Click here to switch to the map view.

The map label for this gene is yegQ [C]

Identifier: 119774141

GI number: 119774141

Start: 1215224

End: 1216621

Strand: Reverse

Name: yegQ [C]

Synonym: Sama_1004

Alternate gene names: 119774141

Gene position: 1216621-1215224 (Counterclockwise)

Preceding gene: 119774144

Following gene: 119774139

Centisome position: 28.25

GC content: 56.22

Gene sequence:

>1398_bases
ATGTTTAAACCTGAGCTTCTGTCGCCGGCAGGCACACTGAAAAACATGCGCTACGCCTTTGCCTATGGTGCAGATGCCGT
GTATGCGGGTCAGCCCAGATACAGTCTGCGCGTCCGCAACAACGACTTTAAACTGGAAAACCTGAAGACAGGTATTGAAG
AGGCTCACAGCCTTGGCAAAAAATTGTATGTGGTGAGCAACATTGCCCCCCACAACGCCAAGCTGAAAACCTATCTCGAC
GACATGGCGCCCGTGGTTGCCATGAAGCCGGACGCCCTCATCATGTCAGACCCAGGCCTGATTATGATGGTACGCGAAGC
CTTCCCTGACCAGGTCGTGCACCTGTCGGTACAGGCCAATGCCATCAACTGGGCCTCGGTTAAGTTCTGGCAGTCGGTTG
GCATCAAGCGCGTTATTCTGTCCCGCGAGCTGTCGCTGGATGAAATCGAAGAAATCCGTCAGCGCTGCCCGGACATCGAG
CTCGAAGTGTTCGTACACGGCGCCCTGTGTATGGCCTACTCTGGCCGCTGCCTACTGTCTGGCTATATTAACAAGCGCGA
CCCCAACCAGGGCACCTGCACCAATGCTTGCCGTTGGAAGTATGACGCCCACGAAGCCACCGAAAACGAAGCCGGTGACG
TTGTGGCCATCCACACCCCGGAAAGTGCCGTGCAGCTGGAAACCCCAACGCTCGGAAACGGCCCTGCCACCGACAAAATC
TTCCTGCTGCAGGAAGAAAACCGTCCCGGGGAATACATGCCAGCCTTTGAAGACGAGCATGGCACCTACATCATGAACTC
CAAAGATCTGCGTGCCATCCAGCACGTGGAGCGTCTGGCCAAAATTGGCGTGGATTCACTGAAAATTGAAGGCCGTACCA
AGTCCTTCTACTACGTGGCCCGTACTGCTCAGCTGTACCGTCAGGCCATTGAAGATGCCGTGGCCGGTCGTGGTTTTGAC
CCACACCTGATGACCCGCCTCGAAGGTCTGGCTCACCGCGGTTACACCGAGGGCTTCCTGCGTCGCCACGTGCACGATGA
ATACCAGAACTACGACTACGGCTATTCCATCAGCGACAGCCAGCAGTTTGTGGGTGAATTTACCGGTAAGCGCAACGAAG
CAGGCCTGGCCGAAATCGATGTGAAAAACAAGTTCATTGTGGGCGACAGTGTTGAGCTGATGACCCCCCAGGGCAATATC
AACCTGACCGTAGACACCCTCTACAACCGTAAGGGTGAAGCCGTTGATGCCGGTCTGGGTTCAGGCCACATGGTGTACCT
GCCGGTGCCTGCCGAGGTGGATGTGAACATGGGCGTGCTGCTGCGCAACCTGCCAAACGGCAACAACACCCGTAATCCAC
ACGGCGAAGCGGAAGTGATCCCCACCAAGGTGGAATAA

Upstream 100 bases:

>100_bases
ATCCGACCTACGCACTCAGATTTGCACTGAGGGGCTATGATTGAGTAAAATGCCGCCCCCGCGAGTCGCGTCCACTTTTA
TACTTTCTTCGGGAATGAAT

Downstream 100 bases:

>100_bases
TCATCGCCATGCATGAAAAAGGCTGCGATTTTCGCAGCCTTTTTTATTGCACCAAACCCTAAGGGTAGATGGACCGAGAG
CGCCCAAAACCACCTGAGTG

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKLENLKTGIEEAHSLGKKLYVVSNIAPHNAKLKTYLD
DMAPVVAMKPDALIMSDPGLIMMVREAFPDQVVHLSVQANAINWASVKFWQSVGIKRVILSRELSLDEIEEIRQRCPDIE
LEVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWKYDAHEATENEAGDVVAIHTPESAVQLETPTLGNGPATDKI
FLLQEENRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKIGVDSLKIEGRTKSFYYVARTAQLYRQAIEDAVAGRGFD
PHLMTRLEGLAHRGYTEGFLRRHVHDEYQNYDYGYSISDSQQFVGEFTGKRNEAGLAEIDVKNKFIVGDSVELMTPQGNI
NLTVDTLYNRKGEAVDAGLGSGHMVYLPVPAEVDVNMGVLLRNLPNGNNTRNPHGEAEVIPTKVE

Sequences:

>Translated_465_residues
MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKLENLKTGIEEAHSLGKKLYVVSNIAPHNAKLKTYLD
DMAPVVAMKPDALIMSDPGLIMMVREAFPDQVVHLSVQANAINWASVKFWQSVGIKRVILSRELSLDEIEEIRQRCPDIE
LEVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWKYDAHEATENEAGDVVAIHTPESAVQLETPTLGNGPATDKI
FLLQEENRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKIGVDSLKIEGRTKSFYYVARTAQLYRQAIEDAVAGRGFD
PHLMTRLEGLAHRGYTEGFLRRHVHDEYQNYDYGYSISDSQQFVGEFTGKRNEAGLAEIDVKNKFIVGDSVELMTPQGNI
NLTVDTLYNRKGEAVDAGLGSGHMVYLPVPAEVDVNMGVLLRNLPNGNNTRNPHGEAEVIPTKVE
>Mature_465_residues
MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKLENLKTGIEEAHSLGKKLYVVSNIAPHNAKLKTYLD
DMAPVVAMKPDALIMSDPGLIMMVREAFPDQVVHLSVQANAINWASVKFWQSVGIKRVILSRELSLDEIEEIRQRCPDIE
LEVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWKYDAHEATENEAGDVVAIHTPESAVQLETPTLGNGPATDKI
FLLQEENRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKIGVDSLKIEGRTKSFYYVARTAQLYRQAIEDAVAGRGFD
PHLMTRLEGLAHRGYTEGFLRRHVHDEYQNYDYGYSISDSQQFVGEFTGKRNEAGLAEIDVKNKFIVGDSVELMTPQGNI
NLTVDTLYNRKGEAVDAGLGSGHMVYLPVPAEVDVNMGVLLRNLPNGNNTRNPHGEAEVIPTKVE

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=456, Percent_Identity=71.9298245614035, Blast_Score=672, Evalue=0.0,
Organism=Escherichia coli, GI87081910, Length=386, Percent_Identity=27.979274611399, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1789548, Length=322, Percent_Identity=29.5031055900621, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 51942; Mature: 51942

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKLENLKTGIEEAHSLGK
CCCCCCCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCEEEHHHHHHHHHHHHCCC
KLYVVSNIAPHNAKLKTYLDDMAPVVAMKPDALIMSDPGLIMMVREAFPDQVVHLSVQAN
EEEEEECCCCCCCHHHHHHHHHCCEEEECCCEEEEECCCEEEEEECCCCCEEEEEEEEEC
AINWASVKFWQSVGIKRVILSRELSLDEIEEIRQRCPDIELEVFVHGALCMAYSGRCLLS
CEEEHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHCCCCEEEE
GYINKRDPNQGTCTNACRWKYDAHEATENEAGDVVAIHTPESAVQLETPTLGNGPATDKI
ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEE
FLLQEENRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKIGVDSLKIEGRTKSFYYVA
EEEEECCCCCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEH
RTAQLYRQAIEDAVAGRGFDPHLMTRLEGLAHRGYTEGFLRRHVHDEYQNYDYGYSISDS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCH
QQFVGEFTGKRNEAGLAEIDVKNKFIVGDSVELMTPQGNINLTVDTLYNRKGEAVDAGLG
HHHHHHHCCCCCCCCEEEEECCCEEEECCCEEEECCCCCEEEEEEEEECCCCCEEECCCC
SGHMVYLPVPAEVDVNMGVLLRNLPNGNNTRNPHGEAEVIPTKVE
CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKLENLKTGIEEAHSLGK
CCCCCCCCCCHHHHCCEEEEEECCCEEEECCCCEEEEEECCCEEEHHHHHHHHHHHHCCC
KLYVVSNIAPHNAKLKTYLDDMAPVVAMKPDALIMSDPGLIMMVREAFPDQVVHLSVQAN
EEEEEECCCCCCCHHHHHHHHHCCEEEECCCEEEEECCCEEEEEECCCCCEEEEEEEEEC
AINWASVKFWQSVGIKRVILSRELSLDEIEEIRQRCPDIELEVFVHGALCMAYSGRCLLS
CEEEHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEHCCCCEEEE
GYINKRDPNQGTCTNACRWKYDAHEATENEAGDVVAIHTPESAVQLETPTLGNGPATDKI
ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEE
FLLQEENRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKIGVDSLKIEGRTKSFYYVA
EEEEECCCCCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEH
RTAQLYRQAIEDAVAGRGFDPHLMTRLEGLAHRGYTEGFLRRHVHDEYQNYDYGYSISDS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCH
QQFVGEFTGKRNEAGLAEIDVKNKFIVGDSVELMTPQGNINLTVDTLYNRKGEAVDAGLG
HHHHHHHCCCCCCCCEEEEECCCEEEECCCEEEECCCCCEEEEEEEEECCCCCEEECCCC
SGHMVYLPVPAEVDVNMGVLLRNLPNGNNTRNPHGEAEVIPTKVE
CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]