Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776037

Identifier: 119776037

GI number: 119776037

Start: 3453033

End: 3454031

Strand: Reverse

Name: 119776037

Synonym: Sama_2905

Alternate gene names: NA

Gene position: 3454031-3453033 (Counterclockwise)

Preceding gene: 119776038

Following gene: 119776032

Centisome position: 80.21

GC content: 36.04

Gene sequence:

>999_bases
TTGGCATGGCCGAAAGGCCCCATTTTGCCTCAAATGGATCTCTTGAAGCTTACCAACAAACACTGTACATACCCGTCATC
GCGCCAGAGAGCAGGCTCGACAGGGTATTGGCATTTTGTTTGTCTCAAAAAGTGTTTAGGATGTCCTGTTATTTGGTTAT
TTGATATGAAGATGCAAGACAGGGATTATGATATGAGAATAGTTTTGGCTTTTATGCTAATCAGCTTGATTATTGTACGG
TTAGCTCATGCGGATGAACTCCAGGTAAATGAAATGGATAATCACAAACTGCTTGATTTGGTTACTGCTACAATTCAAAA
TAATGATGTTGATGAAAAAGAAAAAAATTTTGTATACAAAAGCTTGAATGCTATTGCCAAGCAATATCCAGCGGAGGTTA
ACTATTTGCTGGGACAAATTTTTTATTTTGGAATATTTGAGAATAGAAATCTTGAAAAAGCTATAAATTATCTAACTATT
TCCTCTGAGTTGAATGATACTAGAGCTCAATATTTGTTAGGGACAATCCTTGCAATGGAGCAGGGATATGTCCATTATGA
ACAAGCTATACCACTATTGGAAAAAGCAGCAGCAGATGGTATTCCTGATGCAATGCATAATTTATACATCCTATATCGGA
AAGAGAAATACCCAAAAGATCTAGCCATAGAGTGGCTAAAAAAAGCTGCGAATATAAAATTTGAACCGGCAATGTTTTTT
TTGAAGCGAGAAGAATATTTGGCCGCACTGGAATCAAATGATAAGGAGAAATTGGAAGAGATAGCAAAGTATCTAATTTC
TGAGAGATTTGAAAGCCTTTCTGGAGAAAGATACTTCTTGTTGGCAAAAATATATAATAGTTCATCACCATTAAGTGATG
ATGATTTAAGACTCAAGTATCTGCAATTGTCGGCTGATGAAGGATTCGACTTGGCTATAAACATCTTAAGTAATTATAAT
AGACTTGTGGAGCAACAAGTCAAAGAGGGTGGGAATTAG

Upstream 100 bases:

>100_bases
GCGGCAAATGGTGTAGAGGAAAGCAGCAAAGCGCGTCGATACATCCAGACTAATCAAGCCTGGTATATTCCACGTTTCCC
CTGCTGGCTCGAACCAGAAT

Downstream 100 bases:

>100_bases
TGAATGAATCAACGCTAACTTTCAAAAATGTATTGGTCGAGACTTGATCTGAAACCTCATTTTTAAAAGGTGAGAGTTAC
CCGTTTTGATAAGGGTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MAWPKGPILPQMDLLKLTNKHCTYPSSRQRAGSTGYWHFVCLKKCLGCPVIWLFDMKMQDRDYDMRIVLAFMLISLIIVR
LAHADELQVNEMDNHKLLDLVTATIQNNDVDEKEKNFVYKSLNAIAKQYPAEVNYLLGQIFYFGIFENRNLEKAINYLTI
SSELNDTRAQYLLGTILAMEQGYVHYEQAIPLLEKAAADGIPDAMHNLYILYRKEKYPKDLAIEWLKKAANIKFEPAMFF
LKREEYLAALESNDKEKLEEIAKYLISERFESLSGERYFLLAKIYNSSSPLSDDDLRLKYLQLSADEGFDLAINILSNYN
RLVEQQVKEGGN

Sequences:

>Translated_332_residues
MAWPKGPILPQMDLLKLTNKHCTYPSSRQRAGSTGYWHFVCLKKCLGCPVIWLFDMKMQDRDYDMRIVLAFMLISLIIVR
LAHADELQVNEMDNHKLLDLVTATIQNNDVDEKEKNFVYKSLNAIAKQYPAEVNYLLGQIFYFGIFENRNLEKAINYLTI
SSELNDTRAQYLLGTILAMEQGYVHYEQAIPLLEKAAADGIPDAMHNLYILYRKEKYPKDLAIEWLKKAANIKFEPAMFF
LKREEYLAALESNDKEKLEEIAKYLISERFESLSGERYFLLAKIYNSSSPLSDDDLRLKYLQLSADEGFDLAINILSNYN
RLVEQQVKEGGN
>Mature_331_residues
AWPKGPILPQMDLLKLTNKHCTYPSSRQRAGSTGYWHFVCLKKCLGCPVIWLFDMKMQDRDYDMRIVLAFMLISLIIVRL
AHADELQVNEMDNHKLLDLVTATIQNNDVDEKEKNFVYKSLNAIAKQYPAEVNYLLGQIFYFGIFENRNLEKAINYLTIS
SELNDTRAQYLLGTILAMEQGYVHYEQAIPLLEKAAADGIPDAMHNLYILYRKEKYPKDLAIEWLKKAANIKFEPAMFFL
KREEYLAALESNDKEKLEEIAKYLISERFESLSGERYFLLAKIYNSSSPLSDDDLRLKYLQLSADEGFDLAINILSNYNR
LVEQQVKEGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38473; Mature: 38342

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWPKGPILPQMDLLKLTNKHCTYPSSRQRAGSTGYWHFVCLKKCLGCPVIWLFDMKMQD
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEEECEECC
RDYDMRIVLAFMLISLIIVRLAHADELQVNEMDNHKLLDLVTATIQNNDVDEKEKNFVYK
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
SLNAIAKQYPAEVNYLLGQIFYFGIFENRNLEKAINYLTISSELNDTRAQYLLGTILAME
HHHHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
QGYVHYEQAIPLLEKAAADGIPDAMHNLYILYRKEKYPKDLAIEWLKKAANIKFEPAMFF
CCCEEHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH
LKREEYLAALESNDKEKLEEIAKYLISERFESLSGERYFLLAKIYNSSSPLSDDDLRLKY
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEE
LQLSADEGFDLAINILSNYNRLVEQQVKEGGN
EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AWPKGPILPQMDLLKLTNKHCTYPSSRQRAGSTGYWHFVCLKKCLGCPVIWLFDMKMQD
CCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEEECEECC
RDYDMRIVLAFMLISLIIVRLAHADELQVNEMDNHKLLDLVTATIQNNDVDEKEKNFVYK
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
SLNAIAKQYPAEVNYLLGQIFYFGIFENRNLEKAINYLTISSELNDTRAQYLLGTILAME
HHHHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
QGYVHYEQAIPLLEKAAADGIPDAMHNLYILYRKEKYPKDLAIEWLKKAANIKFEPAMFF
CCCEEHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH
LKREEYLAALESNDKEKLEEIAKYLISERFESLSGERYFLLAKIYNSSSPLSDDDLRLKY
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEE
LQLSADEGFDLAINILSNYNRLVEQQVKEGGN
EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA