The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774611

Identifier: 119774611

GI number: 119774611

Start: 1783169

End: 1784260

Strand: Direct

Name: 119774611

Synonym: Sama_1474

Alternate gene names: NA

Gene position: 1783169-1784260 (Clockwise)

Preceding gene: 119774609

Following gene: 119774612

Centisome position: 41.41

GC content: 56.87

Gene sequence:

>1092_bases
ATGCAGGGAAACGCAGCGCCACCCGATAAACCCACTGGTGTGGAGTCCAAACTTTTTCCGGCGTCTCCCTCTGTTCGTGC
CCAGTTGGCACAGTGGCTCGATGACGGATATTTGCGCAAGGGAGCCCTGTCGCAATTGCCCCCGCTGGTGGAAGCCTGTG
AGTCCCGGGCTCCACAAAACTGGTTAACGCCGCTTTACACCATGATGCTGTACCTGGGCGCCTTGTTGCTGGGGGCCGGG
ATCATTTTCTTTTTTGCCTACAACTGGGCGAATCTGCACCACTTTGCCAAATTTGTCCTGGTGGAAACGGCCATCGCATT
TACTGTGTGCGGGCTGTATCCGGTGAGTCGGTTAGCGCCGGGAAGACAGGTGTTTCACTGGCTTACGGGGGCCCTGTTAC
TGCTGCTGGACCTGTTGGTGGGCGCCCTGTTGGCGCTGGTGGGGCAGGTGTATCAAACCGGCGCCGATCCCTGGCAGCTC
TTTGCCATTTGGGCTGCCTTTACCTTGTTGCCCGCACTGGTATATCGCAGCGATTTGCTCTGGAGCGCCTTTTGGGCCCA
GAGCAATCTGGCGCTGTGGCTTCATTTTGCCCATCTTGGTGCCATCTTGGGCATTGTGGTTGATGTCGGTTGGGCGATGC
TCATTATTGCTGTCTGTAACCTGGGCCTGCACTGGCTACTTGAAGTCGGACAAAGACGCAAGTTGCCCGTTTTTGCCCAT
ACGTTCACCAATACGCTTGCCCTTACGGCGGGGGTGACCGGCCTTGCCTGGTACGGCGCTTATCACATCCTGGATACCCG
CCTTGGCTGGCAACATGGTGCGCTCTTGGTGGCACTGCTGGCGCTGGTGCCGCTGATTTATCTTGTTTACCGCAGATGGT
GCCTGAGGATTACGGCGCTTGGCATATGGGGATTTGTCGTTATCGCCGAGTCGAGCATCTTGCTTGCGCGGGTTCTGTTT
GAGGGCAGCGAGCCGGTGGGGAGTTTCTTGCTGGTGGGCTGCTATGTGATTGGCTGTAGCAGCGGCCTTGCGATTTATCT
CAAGGGTCTTCTTCGGGAGGAAAAGATGCAGGAGATGCAACATGGTGGATAA

Upstream 100 bases:

>100_bases
TAAAGTTCATTGAGGCATGTCCCTCTAACCGTCCTATTGCAGGCACGCATGAGTAGCAGGCGGGGATGAGCCTGCTGACG
AAAAGTAATCAGGAGCAAGT

Downstream 100 bases:

>100_bases
ATCGCAGCTATGGCAGGGGCTTGTGGAAAAAGGCCTGACAACCAGGGATACCTTGCCAGAGAATCATCACGGACCTCTGT
GGTTAACCCTGCTGACAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MQGNAAPPDKPTGVESKLFPASPSVRAQLAQWLDDGYLRKGALSQLPPLVEACESRAPQNWLTPLYTMMLYLGALLLGAG
IIFFFAYNWANLHHFAKFVLVETAIAFTVCGLYPVSRLAPGRQVFHWLTGALLLLLDLLVGALLALVGQVYQTGADPWQL
FAIWAAFTLLPALVYRSDLLWSAFWAQSNLALWLHFAHLGAILGIVVDVGWAMLIIAVCNLGLHWLLEVGQRRKLPVFAH
TFTNTLALTAGVTGLAWYGAYHILDTRLGWQHGALLVALLALVPLIYLVYRRWCLRITALGIWGFVVIAESSILLARVLF
EGSEPVGSFLLVGCYVIGCSSGLAIYLKGLLREEKMQEMQHGG

Sequences:

>Translated_363_residues
MQGNAAPPDKPTGVESKLFPASPSVRAQLAQWLDDGYLRKGALSQLPPLVEACESRAPQNWLTPLYTMMLYLGALLLGAG
IIFFFAYNWANLHHFAKFVLVETAIAFTVCGLYPVSRLAPGRQVFHWLTGALLLLLDLLVGALLALVGQVYQTGADPWQL
FAIWAAFTLLPALVYRSDLLWSAFWAQSNLALWLHFAHLGAILGIVVDVGWAMLIIAVCNLGLHWLLEVGQRRKLPVFAH
TFTNTLALTAGVTGLAWYGAYHILDTRLGWQHGALLVALLALVPLIYLVYRRWCLRITALGIWGFVVIAESSILLARVLF
EGSEPVGSFLLVGCYVIGCSSGLAIYLKGLLREEKMQEMQHGG
>Mature_363_residues
MQGNAAPPDKPTGVESKLFPASPSVRAQLAQWLDDGYLRKGALSQLPPLVEACESRAPQNWLTPLYTMMLYLGALLLGAG
IIFFFAYNWANLHHFAKFVLVETAIAFTVCGLYPVSRLAPGRQVFHWLTGALLLLLDLLVGALLALVGQVYQTGADPWQL
FAIWAAFTLLPALVYRSDLLWSAFWAQSNLALWLHFAHLGAILGIVVDVGWAMLIIAVCNLGLHWLLEVGQRRKLPVFAH
TFTNTLALTAGVTGLAWYGAYHILDTRLGWQHGALLVALLALVPLIYLVYRRWCLRITALGIWGFVVIAESSILLARVLF
EGSEPVGSFLLVGCYVIGCSSGLAIYLKGLLREEKMQEMQHGG

Specific function: Unknown

COG id: COG4984

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39940; Mature: 39940

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNAAPPDKPTGVESKLFPASPSVRAQLAQWLDDGYLRKGALSQLPPLVEACESRAPQN
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCH
WLTPLYTMMLYLGALLLGAGIIFFFAYNWANLHHFAKFVLVETAIAFTVCGLYPVSRLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRQVFHWLTGALLLLLDLLVGALLALVGQVYQTGADPWQLFAIWAAFTLLPALVYRSDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WSAFWAQSNLALWLHFAHLGAILGIVVDVGWAMLIIAVCNLGLHWLLEVGQRRKLPVFAH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
TFTNTLALTAGVTGLAWYGAYHILDTRLGWQHGALLVALLALVPLIYLVYRRWCLRITAL
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWGFVVIAESSILLARVLFEGSEPVGSFLLVGCYVIGCSSGLAIYLKGLLREEKMQEMQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HGG
CCC
>Mature Secondary Structure
MQGNAAPPDKPTGVESKLFPASPSVRAQLAQWLDDGYLRKGALSQLPPLVEACESRAPQN
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCH
WLTPLYTMMLYLGALLLGAGIIFFFAYNWANLHHFAKFVLVETAIAFTVCGLYPVSRLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRQVFHWLTGALLLLLDLLVGALLALVGQVYQTGADPWQLFAIWAAFTLLPALVYRSDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WSAFWAQSNLALWLHFAHLGAILGIVVDVGWAMLIIAVCNLGLHWLLEVGQRRKLPVFAH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
TFTNTLALTAGVTGLAWYGAYHILDTRLGWQHGALLVALLALVPLIYLVYRRWCLRITAL
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWGFVVIAESSILLARVLFEGSEPVGSFLLVGCYVIGCSSGLAIYLKGLLREEKMQEMQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA