The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774655

Identifier: 119774655

GI number: 119774655

Start: 1847479

End: 1847970

Strand: Direct

Name: 119774655

Synonym: Sama_1518

Alternate gene names: NA

Gene position: 1847479-1847970 (Clockwise)

Preceding gene: 119774654

Following gene: 119774656

Centisome position: 42.9

GC content: 53.46

Gene sequence:

>492_bases
GTGGAGCACACTTTGCTCAAGTTTGAACACATCCGCTGGGTCGATGACAAGGGCCATATCAAACCGCCGCTGGGGCTCTA
TCTGCTGCTGACCTTTCTTGCCCGGGGCTGGGTGGTATTTGTGGCCTCACTGACCCAATTCAGCGACAGAGCTGGCTTGG
TTCGGCTGTTTTATCCCCACAAGGAAAGCTTTTTACTGGCGCTTGCCACCGGATTTGGGGCTTTGCTGTGTTATGGGCTG
ATTATTCTTGAGCGTAAGGCGCGGCCGGATTGGGCGATGAGCCTGTTCAGCCATTTGAAATGGCTGCTGTGGCCCTTGTT
GGCGCTGGATGCCGCGATGCTGATAGTGCGTTTGCTCTCCAGTGGCTTTTTGTTTTCATGGACGGCGGCCGCGGATGCGG
TGCTGATTTTCTGGTTTGCCATATATCTTCTCAAATCCAGCCATTTACGGCTTTACCTCGCTGACTGGAAGCGTCCTGTC
ATTCATCAATAA

Upstream 100 bases:

>100_bases
GACGCAATAGATGCGATAAAGGCCCGCCGATGCGGGCCTTTATGGTTCTCGGGCCTTGAATCCCGGGCATCTAGCCCCCA
AGTCAGGGGAAAGACATGAC

Downstream 100 bases:

>100_bases
GTGGCGCAGCGCCTGCGCAAACGCTTATTGAGTTCGCCGCAGTTATGGCAAGAGCGATAGGTGTATTCCGGTTTGGGACT
CTGCCTCAGTTCAGGGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MEHTLLKFEHIRWVDDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPHKESFLLALATGFGALLCYGL
IILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRLLSSGFLFSWTAAADAVLIFWFAIYLLKSSHLRLYLADWKRPV
IHQ

Sequences:

>Translated_163_residues
MEHTLLKFEHIRWVDDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPHKESFLLALATGFGALLCYGL
IILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRLLSSGFLFSWTAAADAVLIFWFAIYLLKSSHLRLYLADWKRPV
IHQ
>Mature_163_residues
MEHTLLKFEHIRWVDDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPHKESFLLALATGFGALLCYGL
IILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRLLSSGFLFSWTAAADAVLIFWFAIYLLKSSHLRLYLADWKRPV
IHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18839; Mature: 18839

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTLLKFEHIRWVDDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPH
CCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
KESFLLALATGFGALLCYGLIILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRLLS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFLFSWTAAADAVLIFWFAIYLLKSSHLRLYLADWKRPVIHQ
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MEHTLLKFEHIRWVDDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPH
CCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
KESFLLALATGFGALLCYGLIILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRLLS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFLFSWTAAADAVLIFWFAIYLLKSSHLRLYLADWKRPVIHQ
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA