Click here to switch to the map view.

The map label for this gene is rof [C]

Identifier: 119776448

GI number: 119776448

Start: 3946825

End: 3947085

Strand: Direct

Name: rof [C]

Synonym: Sama_3316

Alternate gene names: 119776448

Gene position: 3946825-3947085 (Clockwise)

Preceding gene: 119776444

Following gene: 119776451

Centisome position: 91.66

GC content: 59.0

Gene sequence:

>261_bases
ATGCAAGATTATCAACGTATTGCCTGCGACCGCTATGATGTGCTGGAACTGGCCTGTATCCGCAGGTATCCGCTGCTGCT
GGAGCTCAAAGATGAGGGGCGCATTCACGGGCGGGCGGTGACCACAGAGACCCGCGCCGACAAGAGCGAGTGGCTGCTGA
TAGAAACCGCCACTTCCCACAGGGCCATCAGACTCGACCGCATCATCGCCATCACCCCGGATATCGAGGGCGCCGAGTTC
GGTCGGGTACTGATAGGTTAA

Upstream 100 bases:

>100_bases
CCGCCCCGCAGCGGATTTCAGCGGCTGACTTGAAAAATACGTTTAACTCACTAAGGTTAAATCGACGCCGTCTGCCACCA
GATGCTATTCATGGAGTTTT

Downstream 100 bases:

>100_bases
CTTCAGGCCTTCTGGGCCGCGACCACAGAAATTTCTACCAGATACTCGGGCTCGGCGATGGCGGCTTCCACACAGGCCCT
TGCCGGGGCATGCCCTTTGG

Product: transcriptional antiterminator, Rof

Products: NA

Alternate protein names: Transcriptional Antiterminator; Modulator Of Rho-Dependent Transcription Termination

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MQDYQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSHRAIRLDRIIAITPDIEGAEF
GRVLIG

Sequences:

>Translated_86_residues
MQDYQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSHRAIRLDRIIAITPDIEGAEF
GRVLIG
>Mature_86_residues
MQDYQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSHRAIRLDRIIAITPDIEGAEF
GRVLIG

Specific function: Suppresses Temperature-Sensitive Mutations In Essential Genes By Modulating Rho-Dependent Transcription Termination. [C]

COG id: COG4568

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9912; Mature: 9912

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDYQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSH
CCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCC
RAIRLDRIIAITPDIEGAEFGRVLIG
CEEEEEEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure
MQDYQRIACDRYDVLELACIRRYPLLLELKDEGRIHGRAVTTETRADKSEWLLIETATSH
CCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCC
RAIRLDRIIAITPDIEGAEFGRVLIG
CEEEEEEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA