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The map label for this gene is yrpB [H]

Identifier: 119775866

GI number: 119775866

Start: 3267020

End: 3268066

Strand: Reverse

Name: yrpB [H]

Synonym: Sama_2734

Alternate gene names: 119775866

Gene position: 3268066-3267020 (Counterclockwise)

Preceding gene: 119775867

Following gene: 119775865

Centisome position: 75.89

GC content: 58.36

Gene sequence:

>1047_bases
ATGAGCAGACTATTACAGGGGTTTCTCGGCACCGAGTTACCTATCATTCAGGCCCCCATGGCCGGGGTGCAGGACAGTGA
ACTCACCATTGCGGTATGCAGCGCCGGAGGTTTGGGGTCCTTGCCCTGCGGCATGTTGAGCAATGAAGTGCTGGAGGCTG
AAGTGCGCCGGATTCAGGCGGCAACCACGGCTCCTTTTAATCTCAACTTTTTTTGTCATCGGGTGAGTGATTACCCGGAC
CCAATCCGTCGCCGCTGGCAGTCTTTGCTGGCACCTTACTTTGACGAGCTGGGCGTTACCGCGTCTTCGGGGCCAGCCAG
GGCAAGTCGCCAGCCTTTCAGTCATGATGTCGCCGATGTGATAGAAACGGCGAGACCGGCCTTTGTCAGCTTTCATTTTG
GGCTTCCGGACAAGGCCTTATTGCAGCGGGTAAAAAGTTGGGGCACCAGGGTACTGTCGTCGGCAACGACCCTTGATGAG
GCACTGTGGCTGGAGGCCAATGGCGCCGACGGCATCATACTGCAGGGGCTTGAGGCCGGTGGTCACAGAGGCATGTTTTT
GTCGATGGATTTGGCTACCCAGCAGCCGCTTCATGGGTTGCTGGCACTGGCAAAGGATAAACTGACGCTGCCCGTGATTG
CCGCAGGTGGTCTTGGCTCTGCTACCGACATCAATGGTGCGCTCAAGGCCGGTGCCGATGCGGTGCAGATTGGTACTGCA
TACCTGCTGTGCAGTGAAGCCAAAACCTCAGCTATCCATCGCCGCGCCATCGGTGAGCAACCGCTGCAAACTCAAATCAC
CACGCTTTTCTCCGGCAAGCCGGCCCGGGGCATAGTCAATCGCGCCATGGCAGAGCTTGGTGCCATGCATGAGGCCGTGC
CGCCATTTCCCTTTGCCTCCATCGATATGGGGCTGCTGCGACAGGCAGCGGAGCAGCTGGGTAAGGGAGATTTCTCCCCT
CTGTGGTGTGGGCAAAATACCTCAGGCTGTCGTGCTATCCCGGCTGCGGAAATGACCCGTCGTCTTGCGGCAGGGGTGAT
GTTCTGA

Upstream 100 bases:

>100_bases
CGCATTGATGACACAGTACTTTGCCGGATGTAAATCGGGCTGTATACACTGAGCCCCGAGTCATCGCCGGGTTCGCAGCG
AGTAACCACAGGGAGTGGAA

Downstream 100 bases:

>100_bases
GTTTGGGGACGCTGAGAGTGAATGCATGGGAGAAGGAGTGCAGATGTATATAGGTGAGGCGGCCAGGGTTACAGGACTTA
CCATCAAAGCCATCCGCTTT

Product: putative oxidoreductase protein

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSRLLQGFLGTELPIIQAPMAGVQDSELTIAVCSAGGLGSLPCGMLSNEVLEAEVRRIQAATTAPFNLNFFCHRVSDYPD
PIRRRWQSLLAPYFDELGVTASSGPARASRQPFSHDVADVIETARPAFVSFHFGLPDKALLQRVKSWGTRVLSSATTLDE
ALWLEANGADGIILQGLEAGGHRGMFLSMDLATQQPLHGLLALAKDKLTLPVIAAGGLGSATDINGALKAGADAVQIGTA
YLLCSEAKTSAIHRRAIGEQPLQTQITTLFSGKPARGIVNRAMAELGAMHEAVPPFPFASIDMGLLRQAAEQLGKGDFSP
LWCGQNTSGCRAIPAAEMTRRLAAGVMF

Sequences:

>Translated_348_residues
MSRLLQGFLGTELPIIQAPMAGVQDSELTIAVCSAGGLGSLPCGMLSNEVLEAEVRRIQAATTAPFNLNFFCHRVSDYPD
PIRRRWQSLLAPYFDELGVTASSGPARASRQPFSHDVADVIETARPAFVSFHFGLPDKALLQRVKSWGTRVLSSATTLDE
ALWLEANGADGIILQGLEAGGHRGMFLSMDLATQQPLHGLLALAKDKLTLPVIAAGGLGSATDINGALKAGADAVQIGTA
YLLCSEAKTSAIHRRAIGEQPLQTQITTLFSGKPARGIVNRAMAELGAMHEAVPPFPFASIDMGLLRQAAEQLGKGDFSP
LWCGQNTSGCRAIPAAEMTRRLAAGVMF
>Mature_347_residues
SRLLQGFLGTELPIIQAPMAGVQDSELTIAVCSAGGLGSLPCGMLSNEVLEAEVRRIQAATTAPFNLNFFCHRVSDYPDP
IRRRWQSLLAPYFDELGVTASSGPARASRQPFSHDVADVIETARPAFVSFHFGLPDKALLQRVKSWGTRVLSSATTLDEA
LWLEANGADGIILQGLEAGGHRGMFLSMDLATQQPLHGLLALAKDKLTLPVIAAGGLGSATDINGALKAGADAVQIGTAY
LLCSEAKTSAIHRRAIGEQPLQTQITTLFSGKPARGIVNRAMAELGAMHEAVPPFPFASIDMGLLRQAAEQLGKGDFSPL
WCGQNTSGCRAIPAAEMTRRLAAGVMF

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=353, Percent_Identity=32.8611898016997, Blast_Score=153, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 36906; Mature: 36775

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLQGFLGTELPIIQAPMAGVQDSELTIAVCSAGGLGSLPCGMLSNEVLEAEVRRIQA
CHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
ATTAPFNLNFFCHRVSDYPDPIRRRWQSLLAPYFDELGVTASSGPARASRQPFSHDVADV
HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
IETARPAFVSFHFGLPDKALLQRVKSWGTRVLSSATTLDEALWLEANGADGIILQGLEAG
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCC
GHRGMFLSMDLATQQPLHGLLALAKDKLTLPVIAAGGLGSATDINGALKAGADAVQIGTA
CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHH
YLLCSEAKTSAIHRRAIGEQPLQTQITTLFSGKPARGIVNRAMAELGAMHEAVPPFPFAS
EEEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
IDMGLLRQAAEQLGKGDFSPLWCGQNTSGCRAIPAAEMTRRLAAGVMF
CCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRLLQGFLGTELPIIQAPMAGVQDSELTIAVCSAGGLGSLPCGMLSNEVLEAEVRRIQA
HHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
ATTAPFNLNFFCHRVSDYPDPIRRRWQSLLAPYFDELGVTASSGPARASRQPFSHDVADV
HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
IETARPAFVSFHFGLPDKALLQRVKSWGTRVLSSATTLDEALWLEANGADGIILQGLEAG
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCC
GHRGMFLSMDLATQQPLHGLLALAKDKLTLPVIAAGGLGSATDINGALKAGADAVQIGTA
CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHH
YLLCSEAKTSAIHRRAIGEQPLQTQITTLFSGKPARGIVNRAMAELGAMHEAVPPFPFAS
EEEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
IDMGLLRQAAEQLGKGDFSPLWCGQNTSGCRAIPAAEMTRRLAAGVMF
CCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]