Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774591

Identifier: 119774591

GI number: 119774591

Start: 1764537

End: 1765565

Strand: Direct

Name: 119774591

Synonym: Sama_1454

Alternate gene names: NA

Gene position: 1764537-1765565 (Clockwise)

Preceding gene: 119774590

Following gene: 119774592

Centisome position: 40.98

GC content: 57.53

Gene sequence:

>1029_bases
ATGACAATCCCTCTGGAGATTGAGTCAAGGGAGGGATCCGGGATTAAATCGCTTCCGGGTGTTACCGAAGAGGTGCTGGC
ATTTATCGCCGATACGGGGCTTTTCGCCGATGGGTATCGCCTAAAGCCTTTGACCCGCGGCCTCAGCAATCATAACCTGG
CGCTCTTTGCCCGCGAAGGCGCCTATGTCCTTCGGGTGAACCGTGATGAGAGCAGCGCCTTTTGTCAGCGGGCCTTTGAA
GCCGAGAACTGGCGCCTGGCAGCGTCAGCGGGACTTGCCCCGACCTTGGTGGCCCAAAGCATTGATGGTCGCTGCTATCT
CTCGCCTTTATTGGAGGACGGCGGCTGGCAACAGCGTTATCAGGAAGTCCCTCTGAGTCAAATCACCTGTGACGCGGCTT
TTTTTACATCGCCCGGTCAAACACATGCCGGGAGTGACAGGGAGCCGGATGGTCTCACACACACGACCAGGCTGCTGCTC
GACCTGCTGCTGGGATTGCAGGCTCTACCTGTGCCCGCGAATGTGAAGGGTTTTACCACCCAGTGGCAGGATTATGAGAC
GGCGTTGGATGCGAGCCAATCGCACTGGGCCCGCAATCCCCGCTGGCAGGAGGCCTATCAGGCACTGGCGGCAGAATTTA
CCGAGGTCGAGGCTGCCATGGCGCGCCTCGATGCGATGGGACTTTCTTGCCAGTACAGTCATCGGGATCTCACACCCCAT
AATTTACTTTGCCACCAGGGCAAATTGTTTTGCATTGATTTCGAATATGCCTGCGCCTCGCACCCCCTTTGGGATCTCGC
CGCTGTGCTGGCAAGCCACAATTTGCCGGGGCGAGAGCGCCGTGACCTGATGGACGCCTACCTTTATGCCCATCCGCAGC
TGGAGTCCTCCATGTCATCAAGGGTTGTGGATGCGGTGGCGCTTCATTGGTATTTCGGGGCCATCTGGGCGCTGCTGATG
GCTGGGCAATCTGGGGACGACGACTATCTTTGCTGGTTTCACAGATACTTACAATTGGCCAAGAGTTGA

Upstream 100 bases:

>100_bases
CCCTGCTGTTTGTGTTTTACGTGGGGCTGGCGGTGGCTGGTTATTTTGTATGGCGTGCTGCTGCGGCCGAGCAGCGTCCC
CCTGAGCTGGCGCTTAATTC

Downstream 100 bases:

>100_bases
CGCCTTGTCCATTTCCGCTGGCCCTTGTTACCCTTCGCTAAGCCATAACAGAAAAGGACATCTATGAAACGTGCTCTGGC
AGTAATGGGTTTGGCGCTTT

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase Family Protein

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTIPLEIESREGSGIKSLPGVTEEVLAFIADTGLFADGYRLKPLTRGLSNHNLALFAREGAYVLRVNRDESSAFCQRAFE
AENWRLAASAGLAPTLVAQSIDGRCYLSPLLEDGGWQQRYQEVPLSQITCDAAFFTSPGQTHAGSDREPDGLTHTTRLLL
DLLLGLQALPVPANVKGFTTQWQDYETALDASQSHWARNPRWQEAYQALAAEFTEVEAAMARLDAMGLSCQYSHRDLTPH
NLLCHQGKLFCIDFEYACASHPLWDLAAVLASHNLPGRERRDLMDAYLYAHPQLESSMSSRVVDAVALHWYFGAIWALLM
AGQSGDDDYLCWFHRYLQLAKS

Sequences:

>Translated_342_residues
MTIPLEIESREGSGIKSLPGVTEEVLAFIADTGLFADGYRLKPLTRGLSNHNLALFAREGAYVLRVNRDESSAFCQRAFE
AENWRLAASAGLAPTLVAQSIDGRCYLSPLLEDGGWQQRYQEVPLSQITCDAAFFTSPGQTHAGSDREPDGLTHTTRLLL
DLLLGLQALPVPANVKGFTTQWQDYETALDASQSHWARNPRWQEAYQALAAEFTEVEAAMARLDAMGLSCQYSHRDLTPH
NLLCHQGKLFCIDFEYACASHPLWDLAAVLASHNLPGRERRDLMDAYLYAHPQLESSMSSRVVDAVALHWYFGAIWALLM
AGQSGDDDYLCWFHRYLQLAKS
>Mature_341_residues
TIPLEIESREGSGIKSLPGVTEEVLAFIADTGLFADGYRLKPLTRGLSNHNLALFAREGAYVLRVNRDESSAFCQRAFEA
ENWRLAASAGLAPTLVAQSIDGRCYLSPLLEDGGWQQRYQEVPLSQITCDAAFFTSPGQTHAGSDREPDGLTHTTRLLLD
LLLGLQALPVPANVKGFTTQWQDYETALDASQSHWARNPRWQEAYQALAAEFTEVEAAMARLDAMGLSCQYSHRDLTPHN
LLCHQGKLFCIDFEYACASHPLWDLAAVLASHNLPGRERRDLMDAYLYAHPQLESSMSSRVVDAVALHWYFGAIWALLMA
GQSGDDDYLCWFHRYLQLAKS

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38114; Mature: 37983

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPLEIESREGSGIKSLPGVTEEVLAFIADTGLFADGYRLKPLTRGLSNHNLALFAREG
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCHHHCCCCCCCEEEEEECC
AYVLRVNRDESSAFCQRAFEAENWRLAASAGLAPTLVAQSIDGRCYLSPLLEDGGWQQRY
EEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCEEEEHHHCCCCHHHHH
QEVPLSQITCDAAFFTSPGQTHAGSDREPDGLTHTTRLLLDLLLGLQALPVPANVKGFTT
HHCCHHHEEECHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QWQDYETALDASQSHWARNPRWQEAYQALAAEFTEVEAAMARLDAMGLSCQYSHRDLTPH
CHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH
NLLCHQGKLFCIDFEYACASHPLWDLAAVLASHNLPGRERRDLMDAYLYAHPQLESSMSS
HHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
RVVDAVALHWYFGAIWALLMAGQSGDDDYLCWFHRYLQLAKS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIPLEIESREGSGIKSLPGVTEEVLAFIADTGLFADGYRLKPLTRGLSNHNLALFAREG
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCHHHCCCCCCCEEEEEECC
AYVLRVNRDESSAFCQRAFEAENWRLAASAGLAPTLVAQSIDGRCYLSPLLEDGGWQQRY
EEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCEEEEHHHCCCCHHHHH
QEVPLSQITCDAAFFTSPGQTHAGSDREPDGLTHTTRLLLDLLLGLQALPVPANVKGFTT
HHCCHHHEEECHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QWQDYETALDASQSHWARNPRWQEAYQALAAEFTEVEAAMARLDAMGLSCQYSHRDLTPH
CHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH
NLLCHQGKLFCIDFEYACASHPLWDLAAVLASHNLPGRERRDLMDAYLYAHPQLESSMSS
HHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
RVVDAVALHWYFGAIWALLMAGQSGDDDYLCWFHRYLQLAKS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA