Click here to switch to the map view.

The map label for this gene is yacH [H]

Identifier: 119776443

GI number: 119776443

Start: 3940525

End: 3941976

Strand: Direct

Name: yacH [H]

Synonym: Sama_3311

Alternate gene names: 119776443

Gene position: 3940525-3941976 (Clockwise)

Preceding gene: 119776441

Following gene: 119776444

Centisome position: 91.51

GC content: 60.67

Gene sequence:

>1452_bases
ATGAACAGGTCTATCAGAATACAACTTGTGTCGGCCCTGATGTGTTTGCCCCTGTTTTCCGGCTGCACCTCGGTGGCCCA
GGCTGAGCCGAGTGAATACAGCAGCAGTATCCGCGCCGAGCGCTTCAGCGAAGCTGAGCTGGCACGGCTGCTGGCACCCA
TTGCCCTTTACCCAGATACCCTGCTGACCCATATCCTGATTGCCTCCAGCTATCCGCTGGAAGTGGTGGAAGCCCAACGC
TGGCGCGAGAAAAATCGCAAGCTTGGCGATAAGAAGCTGATGGATAAGGCCGAGAAGCAGGGCTGGGATCCCAGCGTCAC
CGCGCTGATTGCCTTCCCCAATGTGCTGGAGCGCATGAGTGATGACCTCAACTGGACACGGGATCTGGGGGATGCCTTCC
TCGCCGATGAAGAGGCGGTGCTGGACAGCATACAGATGCTGCGCCGGGAGGCCGACCGCGCCGGTAATCTGGACGGCGGC
GATAATCTGGTGGTGAAACGCCAGCCGACGCAAATCATTATCGAGTCGCCCAGCCCTGAAATCATCTATGTGCCTTACTA
CGACCCACGCGTGGTGTATGGTCACTGGCGCTGGAACCGCTATCCACCTGTGTACTGGGCGCCCTTCCCCGGCTATGTGA
GCTACCATCGTCACTTTGGCTGGCATTCGGGTATCAGCATCTCCTTTAACTTTTACTTTTCCAATTTCCATTGGTACGAC
AGACACGTGATAGTGCATCACCATCATCACTATCGCCGCCCACCGGAGCCAAGGTACGCCATCAGCCAGGGCGCCCAGCG
CTGGCGCCATGACCCGGGCCATCGCCACGGTGTGGCCTACCGCAGCGCCGATGTCCGTCAGCGCTTTAATGTGAGCACGC
CCAGCCGGATTGAGCGCGACCACAGACGCCATGATGAGTACAGCCGCGTTGTGTCGCAGCAGCACAATCCACAGGTACGC
TCACGTGAGCTCAGCCAAAGCCGCGAGCAGGAGTTCAAGGCCCGTATGAACAGCAGCGAACGCCGCTTTGAAAACAATGG
CAACAGTTCCCGTGAACGGGACGTGGGCAATAGCTCCCGCGAGCGGGACATGGGCCATCAATCCCATGACCGTGAGTTGC
GTCAGCAGCTGAACAGCCGTGAGCGGGCAGACAGCCGTGAGCGCATGGACAATCGTGAACGCATGGAGAGCCGTGAGCGC
AGCCAGCCGCAACAGCGTGGATTCGAGCAGCGCGAACCGCAGCGCGAGCGCCAGCAGTTCCAGGAGCGTCAACGTGATGC
TCAGCCAGCCCAGCCACGGGAGCAACAAGTCCAGCGTGAACGCCAGCGCGAGGCGCAGCACGATGCCCGCCAGCAACGTC
AACAGCCCCGCGAGCATCAGCAGCCCCAGCGGGAACGCCCTCAGCCACAGCGCGAGCGTCACAACGACCATCCCCGCGAG
CGCAACCTCTAA

Upstream 100 bases:

>100_bases
TCTGCACTCAGAATACACTCTTCAGCCTTCGTTCATCTTCGGCCATGTAGCCTGTAATCAAACTGGCATCATGCCCGTGT
GAAACAATCAAGGAGGCCCT

Downstream 100 bases:

>100_bases
CCGGGCCATATCCAATTGCCAGACCACTGAAAATATGCCAAAAACAAAGACCGGCCCTGCCGGTCTTTTTTTATTGCTTA
CGTTTTGCACTCAAGCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MNRSIRIQLVSALMCLPLFSGCTSVAQAEPSEYSSSIRAERFSEAELARLLAPIALYPDTLLTHILIASSYPLEVVEAQR
WREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMSDDLNWTRDLGDAFLADEEAVLDSIQMLRREADRAGNLDGG
DNLVVKRQPTQIIIESPSPEIIYVPYYDPRVVYGHWRWNRYPPVYWAPFPGYVSYHRHFGWHSGISISFNFYFSNFHWYD
RHVIVHHHHHYRRPPEPRYAISQGAQRWRHDPGHRHGVAYRSADVRQRFNVSTPSRIERDHRRHDEYSRVVSQQHNPQVR
SRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSRERDMGHQSHDRELRQQLNSRERADSRERMDNRERMESRER
SQPQQRGFEQREPQRERQQFQERQRDAQPAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRE
RNL

Sequences:

>Translated_483_residues
MNRSIRIQLVSALMCLPLFSGCTSVAQAEPSEYSSSIRAERFSEAELARLLAPIALYPDTLLTHILIASSYPLEVVEAQR
WREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMSDDLNWTRDLGDAFLADEEAVLDSIQMLRREADRAGNLDGG
DNLVVKRQPTQIIIESPSPEIIYVPYYDPRVVYGHWRWNRYPPVYWAPFPGYVSYHRHFGWHSGISISFNFYFSNFHWYD
RHVIVHHHHHYRRPPEPRYAISQGAQRWRHDPGHRHGVAYRSADVRQRFNVSTPSRIERDHRRHDEYSRVVSQQHNPQVR
SRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSRERDMGHQSHDRELRQQLNSRERADSRERMDNRERMESRER
SQPQQRGFEQREPQRERQQFQERQRDAQPAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRE
RNL
>Mature_483_residues
MNRSIRIQLVSALMCLPLFSGCTSVAQAEPSEYSSSIRAERFSEAELARLLAPIALYPDTLLTHILIASSYPLEVVEAQR
WREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMSDDLNWTRDLGDAFLADEEAVLDSIQMLRREADRAGNLDGG
DNLVVKRQPTQIIIESPSPEIIYVPYYDPRVVYGHWRWNRYPPVYWAPFPGYVSYHRHFGWHSGISISFNFYFSNFHWYD
RHVIVHHHHHYRRPPEPRYAISQGAQRWRHDPGHRHGVAYRSADVRQRFNVSTPSRIERDHRRHDEYSRVVSQQHNPQVR
SRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSRERDMGHQSHDRELRQQLNSRERADSRERMDNRERMESRER
SQPQQRGFEQREPQRERQQFQERQRDAQPAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRE
RNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786308, Length=568, Percent_Identity=27.2887323943662, Blast_Score=166, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021728 [H]

Pfam domain/function: PF11737 DUF3300 [H]

EC number: NA

Molecular weight: Translated: 57796; Mature: 57796

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSIRIQLVSALMCLPLFSGCTSVAQAEPSEYSSSIRAERFSEAELARLLAPIALYPDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLTHILIASSYPLEVVEAQRWREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMS
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DDLNWTRDLGDAFLADEEAVLDSIQMLRREADRAGNLDGGDNLVVKRQPTQIIIESPSPE
HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCC
IIYVPYYDPRVVYGHWRWNRYPPVYWAPFPGYVSYHRHFGWHSGISISFNFYFSNFHWYD
EEEEECCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEEEECCEEEEC
RHVIVHHHHHYRRPPEPRYAISQGAQRWRHDPGHRHGVAYRSADVRQRFNVSTPSRIERD
CEEEEECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHH
HRRHDEYSRVVSQQHNPQVRSRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCHH
ERDMGHQSHDRELRQQLNSRERADSRERMDNRERMESRERSQPQQRGFEQREPQRERQQF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHCCHHHHHHHH
QERQRDAQPAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHCCCCCCC
RNL
CCC
>Mature Secondary Structure
MNRSIRIQLVSALMCLPLFSGCTSVAQAEPSEYSSSIRAERFSEAELARLLAPIALYPDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLTHILIASSYPLEVVEAQRWREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMS
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DDLNWTRDLGDAFLADEEAVLDSIQMLRREADRAGNLDGGDNLVVKRQPTQIIIESPSPE
HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCC
IIYVPYYDPRVVYGHWRWNRYPPVYWAPFPGYVSYHRHFGWHSGISISFNFYFSNFHWYD
EEEEECCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEEEECCEEEEC
RHVIVHHHHHYRRPPEPRYAISQGAQRWRHDPGHRHGVAYRSADVRQRFNVSTPSRIERD
CEEEEECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHH
HRRHDEYSRVVSQQHNPQVRSRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCHH
ERDMGHQSHDRELRQQLNSRERADSRERMDNRERMESRERSQPQQRGFEQREPQRERQQF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHCCHHHHHHHH
QERQRDAQPAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHCCCCCCC
RNL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]