRPQMLWTTLSVAALASCVFVLIVRFMPLPNIVALLVSVGAPYIPVIALMGLALSMISRLSVLSIAAVAVFAATVAVQ VPWYFLGSPPSVERHTDIRVLSSNLRKSRVEPTSFVRLANRSADVITVSELTPEGVRRFDHAGLGETFPYSVLKPASGAG GIGLWSRFPLTPSPPSKYRDTTIVAAKLKIPGARSDALVASVHVTSPLSIGLNIFDDWRRGITGLKASLNDFAKTAGAGA VIVAGDFNSTPDMRQFRDLLTNGYRDAVEQTGAGLGPTFPSYGWFRPLITIDHVLTRNAAASSIKTVDMKGSDHRALLAT IKVPLDPTAS
Specific function: Unknown
COG id: COG3021
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35240; Mature: 35240
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRPQMLWTTLSVAALASCVFVLIVRFMPLPNIVALLVSVGAPYIPVIALMGLALSMIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RLSVLSIAAVAVFAATVAVQVPWYFLGSPPSVERHTDIRVLSSNLRKSRVEPTSFVRLAN HHHHHHHHHHHHHHHHHHHEECEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHC RSADVITVSELTPEGVRRFDHAGLGETFPYSVLKPASGAGGIGLWSRFPLTPSPPSKYRD CCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTIVAAKLKIPGARSDALVASVHVTSPLSIGLNIFDDWRRGITGLKASLNDFAKTAGAGA CEEEEEEEECCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VIVAGDFNSTPDMRQFRDLLTNGYRDAVEQTGAGLGPTFPSYGWFRPLITIDHVLTRNAA EEEECCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH ASSIKTVDMKGSDHRALLATIKVPLDPTAS HHCEEEEECCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MFGRPQMLWTTLSVAALASCVFVLIVRFMPLPNIVALLVSVGAPYIPVIALMGLALSMIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RLSVLSIAAVAVFAATVAVQVPWYFLGSPPSVERHTDIRVLSSNLRKSRVEPTSFVRLAN HHHHHHHHHHHHHHHHHHHEECEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHC RSADVITVSELTPEGVRRFDHAGLGETFPYSVLKPASGAGGIGLWSRFPLTPSPPSKYRD CCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTIVAAKLKIPGARSDALVASVHVTSPLSIGLNIFDDWRRGITGLKASLNDFAKTAGAGA CEEEEEEEECCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VIVAGDFNSTPDMRQFRDLLTNGYRDAVEQTGAGLGPTFPSYGWFRPLITIDHVLTRNAA EEEECCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH ASSIKTVDMKGSDHRALLATIKVPLDPTAS HHCEEEEECCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA