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The map label for this gene is cirA [C]

Identifier: 119776028

GI number: 119776028

Start: 3440784

End: 3443387

Strand: Reverse

Name: cirA [C]

Synonym: Sama_2896

Alternate gene names: 119776028

Gene position: 3443387-3440784 (Counterclockwise)

Preceding gene: 119776030

Following gene: 119776027

Centisome position: 79.96

GC content: 53.42

Gene sequence:

>2604_bases
ATGGTTGCCGACAGGTCCCGAAGAGATAAAAAACATAATAAACAATTGAGAGCAAAGATGATGACCATACAAGACACTAA
AAAGTTTGGCTTGAGCTCATTGAGCTTGGCAGTCTCGCTGGCTTTGACAGGGGTTATGGGGGCAAGTGCAGCCTGGGCCG
AAGAGGCGCAGGAAGAAGCACAGGCGAGCGATAATATCGAGAAGATTGCCGTCGTGGGTTCTCGTGCTGCACCTCGCTCA
GTGGGTGAATCCCCAGTGCCGGTAGACATCATAGGAAATGAAGAGTTCACCAAGAATGGTACCACCGACATGAACGACCT
GCTTGGCAAGGTAGTTCCTTCTTATAACGTTAATGCCCAACCCATTTCAGATGCCGCAACTCTGGTGCGCCCCGCTAACA
TGCGCGGTCTGGCGCCTGACCATACATTGATTTTGTTAAACGGTAAGCGTCGTCATCGTGCTGCCGTTATTTCTTTCCTG
GGCGGTGGTGTGTCAAACGGTGCCCAGGGCCCAGACATTTCGGTGATCCCCGCTGTTGCACTCAAGCAGGTTGAAGTACT
GCGTGATGGCGCTGCGGCCCAGTACGGCTCTGATGCTATTGCCGGCGTGATTAACTTCCAGCTCAAAGACAATGCCGAAG
GTGGCACCATCGAAGCCCGTTACGGTGAGTTTTACGAAGGGGATGGTTCCAGCCCCATGATCGCGGCCAACGTGGGTATG
CCACTGACTGATAACGGTTTCTTTAACGTCAGCGCCGAATATAAAACCGCTGATGCCACCAGTCGCAGCGTGCAGCGTGA
TGATGCTGCCGACTTGATCGCCGCCGGTAACACTGCCGTGGCGAACCCCGCTCAGATTTGGGGTGCCCCTGAAACCAAAG
AAGACTTTAAGTTTTTCTTTAACGCCGGTCTGGATCTCAATGCCAATCAAACTGCTTACATGTTTGGTAACTGGGCCCGC
CGTGACGTAGAAGGTGGCTTTTACTTCCGTAACCCCAATAACCGCGGTGGCGTATACAGCGGTGATGATGGTGAGACGCT
GCTGGTGGGTGATCTGACCGGTGATATGTCCGGTAACTGCCCCGTTATCACCATCACCAACAACGTGCCTGATCCAGTGG
CACTGGCACAGGTGAAGAACGATCCAGATTGCTTTGTGTTCAATGAAATGTTCCCCGGTGGCTTTACGCCACGTTTTGGT
GGTGTCATTGAAGACACCTCCCTGAGCGCCGGTGTGAAAGGCACCACAGCAAGTAACCTGAACTACGATTTTGGTGTCAG
CTACGGTAAGAGTGACGCCGATTTCTACATCAAGAACACAGTCAACGCCTCTCTGGGCCCAGATTCGCCTACCGACTTCA
ATCCCGGTCGTTATGTGCAGATGGAGCGCGGTGCGTCTCTGGATTTCAGCTACTTTGAAGTGGATGAGTGGAGCTTCGCC
GCCGGTTTGGAATTCCGCCGTGAGACCTTTGAAATCTACAATGGCGACCCAGCCTCCTTTGAGCTTGGCCCACTGTACAC
CCAGGGTTTTGGTATCGGTTCCAACGGTTTCCCCGGCTTTAAACCCCAGGACTCTGGTTCATGGAGCCGCAATAACTACG
CCGCTTACTTCGATGCCGAGCACGATCTGACCGATAGCTGGTTGGTAACCGGTGCCCTGCGTTACGAGTACTATGATGAT
TTCGGTTCAACCACCAACTGGAAACTGAGCTCCATCTATAATGTGACCGACGACTTCTCGCTGCGTGCCGCGGCCAGCAC
CGGCTTCCGTGCTCCTACAGTGGGCCAGAGCAACGTGCGTAACGTAACAACGGCGTTCTCCGGTGGTCAGTTGGAAGATC
AGGCAACCCTGCCTCCTACCAACCCTATCTCCATCCAGAAAGGGGCGACACCGCTGGAGCCGGAAACTTCGGTTAACCTG
TCATTTGGTGCCGTGTTGACTGTGGGTGAGTTCTTCCTGACGGCGGATTACTTCCACATTACCCTGGAAGACCGTATCAC
CCAGAGTTCCAACCAGGAGCTGACCCAGGCGGATAAGGATGCGCTGATTGCTCAGGGTGTGCTGGATGCCAACAGCTACA
GTTCAGTGCTCTACTTCACAAATGACTTCGATACCACGACTCAGGGTGTCGATTTGGTTGCCAGTTACGCACCTGATTGG
CTGGATGGCGCCAACTTTGCGCTGGCCTATAACTGGACTGAAACCACCGTTGACAGATTCAATCCGGACAACATCAGCGA
AGCCCGCGTGAAGGTGCTTGAAGAAGCGCTCCCACACCACAAGGGTACCCTGACCTGGACCCAGGAGCTGGGTGCCAACC
TGCGCTCTATGGTTCGCATGAACTACTACGGTGAGTTCTATGAAGACCACCTGGATTCAGAAGGTGATTTGCCAATCTAC
AATGGCTCTACTGTGACCTTTGACGCTGAAGTAGGTTATGACTTCAACGACAACTGGAGCCTGGCAGTGGGTGCACAAAA
CCTGTTTGATACCTACCCAGATGACAACCCATGGGCCGGTATTGCGGGTGCGGCTTACCCTGTGACTTCACCCTATGGAT
TCAACGGCGGTTACTACTACGCACGTCTGAATTACAACTTCTGA

Upstream 100 bases:

>100_bases
ATGTTAACTTAATTGTTAGAAAATGTAATGGAATGTGATTCTAAAGTGTTATAGAAATGTCTGGGGGACAATTTTGCTGT
CCTTGGGAAGTGCCTTCGGG

Downstream 100 bases:

>100_bases
TAATCAGAAGGTGATAGAGGATGAAAAGGCTGCTTCGGCAGCCTTTTTTTATGGGAATCGGTTTATGTTGAGTGTGCTGC
CCTGAAATGCACACCCCGAA

Product: putative TonB-dependent outer membrane receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Ferric Enterobactin Receptor; NB Dependent Receptor Protein; Outer Membrane Receptor Protein; NB-Dependent Siderophore Receptor; Outer Membrane Protein; NB Dependent Receptor; NB-Dependent Receptor-Like Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor For Fe; Outer Membrane Siderophore Receptor; Outer Membrane Receptor Family Protein; Ferric Enterobactin Receptor Protein; Outer Membrane Cobalamin Receptor Protein; NB-Dependent Receptor Protein; Vitamin; Fe Transporter; Aminotransferase Class V Family; NB-Dependent Outer Membrane Siderophore Receptor; NB-Dependent Membrane Receptor Protein; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane nB-Dependent Receptor; NB-Dependent Sideophore Receptor; NB-Dependent Receptor Plug Domain Protein; Enterobactin Receptor; NB Dependent Ferric Enterobactin Receptor; Secreted nB-Dependent Receptor; Outer Membrane Receptor Proteins

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MVADRSRRDKKHNKQLRAKMMTIQDTKKFGLSSLSLAVSLALTGVMGASAAWAEEAQEEAQASDNIEKIAVVGSRAAPRS
VGESPVPVDIIGNEEFTKNGTTDMNDLLGKVVPSYNVNAQPISDAATLVRPANMRGLAPDHTLILLNGKRRHRAAVISFL
GGGVSNGAQGPDISVIPAVALKQVEVLRDGAAAQYGSDAIAGVINFQLKDNAEGGTIEARYGEFYEGDGSSPMIAANVGM
PLTDNGFFNVSAEYKTADATSRSVQRDDAADLIAAGNTAVANPAQIWGAPETKEDFKFFFNAGLDLNANQTAYMFGNWAR
RDVEGGFYFRNPNNRGGVYSGDDGETLLVGDLTGDMSGNCPVITITNNVPDPVALAQVKNDPDCFVFNEMFPGGFTPRFG
GVIEDTSLSAGVKGTTASNLNYDFGVSYGKSDADFYIKNTVNASLGPDSPTDFNPGRYVQMERGASLDFSYFEVDEWSFA
AGLEFRRETFEIYNGDPASFELGPLYTQGFGIGSNGFPGFKPQDSGSWSRNNYAAYFDAEHDLTDSWLVTGALRYEYYDD
FGSTTNWKLSSIYNVTDDFSLRAAASTGFRAPTVGQSNVRNVTTAFSGGQLEDQATLPPTNPISIQKGATPLEPETSVNL
SFGAVLTVGEFFLTADYFHITLEDRITQSSNQELTQADKDALIAQGVLDANSYSSVLYFTNDFDTTTQGVDLVASYAPDW
LDGANFALAYNWTETTVDRFNPDNISEARVKVLEEALPHHKGTLTWTQELGANLRSMVRMNYYGEFYEDHLDSEGDLPIY
NGSTVTFDAEVGYDFNDNWSLAVGAQNLFDTYPDDNPWAGIAGAAYPVTSPYGFNGGYYYARLNYNF

Sequences:

>Translated_867_residues
MVADRSRRDKKHNKQLRAKMMTIQDTKKFGLSSLSLAVSLALTGVMGASAAWAEEAQEEAQASDNIEKIAVVGSRAAPRS
VGESPVPVDIIGNEEFTKNGTTDMNDLLGKVVPSYNVNAQPISDAATLVRPANMRGLAPDHTLILLNGKRRHRAAVISFL
GGGVSNGAQGPDISVIPAVALKQVEVLRDGAAAQYGSDAIAGVINFQLKDNAEGGTIEARYGEFYEGDGSSPMIAANVGM
PLTDNGFFNVSAEYKTADATSRSVQRDDAADLIAAGNTAVANPAQIWGAPETKEDFKFFFNAGLDLNANQTAYMFGNWAR
RDVEGGFYFRNPNNRGGVYSGDDGETLLVGDLTGDMSGNCPVITITNNVPDPVALAQVKNDPDCFVFNEMFPGGFTPRFG
GVIEDTSLSAGVKGTTASNLNYDFGVSYGKSDADFYIKNTVNASLGPDSPTDFNPGRYVQMERGASLDFSYFEVDEWSFA
AGLEFRRETFEIYNGDPASFELGPLYTQGFGIGSNGFPGFKPQDSGSWSRNNYAAYFDAEHDLTDSWLVTGALRYEYYDD
FGSTTNWKLSSIYNVTDDFSLRAAASTGFRAPTVGQSNVRNVTTAFSGGQLEDQATLPPTNPISIQKGATPLEPETSVNL
SFGAVLTVGEFFLTADYFHITLEDRITQSSNQELTQADKDALIAQGVLDANSYSSVLYFTNDFDTTTQGVDLVASYAPDW
LDGANFALAYNWTETTVDRFNPDNISEARVKVLEEALPHHKGTLTWTQELGANLRSMVRMNYYGEFYEDHLDSEGDLPIY
NGSTVTFDAEVGYDFNDNWSLAVGAQNLFDTYPDDNPWAGIAGAAYPVTSPYGFNGGYYYARLNYNF
>Mature_867_residues
MVADRSRRDKKHNKQLRAKMMTIQDTKKFGLSSLSLAVSLALTGVMGASAAWAEEAQEEAQASDNIEKIAVVGSRAAPRS
VGESPVPVDIIGNEEFTKNGTTDMNDLLGKVVPSYNVNAQPISDAATLVRPANMRGLAPDHTLILLNGKRRHRAAVISFL
GGGVSNGAQGPDISVIPAVALKQVEVLRDGAAAQYGSDAIAGVINFQLKDNAEGGTIEARYGEFYEGDGSSPMIAANVGM
PLTDNGFFNVSAEYKTADATSRSVQRDDAADLIAAGNTAVANPAQIWGAPETKEDFKFFFNAGLDLNANQTAYMFGNWAR
RDVEGGFYFRNPNNRGGVYSGDDGETLLVGDLTGDMSGNCPVITITNNVPDPVALAQVKNDPDCFVFNEMFPGGFTPRFG
GVIEDTSLSAGVKGTTASNLNYDFGVSYGKSDADFYIKNTVNASLGPDSPTDFNPGRYVQMERGASLDFSYFEVDEWSFA
AGLEFRRETFEIYNGDPASFELGPLYTQGFGIGSNGFPGFKPQDSGSWSRNNYAAYFDAEHDLTDSWLVTGALRYEYYDD
FGSTTNWKLSSIYNVTDDFSLRAAASTGFRAPTVGQSNVRNVTTAFSGGQLEDQATLPPTNPISIQKGATPLEPETSVNL
SFGAVLTVGEFFLTADYFHITLEDRITQSSNQELTQADKDALIAQGVLDANSYSSVLYFTNDFDTTTQGVDLVASYAPDW
LDGANFALAYNWTETTVDRFNPDNISEARVKVLEEALPHHKGTLTWTQELGANLRSMVRMNYYGEFYEDHLDSEGDLPIY
NGSTVTFDAEVGYDFNDNWSLAVGAQNLFDTYPDDNPWAGIAGAAYPVTSPYGFNGGYYYARLNYNF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94017; Mature: 94017

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVADRSRRDKKHNKQLRAKMMTIQDTKKFGLSSLSLAVSLALTGVMGASAAWAEEAQEEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QASDNIEKIAVVGSRAAPRSVGESPVPVDIIGNEEFTKNGTTDMNDLLGKVVPSYNVNAQ
HHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PISDAATLVRPANMRGLAPDHTLILLNGKRRHRAAVISFLGGGVSNGAQGPDISVIPAVA
CCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHH
LKQVEVLRDGAAAQYGSDAIAGVINFQLKDNAEGGTIEARYGEFYEGDGSSPMIAANVGM
HHHHHHHHCCCCHHCCCCCEEEEEEEEEECCCCCCEEEECCCCEECCCCCCCEEEEECCC
PLTDNGFFNVSAEYKTADATSRSVQRDDAADLIAAGNTAVANPAQIWGAPETKEDFKFFF
CCCCCCCEEEEECCEECCCCHHHHCCCCCHHEEECCCCCCCCHHHHCCCCCCHHHHHHEE
NAGLDLNANQTAYMFGNWARRDVEGGFYFRNPNNRGGVYSGDDGETLLVGDLTGDMSGNC
ECCCCCCCCCEEEEECCCHHCCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
PVITITNNVPDPVALAQVKNDPDCFVFNEMFPGGFTPRFGGVIEDTSLSAGVKGTTASNL
CEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
NYDFGVSYGKSDADFYIKNTVNASLGPDSPTDFNPGRYVQMERGASLDFSYFEVDEWSFA
CEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE
AGLEFRRETFEIYNGDPASFELGPLYTQGFGIGSNGFPGFKPQDSGSWSRNNYAAYFDAE
CCCHHCCCEEEEECCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
HDLTDSWLVTGALRYEYYDDFGSTTNWKLSSIYNVTDDFSLRAAASTGFRAPTVGQSNVR
CCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
NVTTAFSGGQLEDQATLPPTNPISIQKGATPLEPETSVNLSFGAVLTVGEFFLTADYFHI
EEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCHHHHHHHHEEEEEEEEE
TLEDRITQSSNQELTQADKDALIAQGVLDANSYSSVLYFTNDFDTTTQGVDLVASYAPDW
EEHHHHCCCCCCHHHHHHHHHHHHHCEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCCC
LDGANFALAYNWTETTVDRFNPDNISEARVKVLEEALPHHKGTLTWTQELGANLRSMVRM
CCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHCHHHHHHHHH
NYYGEFYEDHLDSEGDLPIYNGSTVTFDAEVGYDFNDNWSLAVGAQNLFDTYPDDNPWAG
HHCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCCCCEEEEECCHHHHHCCCCCCCCCC
IAGAAYPVTSPYGFNGGYYYARLNYNF
CCCCCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MVADRSRRDKKHNKQLRAKMMTIQDTKKFGLSSLSLAVSLALTGVMGASAAWAEEAQEEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QASDNIEKIAVVGSRAAPRSVGESPVPVDIIGNEEFTKNGTTDMNDLLGKVVPSYNVNAQ
HHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PISDAATLVRPANMRGLAPDHTLILLNGKRRHRAAVISFLGGGVSNGAQGPDISVIPAVA
CCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHH
LKQVEVLRDGAAAQYGSDAIAGVINFQLKDNAEGGTIEARYGEFYEGDGSSPMIAANVGM
HHHHHHHHCCCCHHCCCCCEEEEEEEEEECCCCCCEEEECCCCEECCCCCCCEEEEECCC
PLTDNGFFNVSAEYKTADATSRSVQRDDAADLIAAGNTAVANPAQIWGAPETKEDFKFFF
CCCCCCCEEEEECCEECCCCHHHHCCCCCHHEEECCCCCCCCHHHHCCCCCCHHHHHHEE
NAGLDLNANQTAYMFGNWARRDVEGGFYFRNPNNRGGVYSGDDGETLLVGDLTGDMSGNC
ECCCCCCCCCEEEEECCCHHCCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
PVITITNNVPDPVALAQVKNDPDCFVFNEMFPGGFTPRFGGVIEDTSLSAGVKGTTASNL
CEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
NYDFGVSYGKSDADFYIKNTVNASLGPDSPTDFNPGRYVQMERGASLDFSYFEVDEWSFA
CEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE
AGLEFRRETFEIYNGDPASFELGPLYTQGFGIGSNGFPGFKPQDSGSWSRNNYAAYFDAE
CCCHHCCCEEEEECCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
HDLTDSWLVTGALRYEYYDDFGSTTNWKLSSIYNVTDDFSLRAAASTGFRAPTVGQSNVR
CCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
NVTTAFSGGQLEDQATLPPTNPISIQKGATPLEPETSVNLSFGAVLTVGEFFLTADYFHI
EEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCHHHHHHHHEEEEEEEEE
TLEDRITQSSNQELTQADKDALIAQGVLDANSYSSVLYFTNDFDTTTQGVDLVASYAPDW
EEHHHHCCCCCCHHHHHHHHHHHHHCEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCCC
LDGANFALAYNWTETTVDRFNPDNISEARVKVLEEALPHHKGTLTWTQELGANLRSMVRM
CCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHCHHHHHHHHH
NYYGEFYEDHLDSEGDLPIYNGSTVTFDAEVGYDFNDNWSLAVGAQNLFDTYPDDNPWAG
HHCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCCCCEEEEECCHHHHHCCCCCCCCCC
IAGAAYPVTSPYGFNGGYYYARLNYNF
CCCCCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA