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The map label for this gene is fdx [H]

Identifier: 119774139

GI number: 119774139

Start: 1214144

End: 1214395

Strand: Reverse

Name: fdx [H]

Synonym: Sama_1002

Alternate gene names: 119774139

Gene position: 1214395-1214144 (Counterclockwise)

Preceding gene: 119774141

Following gene: 119774135

Centisome position: 28.2

GC content: 55.95

Gene sequence:

>252_bases
ATGGCCTTAATAATTGACGACAGCTGTATTAACTGCGATATGTGCGAACCCGAGTGTCCCAACCAGGCGATAGCCATGGG
CGCTGAGATTTACGAAATCGACCCGGATCGCTGCACCGAGTGTGTGGGCCATTACGACAAGCCGACCTGTGTGTCTGTTT
GCCCCATCAACTGCATCGACCCCGACCCGGCGCACCCTGAGAGTCAGGATGAGCTGCTGATAAAATACGCCCGCCTCACC
GGCAAGCTCTGA

Upstream 100 bases:

>100_bases
CAGCACAGGCACATCGTTACCAATTGGGAATGGCATTAGGCCAGCAATTTTGAGTGACGCAGCCGTTCACGGCAGATAAA
TTTTGAGGTTTTTCAAGGCC

Downstream 100 bases:

>100_bases
GGTCTCACCTGCTAACATTAAGGCTTCACCGGTAAACACCAAGTCAGTCTTGGCCCACGTTACTGGGCTTGGCCACACGG
CTACCGGTGCGAGTCACCCC

Product: ferredoxin, 4Fe-4S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MALIIDDSCINCDMCEPECPNQAIAMGAEIYEIDPDRCTECVGHYDKPTCVSVCPINCIDPDPAHPESQDELLIKYARLT
GKL

Sequences:

>Translated_83_residues
MALIIDDSCINCDMCEPECPNQAIAMGAEIYEIDPDRCTECVGHYDKPTCVSVCPINCIDPDPAHPESQDELLIKYARLT
GKL
>Mature_82_residues
ALIIDDSCINCDMCEPECPNQAIAMGAEIYEIDPDRCTECVGHYDKPTCVSVCPINCIDPDPAHPESQDELLIKYARLTG
KL

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=80, Percent_Identity=62.5, Blast_Score=105, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9160; Mature: 9028

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
14.5 %Cys+Met (Translated Protein)
11.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
13.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIIDDSCINCDMCEPECPNQAIAMGAEIYEIDPDRCTECVGHYDKPTCVSVCPINCID
CEEEECCCCCCCCCCCCCCCCHHEECCCEEEEECHHHHHHHHCCCCCCCEEEECCCCCCC
PDPAHPESQDELLIKYARLTGKL
CCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALIIDDSCINCDMCEPECPNQAIAMGAEIYEIDPDRCTECVGHYDKPTCVSVCPINCID
EEEECCCCCCCCCCCCCCCCHHEECCCEEEEECHHHHHHHHCCCCCCCEEEECCCCCCC
PDPAHPESQDELLIKYARLTGKL
CCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]