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The map label for this gene is 119774654

Identifier: 119774654

GI number: 119774654

Start: 1846415

End: 1847356

Strand: Direct

Name: 119774654

Synonym: Sama_1517

Alternate gene names: NA

Gene position: 1846415-1847356 (Clockwise)

Preceding gene: 119774653

Following gene: 119774655

Centisome position: 42.88

GC content: 54.14

Gene sequence:

>942_bases
ATGTACCCACCCAAGTCCCTTATCACCGTCAGTTTGCTGCTGGCACTCATCAGTGCGGTTTCCCACGCCAAGGGTCGCCC
CGGTACCAACCCCACCGAGCCTGCCGATCCCGATGTGGTATTGCCTATCCGTGTGGATTGCAGCGCCACTATCAATTTGT
GGGCGCAGGACATGACAGACCCGCAAATTGCCGATACCTGTGCGCAGCTCTCAAGCCAGGAAAGTGATTTTCACCAAAGA
ATGCAAACCTTTGGTGAGCCTGTGGCAAACGACTACAACGACAGCCTGCGGGTGGTGGTGTTTGATGATTACTCCCAATA
TGACAAATACGGCTATGAGCTTTTCAATATCAGCACCAACAACGGCGGCATTTACATTGAAGGCAATCCGGCGGATGTAA
ACAACCAGGCGAGTTTCTACGCCCACGAAGCCGACTGGCTACTTCCCGAGTTTGAAATTTGGAATCTGCGCCACGAGTAT
ATCCATTACCTGGAAGGGCGCTTTGTCAGCTATGGCGGCTTTAATTTCTACCCGAGTAAGATGGTGTGGTGGGCTGAGGG
CCTTGCGGAGTACCTTTCCCTTGGCAGCGACAATGCCACAGCGGTGAATCTGGCACTTAACACCCGCGCCAATCGTCGCC
CGACCCTGGCGGCAATTTTTTCAACCAGTTACCGGGATGGCACCGACAGGGTTTACCGCTGGAGTTATCTGGCAATTCGC
TTCCTGTTTGAGCGCCACGAAGCCGAAGTGCTGGCCATGACTGAGCATCTGAAACATAACCAGTTTGCCAGCTATGAAGC
GGCGCTTGGCCAGTTTGCGACAAACTATCAGGCCGAGTTTGCCGAGTGGATGAATGGCCTGGCGCCGCAAAAGGCAAAGG
CGCAGGACAGTAAGCGTGAACAGATGCTGCTGCGTCATGCTGAGCACAAAGGGCGCCAGTAA

Upstream 100 bases:

>100_bases
AAAAAACGTCAACTTCAGGTTGGCGTTTTTTTGTTGCTCGCACTCGTGAAATAAAATATACAATATCCAGTAACACAAAT
ATAACAACTGGAGAAAACAC

Downstream 100 bases:

>100_bases
TAGTCCCAAAGCCAGACAAGTTGACGCAATAGATGCGATAAAGGCCCGCCGATGCGGGCCTTTATGGTTCTCGGGCCTTG
AATCCCGGGCATCTAGCCCC

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MYPPKSLITVSLLLALISAVSHAKGRPGTNPTEPADPDVVLPIRVDCSATINLWAQDMTDPQIADTCAQLSSQESDFHQR
MQTFGEPVANDYNDSLRVVVFDDYSQYDKYGYELFNISTNNGGIYIEGNPADVNNQASFYAHEADWLLPEFEIWNLRHEY
IHYLEGRFVSYGGFNFYPSKMVWWAEGLAEYLSLGSDNATAVNLALNTRANRRPTLAAIFSTSYRDGTDRVYRWSYLAIR
FLFERHEAEVLAMTEHLKHNQFASYEAALGQFATNYQAEFAEWMNGLAPQKAKAQDSKREQMLLRHAEHKGRQ

Sequences:

>Translated_313_residues
MYPPKSLITVSLLLALISAVSHAKGRPGTNPTEPADPDVVLPIRVDCSATINLWAQDMTDPQIADTCAQLSSQESDFHQR
MQTFGEPVANDYNDSLRVVVFDDYSQYDKYGYELFNISTNNGGIYIEGNPADVNNQASFYAHEADWLLPEFEIWNLRHEY
IHYLEGRFVSYGGFNFYPSKMVWWAEGLAEYLSLGSDNATAVNLALNTRANRRPTLAAIFSTSYRDGTDRVYRWSYLAIR
FLFERHEAEVLAMTEHLKHNQFASYEAALGQFATNYQAEFAEWMNGLAPQKAKAQDSKREQMLLRHAEHKGRQ
>Mature_313_residues
MYPPKSLITVSLLLALISAVSHAKGRPGTNPTEPADPDVVLPIRVDCSATINLWAQDMTDPQIADTCAQLSSQESDFHQR
MQTFGEPVANDYNDSLRVVVFDDYSQYDKYGYELFNISTNNGGIYIEGNPADVNNQASFYAHEADWLLPEFEIWNLRHEY
IHYLEGRFVSYGGFNFYPSKMVWWAEGLAEYLSLGSDNATAVNLALNTRANRRPTLAAIFSTSYRDGTDRVYRWSYLAIR
FLFERHEAEVLAMTEHLKHNQFASYEAALGQFATNYQAEFAEWMNGLAPQKAKAQDSKREQMLLRHAEHKGRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PKD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013510
- InterPro:   IPR002169
- InterPro:   IPR013661
- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD [H]

EC number: =3.4.24.3 [H]

Molecular weight: Translated: 35692; Mature: 35692

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPPKSLITVSLLLALISAVSHAKGRPGTNPTEPADPDVVLPIRVDCSATINLWAQDMTD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCC
PQIADTCAQLSSQESDFHQRMQTFGEPVANDYNDSLRVVVFDDYSQYDKYGYELFNISTN
HHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCHHHHCCCEEEEEEEEC
NGGIYIEGNPADVNNQASFYAHEADWLLPEFEIWNLRHEYIHYLEGRFVSYGGFNFYPSK
CCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCH
MVWWAEGLAEYLSLGSDNATAVNLALNTRANRRPTLAAIFSTSYRDGTDRVYRWSYLAIR
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
FLFERHEAEVLAMTEHLKHNQFASYEAALGQFATNYQAEFAEWMNGLAPQKAKAQDSKRE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QMLLRHAEHKGRQ
HHHHHHHHHCCCC
>Mature Secondary Structure
MYPPKSLITVSLLLALISAVSHAKGRPGTNPTEPADPDVVLPIRVDCSATINLWAQDMTD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCC
PQIADTCAQLSSQESDFHQRMQTFGEPVANDYNDSLRVVVFDDYSQYDKYGYELFNISTN
HHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCHHHHCCCEEEEEEEEC
NGGIYIEGNPADVNNQASFYAHEADWLLPEFEIWNLRHEYIHYLEGRFVSYGGFNFYPSK
CCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCH
MVWWAEGLAEYLSLGSDNATAVNLALNTRANRRPTLAAIFSTSYRDGTDRVYRWSYLAIR
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
FLFERHEAEVLAMTEHLKHNQFASYEAALGQFATNYQAEFAEWMNGLAPQKAKAQDSKRE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QMLLRHAEHKGRQ
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1311172 [H]