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The map label for this gene is 119774592

Identifier: 119774592

GI number: 119774592

Start: 1765629

End: 1766477

Strand: Direct

Name: 119774592

Synonym: Sama_1455

Alternate gene names: NA

Gene position: 1765629-1766477 (Clockwise)

Preceding gene: 119774591

Following gene: 119774593

Centisome position: 41.0

GC content: 50.88

Gene sequence:

>849_bases
ATGAAACGTGCTCTGGCAGTAATGGGTTTGGCGCTTTTTTTACTCGCGGGTTGTTCAACCAAGATGAGTTACTACTTCCT
CGATTGGGCAATCGAGTGGGAGCTTGATGACTATGTTGATTTAAACCGCGACCAGCAGAAGCAATTTGATGCGGTGTTGG
ATGAGTTTATTGACTGGCATCGCCGTGAGGAGCTGCCCCGCTATGTGGCTCAGCTGGAAAGCATCAAGCAACAGATGCAA
TCCGGTACCTTAACGCCCGCCGCCTGGGCCGAAGAGGTCAACTACGCTCAGTCTCATTGGTTTCGGCTGTTTGAACATGT
ATTTGAAGGCATCTTGCCCATTGTCCAGAGTTTCTCAGACGAGCAGGTGGCCGGTATTATCAAACAGCTTCGTGAGGAAG
AGGCCAAGCTGGTGGCCGAATATGCCGGTAAAACACAGGAAGAGTTGATTGCCGACTCGGATGAGCGGCTCACCGAGCGG
GCCGAAAAGTGGATAGGCAAGTTGTCGGACAAGCAAAAAGCCATGATCCATGCGTCCAATACATCCAGGCTGTCGACTCT
GGATATGTGGCTTGAATACCGTCACGAATGGCTCAGACAGTTTGAAACGGCCCTCAATCAAAGAGCTGATACCGCCTTGC
TGCGCAGCAGACTGCAACTCCTCATGACAGCCCCGCAAACCCTGAAGTCAGAGAAACATCAGCAGGCGGTGCGCGAAAAC
AGCGAGAATTTTGGTCGTTTGGTGATGGACATTTATCGAGACTTGTCTGATAAGCAACGAAAGAAGCTTTGGCACGAATA
CGATGCTCTGACCAAGGATCTGGCTGAGCTTGCCAACGAACCTGATTAA

Upstream 100 bases:

>100_bases
CTGGTTTCACAGATACTTACAATTGGCCAAGAGTTGACGCCTTGTCCATTTCCGCTGGCCCTTGTTACCCTTCGCTAAGC
CATAACAGAAAAGGACATCT

Downstream 100 bases:

>100_bases
ACTGGCAACAAATTGCTGGCCGCAGACAAGGTATTCTGCGGCTTTATTCAATAAACAGGCTTTAGCAATAAACAGGCACC
TGCAATAAAGATGGGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase III Alpha Subunit; Rare Lipoprotein A

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKRALAVMGLALFLLAGCSTKMSYYFLDWAIEWELDDYVDLNRDQQKQFDAVLDEFIDWHRREELPRYVAQLESIKQQMQ
SGTLTPAAWAEEVNYAQSHWFRLFEHVFEGILPIVQSFSDEQVAGIIKQLREEEAKLVAEYAGKTQEELIADSDERLTER
AEKWIGKLSDKQKAMIHASNTSRLSTLDMWLEYRHEWLRQFETALNQRADTALLRSRLQLLMTAPQTLKSEKHQQAVREN
SENFGRLVMDIYRDLSDKQRKKLWHEYDALTKDLAELANEPD

Sequences:

>Translated_282_residues
MKRALAVMGLALFLLAGCSTKMSYYFLDWAIEWELDDYVDLNRDQQKQFDAVLDEFIDWHRREELPRYVAQLESIKQQMQ
SGTLTPAAWAEEVNYAQSHWFRLFEHVFEGILPIVQSFSDEQVAGIIKQLREEEAKLVAEYAGKTQEELIADSDERLTER
AEKWIGKLSDKQKAMIHASNTSRLSTLDMWLEYRHEWLRQFETALNQRADTALLRSRLQLLMTAPQTLKSEKHQQAVREN
SENFGRLVMDIYRDLSDKQRKKLWHEYDALTKDLAELANEPD
>Mature_282_residues
MKRALAVMGLALFLLAGCSTKMSYYFLDWAIEWELDDYVDLNRDQQKQFDAVLDEFIDWHRREELPRYVAQLESIKQQMQ
SGTLTPAAWAEEVNYAQSHWFRLFEHVFEGILPIVQSFSDEQVAGIIKQLREEEAKLVAEYAGKTQEELIADSDERLTER
AEKWIGKLSDKQKAMIHASNTSRLSTLDMWLEYRHEWLRQFETALNQRADTALLRSRLQLLMTAPQTLKSEKHQQAVREN
SENFGRLVMDIYRDLSDKQRKKLWHEYDALTKDLAELANEPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33178; Mature: 33178

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALAVMGLALFLLAGCSTKMSYYFLDWAIEWELDDYVDLNRDQQKQFDAVLDEFIDWH
CCHHHHHHHHHHHHHHCCCHHHHHEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHH
RREELPRYVAQLESIKQQMQSGTLTPAAWAEEVNYAQSHWFRLFEHVFEGILPIVQSFSD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EQVAGIIKQLREEEAKLVAEYAGKTQEELIADSDERLTERAEKWIGKLSDKQKAMIHASN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCC
TSRLSTLDMWLEYRHEWLRQFETALNQRADTALLRSRLQLLMTAPQTLKSEKHQQAVREN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
SENFGRLVMDIYRDLSDKQRKKLWHEYDALTKDLAELANEPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRALAVMGLALFLLAGCSTKMSYYFLDWAIEWELDDYVDLNRDQQKQFDAVLDEFIDWH
CCHHHHHHHHHHHHHHCCCHHHHHEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHH
RREELPRYVAQLESIKQQMQSGTLTPAAWAEEVNYAQSHWFRLFEHVFEGILPIVQSFSD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EQVAGIIKQLREEEAKLVAEYAGKTQEELIADSDERLTERAEKWIGKLSDKQKAMIHASN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCC
TSRLSTLDMWLEYRHEWLRQFETALNQRADTALLRSRLQLLMTAPQTLKSEKHQQAVREN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
SENFGRLVMDIYRDLSDKQRKKLWHEYDALTKDLAELANEPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA