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The map label for this gene is 119774608

Identifier: 119774608

GI number: 119774608

Start: 1779741

End: 1780943

Strand: Direct

Name: 119774608

Synonym: Sama_1471

Alternate gene names: NA

Gene position: 1779741-1780943 (Clockwise)

Preceding gene: 119774607

Following gene: 119774609

Centisome position: 41.33

GC content: 56.28

Gene sequence:

>1203_bases
ATGAAACGGCTAATGTTATTGCCTCTGCTGCCATTGGCGCTTTTGGCGGGCTGTCAGGAATCCACGGAAACCGCAGTTCT
CACCATGAAAGTCAGCCGCAGCGACTTCAAGGTGGAAATACCGGCCCGTGGCGAGCTTGAAGCCAAAAGTGCCACACCCG
TGTCGGTACCCGGTGGGCTTCGTGGTCCCCAATCCCTTGCCTGGGTTCTGGACAATTTTTCTGAGGTGAAGGCCGGGGAT
GTGGTTGCCAGACTCGATGGCCGCCGCGAGACCCTGGAGCTTGAGCTTGAAAAATACGATTTCGACAAGCTGGCGCTCGA
TGGCGACATTCAGGTCGAAAAGAATCTCACCACGGCTCAGGAGCTGGTGATAGGTCGGGACGTGACCGAGGAGGAACTCA
GCCTGTCGGAACGCTTTTTCACCGATGATGAGCGGGTGTACACCAAAATCGACATCATTGATCAGATGCGTAACAAGGAT
TATCTGCAGGCGCGTTTGGGGTATTTCGATTGGGGCAAGGGGAGCCATGATGCCCAGGCAACCGCAGAGCTTGACCTTAT
CCGATTGAAACAAAAAGGGATACAGGCAAAAATTGCCACCTACCAAAACAACCTGTCCCAGATGGAAATCACGGCGCCCC
ACGATGGCCTGTTTGTTATGCAGCCCGGTTGGAGCGGCGCCTTGCCCATGGCCGGTGACATGGTGTGGTCGGGGATACCG
CTTGGCACCTTACCGGATACCTCTGTGATGCAGGCAAAACTCTGGGTGCTTGAGTCAGAGGCGGTGGGACTGGCGGTAGA
CAAGCCCGTGGTACTGACTCTGGATGCGTACCCGGATAGACCCTTTACCGGCAAGGTGACCCAGGTGGATGCCCTCGCCA
AGCCAAAAGACAGGGACAGCCCGGTTAACTATTTTGAGTTCACTGTGGCGCTGGATAACACCGACACCCAAATCATGTTA
CCCGGTCGCCAGGTGCAGGCAAGGGTGTCGGCCCTGAGTGAAGACCAGGTACTGGCCGTGCCCAATCAGGCCATCTTTCA
GCGTGAAGGCCGCTACTGGGTGTATGTTAAATCCCCGGATGGGTTTATCGAGCAAACGGTTACCCCCGGCAGTCGCAGCC
TGAATCGAACCGTGATCCTTGAAGGCCTGAAAGAAGGGGATGTGGTCGCCCTGACAGTACCGCGCAGGAGAACACAGGCA
TGA

Upstream 100 bases:

>100_bases
TTCTGGGTGACAGTCGCCAATACGTGGCGCTGGGCGATTCAGGTCGCGACAGGGTGGTAGTGCTTTCCGGTTTGGCATTG
GGGGATGAGGTGATTCTGAA

Downstream 100 bases:

>100_bases
TGCAGGATACTTTTAATCAATATCGGGCGGGCGTGGTACAAGCATTGGGTGAGATGCTGCACCACAAGTTACGCACGGCG
CTGACACTGCTGGGGATGAT

Product: membrane-fusion protein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; RND Family Efflux Transporter MFP Subunit; Multidrug Resistance Efflux Pump-Like Protein; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; HlyD Family Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKRLMLLPLLPLALLAGCQESTETAVLTMKVSRSDFKVEIPARGELEAKSATPVSVPGGLRGPQSLAWVLDNFSEVKAGD
VVARLDGRRETLELELEKYDFDKLALDGDIQVEKNLTTAQELVIGRDVTEEELSLSERFFTDDERVYTKIDIIDQMRNKD
YLQARLGYFDWGKGSHDAQATAELDLIRLKQKGIQAKIATYQNNLSQMEITAPHDGLFVMQPGWSGALPMAGDMVWSGIP
LGTLPDTSVMQAKLWVLESEAVGLAVDKPVVLTLDAYPDRPFTGKVTQVDALAKPKDRDSPVNYFEFTVALDNTDTQIML
PGRQVQARVSALSEDQVLAVPNQAIFQREGRYWVYVKSPDGFIEQTVTPGSRSLNRTVILEGLKEGDVVALTVPRRRTQA

Sequences:

>Translated_400_residues
MKRLMLLPLLPLALLAGCQESTETAVLTMKVSRSDFKVEIPARGELEAKSATPVSVPGGLRGPQSLAWVLDNFSEVKAGD
VVARLDGRRETLELELEKYDFDKLALDGDIQVEKNLTTAQELVIGRDVTEEELSLSERFFTDDERVYTKIDIIDQMRNKD
YLQARLGYFDWGKGSHDAQATAELDLIRLKQKGIQAKIATYQNNLSQMEITAPHDGLFVMQPGWSGALPMAGDMVWSGIP
LGTLPDTSVMQAKLWVLESEAVGLAVDKPVVLTLDAYPDRPFTGKVTQVDALAKPKDRDSPVNYFEFTVALDNTDTQIML
PGRQVQARVSALSEDQVLAVPNQAIFQREGRYWVYVKSPDGFIEQTVTPGSRSLNRTVILEGLKEGDVVALTVPRRRTQA
>Mature_400_residues
MKRLMLLPLLPLALLAGCQESTETAVLTMKVSRSDFKVEIPARGELEAKSATPVSVPGGLRGPQSLAWVLDNFSEVKAGD
VVARLDGRRETLELELEKYDFDKLALDGDIQVEKNLTTAQELVIGRDVTEEELSLSERFFTDDERVYTKIDIIDQMRNKD
YLQARLGYFDWGKGSHDAQATAELDLIRLKQKGIQAKIATYQNNLSQMEITAPHDGLFVMQPGWSGALPMAGDMVWSGIP
LGTLPDTSVMQAKLWVLESEAVGLAVDKPVVLTLDAYPDRPFTGKVTQVDALAKPKDRDSPVNYFEFTVALDNTDTQIML
PGRQVQARVSALSEDQVLAVPNQAIFQREGRYWVYVKSPDGFIEQTVTPGSRSLNRTVILEGLKEGDVVALTVPRRRTQA

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44367; Mature: 44367

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLMLLPLLPLALLAGCQESTETAVLTMKVSRSDFKVEIPARGELEAKSATPVSVPGGL
CCCEEHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEECCCCC
RGPQSLAWVLDNFSEVKAGDVVARLDGRRETLELELEKYDFDKLALDGDIQVEKNLTTAQ
CCHHHHHHHHHCHHHCCCCCEEEECCCCCEEEEEEEEECCCCEEEECCCEEEECCCCHHH
ELVIGRDVTEEELSLSERFFTDDERVYTKIDIIDQMRNKDYLQARLGYFDWGKGSHDAQA
HHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCHHHHHHCCEEECCCCCCCCCH
TAELDLIRLKQKGIQAKIATYQNNLSQMEITAPHDGLFVMQPGWSGALPMAGDMVWSGIP
HHHHHEEEEHHCCCEEEEEEHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEECCCC
LGTLPDTSVMQAKLWVLESEAVGLAVDKPVVLTLDAYPDRPFTGKVTQVDALAKPKDRDS
CCCCCCCHHEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCEEEEHHCCCCCCCCC
PVNYFEFTVALDNTDTQIMLPGRQVQARVSALSEDQVLAVPNQAIFQREGRYWVYVKSPD
CCCEEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCEEECCCHHHHCCCCCEEEEEECCC
GFIEQTVTPGSRSLNRTVILEGLKEGDVVALTVPRRRTQA
CHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHCCC
>Mature Secondary Structure
MKRLMLLPLLPLALLAGCQESTETAVLTMKVSRSDFKVEIPARGELEAKSATPVSVPGGL
CCCEEHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEECCCCC
RGPQSLAWVLDNFSEVKAGDVVARLDGRRETLELELEKYDFDKLALDGDIQVEKNLTTAQ
CCHHHHHHHHHCHHHCCCCCEEEECCCCCEEEEEEEEECCCCEEEECCCEEEECCCCHHH
ELVIGRDVTEEELSLSERFFTDDERVYTKIDIIDQMRNKDYLQARLGYFDWGKGSHDAQA
HHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCHHHHHHCCEEECCCCCCCCCH
TAELDLIRLKQKGIQAKIATYQNNLSQMEITAPHDGLFVMQPGWSGALPMAGDMVWSGIP
HHHHHEEEEHHCCCEEEEEEHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEECCCC
LGTLPDTSVMQAKLWVLESEAVGLAVDKPVVLTLDAYPDRPFTGKVTQVDALAKPKDRDS
CCCCCCCHHEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCEEEEHHCCCCCCCCC
PVNYFEFTVALDNTDTQIMLPGRQVQARVSALSEDQVLAVPNQAIFQREGRYWVYVKSPD
CCCEEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCEEECCCHHHHCCCCCEEEEEECCC
GFIEQTVTPGSRSLNRTVILEGLKEGDVVALTVPRRRTQA
CHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA