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The map label for this gene is ybeF [C]

Identifier: 119776032

GI number: 119776032

Start: 3448189

End: 3449163

Strand: Reverse

Name: ybeF [C]

Synonym: Sama_2900

Alternate gene names: 119776032

Gene position: 3449163-3448189 (Counterclockwise)

Preceding gene: 119776037

Following gene: 119776030

Centisome position: 80.1

GC content: 54.15

Gene sequence:

>975_bases
ATGAAAAATATGACTCTGGATAGTTTAGATATGCTGAGTGCCAATATATTAGTTAATTTGTATGAAAAGCATTCGGCTTC
GTCAGTGGCGATGGAGATGAATATACCCGCCCCCAAAGTGAGCCGCTGCTTACAACATGCGCGGATGATCTTTAACGATC
CCCTGTTTATCCGTAAGAAGCATGGCCTCGAACCCAATGAATTTACCCGCCAACTCTATCCCTTGGTCAAAGCCCTGGTG
CAGTGCGGTGAACAGCTGCAACAGCTGGAGAGTTGCCACGATCTGGCCGCGAGCCAGGTGATGGTGCTCTATGTGAGCGA
CCTCCTGATAGCCGAACTGCCCCAGCGCCTGAGCAGCGCCATCAGTGAGGCGCAGCTGCCCATTAGCTATGAGCTGCGCA
CCGGCTCTGTGGATCTGGTGGAAGATCTGGCTCAGGGACTGGTTGACCTGGCCATTGTCAGTGAATCCTCTGACAGGGCA
CTGCAAGACGACAGACTCATTGTGTCTCCGTTGACTGAATTAACCCATCTGTATCTGCTTTGCTCCCACAAGCATCCGCT
GTTGCAGCAGGAGATAAGCCTCGGCAACATCGCCAATTATCCCTACCTGAGCGCTTTCGGTCAGCTGGACAAACAGGCAC
CGGATCCTTTCCAGCGCTACTGTGCCCAGCAGCGGCTCAGTTGCCATCTGGCACCGGTGGAATTGGGCCGTGAGGGGCTG
GCGTTTCATCAGTTGTATCGTTATCTGTCTGACGATAAGACGGTGAGTCTGCTGCCATACAGCAGGGTGTATGAGCACAG
TGAGCAGCTTCCCGGTTTGCACGTGTGCTGCCTGTCGGGCATGGATACCGCGCGTCTTTATCGGGATCAGCCCTATCCCC
GGCTCTATATGCTGAGCCGCAGTGGTCGTGGTGGTGCGCATCTCGAGTGGATGAAGCAGGAGATAGGCCAGCTTATCAAG
CAGAACGTGCATTAG

Upstream 100 bases:

>100_bases
TTTTGTTTGTTTTATTAAATTAGAATAAATGTATTGTCAGCATAAATATATTTACTATACTCCCAATGGGTATATTCAAT
GTCGGGAGAGGTATTTTGAA

Downstream 100 bases:

>100_bases
CACAGGCATCCAGCTGTCAGCGGGTTCATGTGGCTTGTCGGGTTTGCGCCTGGCTTGAGCCTTGGGCTAAAGGCGCTGGC
TAAAGGGTCGGCAAGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator-Like Protein; Transcriptional Regulator LysR Family; Transcriptional Regulator LysR Family Protein; Regulatory Protein LysR

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKNMTLDSLDMLSANILVNLYEKHSASSVAMEMNIPAPKVSRCLQHARMIFNDPLFIRKKHGLEPNEFTRQLYPLVKALV
QCGEQLQQLESCHDLAASQVMVLYVSDLLIAELPQRLSSAISEAQLPISYELRTGSVDLVEDLAQGLVDLAIVSESSDRA
LQDDRLIVSPLTELTHLYLLCSHKHPLLQQEISLGNIANYPYLSAFGQLDKQAPDPFQRYCAQQRLSCHLAPVELGREGL
AFHQLYRYLSDDKTVSLLPYSRVYEHSEQLPGLHVCCLSGMDTARLYRDQPYPRLYMLSRSGRGGAHLEWMKQEIGQLIK
QNVH

Sequences:

>Translated_324_residues
MKNMTLDSLDMLSANILVNLYEKHSASSVAMEMNIPAPKVSRCLQHARMIFNDPLFIRKKHGLEPNEFTRQLYPLVKALV
QCGEQLQQLESCHDLAASQVMVLYVSDLLIAELPQRLSSAISEAQLPISYELRTGSVDLVEDLAQGLVDLAIVSESSDRA
LQDDRLIVSPLTELTHLYLLCSHKHPLLQQEISLGNIANYPYLSAFGQLDKQAPDPFQRYCAQQRLSCHLAPVELGREGL
AFHQLYRYLSDDKTVSLLPYSRVYEHSEQLPGLHVCCLSGMDTARLYRDQPYPRLYMLSRSGRGGAHLEWMKQEIGQLIK
QNVH
>Mature_324_residues
MKNMTLDSLDMLSANILVNLYEKHSASSVAMEMNIPAPKVSRCLQHARMIFNDPLFIRKKHGLEPNEFTRQLYPLVKALV
QCGEQLQQLESCHDLAASQVMVLYVSDLLIAELPQRLSSAISEAQLPISYELRTGSVDLVEDLAQGLVDLAIVSESSDRA
LQDDRLIVSPLTELTHLYLLCSHKHPLLQQEISLGNIANYPYLSAFGQLDKQAPDPFQRYCAQQRLSCHLAPVELGREGL
AFHQLYRYLSDDKTVSLLPYSRVYEHSEQLPGLHVCCLSGMDTARLYRDQPYPRLYMLSRSGRGGAHLEWMKQEIGQLIK
QNVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36688; Mature: 36688

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMTLDSLDMLSANILVNLYEKHSASSVAMEMNIPAPKVSRCLQHARMIFNDPLFIRKK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECC
HGLEPNEFTRQLYPLVKALVQCGEQLQQLESCHDLAASQVMVLYVSDLLIAELPQRLSSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISEAQLPISYELRTGSVDLVEDLAQGLVDLAIVSESSDRALQDDRLIVSPLTELTHLYLL
HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
CSHKHPLLQQEISLGNIANYPYLSAFGQLDKQAPDPFQRYCAQQRLSCHLAPVELGREGL
HCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEECCHHHHCCCHH
AFHQLYRYLSDDKTVSLLPYSRVYEHSEQLPGLHVCCLSGMDTARLYRDQPYPRLYMLSR
HHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCEEEEEEC
SGRGGAHLEWMKQEIGQLIKQNVH
CCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNMTLDSLDMLSANILVNLYEKHSASSVAMEMNIPAPKVSRCLQHARMIFNDPLFIRKK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECC
HGLEPNEFTRQLYPLVKALVQCGEQLQQLESCHDLAASQVMVLYVSDLLIAELPQRLSSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISEAQLPISYELRTGSVDLVEDLAQGLVDLAIVSESSDRALQDDRLIVSPLTELTHLYLL
HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
CSHKHPLLQQEISLGNIANYPYLSAFGQLDKQAPDPFQRYCAQQRLSCHLAPVELGREGL
HCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEECCHHHHCCCHH
AFHQLYRYLSDDKTVSLLPYSRVYEHSEQLPGLHVCCLSGMDTARLYRDQPYPRLYMLSR
HHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCEEEEEEC
SGRGGAHLEWMKQEIGQLIKQNVH
CCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA