| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is tam [C]
Identifier: 119776444
GI number: 119776444
Start: 3942137
End: 3942772
Strand: Direct
Name: tam [C]
Synonym: Sama_3312
Alternate gene names: 119776444
Gene position: 3942137-3942772 (Clockwise)
Preceding gene: 119776443
Following gene: 119776448
Centisome position: 91.55
GC content: 57.39
Gene sequence:
>636_bases ATGTCAGGCCACATCAGCGCCGCCGAAACCGCGCAAACCGTTACCACCTTCGACAAACATGCCAGGGCCTACAAAGACGC CTTTGTGGCACTGCCAGCTTACCTCGCCACCTTCGATGTACTGGCCGATATGATGTGTTCTGGCCACACGCGCTTGTTGG ATTTAGCCTGCGGCCCGGGTACCTTGAGCCTGCATCTCAAGTCACGTTTCCCCCACCTTGCCATCACGGGTACCGACTTA TCGCCACGTATGCTGTCGCTGGCCAAAGCCGCGCTGCCCGATGGCGAGTTCCATTGTCTTGATCTTCGCGATACCTCACG GCTTGCGGGCGAGTTTGACGTAATTGCCTGTGCCTTTGGTTTGCCTTATCTCGATAGCCAAAGCGCCGCGCAGTTGTTAC AGGACTGCGCCGCCAAACTGGCGAAGGGAGGCCTTATGTATCTGAGTTTTATCGAGTGCGACACCACTCCCCACAGCCAA ACCAACAGCCACGGCGACAGCGTGTGGCGTCAGGGCCACACTGCCGAGGGCATAGACTCGCAACTGAGTGCGCAGGGACT TAAGCCGCTGTGGCAGCATCACACAGTAACCCGCGGCGAAACCGAGCACTTTGTAATCGCCATTAAAGGCGAATAA
Upstream 100 bases:
>100_bases CGGTCTTTTTTTATTGCTTACGTTTTGCACTCAAGCCTTTAAGCACCATGCTGACAAAGGCAAAACCGCGAATGGAGCCG CATCAGCTAGGGAGCACATT
Downstream 100 bases:
>100_bases AAAAAGCCGGTCGGTGACCGGCATTTTTAACTCTAAGGCTAAGGCTTACTTACAGTTACGGCCCTTACAGGTACCGCCTG TATTGCCGCCGCCGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase; Methyltransferase; Methyltransferase Domain Family
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPGTLSLHLKSRFPHLAITGTDL SPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQ TNSHGDSVWRQGHTAEGIDSQLSAQGLKPLWQHHTVTRGETEHFVIAIKGE
Sequences:
>Translated_211_residues MSGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPGTLSLHLKSRFPHLAITGTDL SPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQ TNSHGDSVWRQGHTAEGIDSQLSAQGLKPLWQHHTVTRGETEHFVIAIKGE >Mature_210_residues SGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPGTLSLHLKSRFPHLAITGTDLS PRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQT NSHGDSVWRQGHTAEGIDSQLSAQGLKPLWQHHTVTRGETEHFVIAIKGE
Specific function: Catalyzes The S-Adenosylmethionine Monomethyl Esterification Of Trans-Aconitate At High Affinity And Of Cis- Aconitate, Isocitrate, And Citrate At Lower Velocities And Affinities. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.144 [C]
Molecular weight: Translated: 22781; Mature: 22650
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC TLSLHLKSRFPHLAITGTDLSPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFG EEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHEEEEECC LPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQTNSHGDSVWRQGHTAEGIDS CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCHH QLSAQGLKPLWQHHTVTRGETEHFVIAIKGE HHHHHCCCHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure SGHISAAETAQTVTTFDKHARAYKDAFVALPAYLATFDVLADMMCSGHTRLLDLACGPG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC TLSLHLKSRFPHLAITGTDLSPRMLSLAKAALPDGEFHCLDLRDTSRLAGEFDVIACAFG EEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHEEEEECC LPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQTNSHGDSVWRQGHTAEGIDS CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCHH QLSAQGLKPLWQHHTVTRGETEHFVIAIKGE HHHHHCCCHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA