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The map label for this gene is yhbV [H]

Identifier: 119774134

GI number: 119774134

Start: 1209323

End: 1210159

Strand: Reverse

Name: yhbV [H]

Synonym: Sama_0997

Alternate gene names: 119774134

Gene position: 1210159-1209323 (Counterclockwise)

Preceding gene: 119774135

Following gene: 119774132

Centisome position: 28.1

GC content: 55.2

Gene sequence:

>837_bases
ATGAAATCCAGTCTGGGTCCCCTGCTCTACTGTTGGGACAAAGCCAAAGTTTTTGAGTTTTACCGGGCAATAGCCCAAAG
CGATATCGCGTTGGTGTATCTGGGTGAAGCGGTATGCAGTCGCCGGCGCGAGCTGAAAACCAGCGACTATCTGACATTGG
CCCGCGAACTGCGGGATGCCGGTAAAGAGGTGGTGCTCACCAGTCTGGCTTTGATTGAAGCCGCTGGAGAATTGACTGAA
CTTAAAAAACTGGTCAGTAACGGCGAGTTTATCATCGAAGCCAACGACATGGCCGCAGTACACCATGCCCGCGAAGCGGC
AGTACCCTTTGTGTGTGGCCCCCACATCAACCTTTACAATGCCGCCAGCATCCGCAAACTGGCCGACTGGGGGATGCAGC
GCTTTGTCATGCCGGTCGAACTTTCCCGTGATTGGCTGGCTGAGGTTTTGAGCCAGCTGGGTTCGTCACGGCCCGAAGTA
GAGGTGTTGGGCCACGGGCACATACCACTTGCCCACTCGGCTCGCTGTTTTACTGCCCGCCACCATGGCCTGGCTAAAGA
TGGTTGTCAGATAATCTGCAAAAACCACAGCAAGGGCCTCTTGGTGCAAACTCAGGAATCTCAGCCGCTGCTCAGGCTCA
ACGGCATCCAAACCCAGTCTGCGGCCTGTGTGAATCTGGCCAGCGAATGGCACAATATGGCCGCGATGGGCGTGGATTGG
TTCCGGATTTCCCCAAGTGGCATGTCGCTGCCAAACCTGGAAATCTCCACCCCGCTATCGGGGAATGAATGTAATGGATA
CTGGTTTGGTGAAGCGGGATTTAATCAGGCCGTCTGA

Upstream 100 bases:

>100_bases
AGGTTCAGGCCGACTGGGACAGGGCGCTGGGTAAATTATCCGAAGGCCAAATCACCACGCTGGGCGCCTATGAGCGTCGC
TGGCAGTAAGGAACAAGCGT

Downstream 100 bases:

>100_bases
AGAGTTCGGCTTGCCACAGCAGCATGGTGACCAGGCTTAACCATTGCAGTGTGGCGGGCCACCAAAACGCTGGCCTTGGG
TAGGGGGAATAAACTTCTTC

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKSSLGPLLYCWDKAKVFEFYRAIAQSDIALVYLGEAVCSRRRELKTSDYLTLARELRDAGKEVVLTSLALIEAAGELTE
LKKLVSNGEFIIEANDMAAVHHAREAAVPFVCGPHINLYNAASIRKLADWGMQRFVMPVELSRDWLAEVLSQLGSSRPEV
EVLGHGHIPLAHSARCFTARHHGLAKDGCQIICKNHSKGLLVQTQESQPLLRLNGIQTQSAACVNLASEWHNMAAMGVDW
FRISPSGMSLPNLEISTPLSGNECNGYWFGEAGFNQAV

Sequences:

>Translated_278_residues
MKSSLGPLLYCWDKAKVFEFYRAIAQSDIALVYLGEAVCSRRRELKTSDYLTLARELRDAGKEVVLTSLALIEAAGELTE
LKKLVSNGEFIIEANDMAAVHHAREAAVPFVCGPHINLYNAASIRKLADWGMQRFVMPVELSRDWLAEVLSQLGSSRPEV
EVLGHGHIPLAHSARCFTARHHGLAKDGCQIICKNHSKGLLVQTQESQPLLRLNGIQTQSAACVNLASEWHNMAAMGVDW
FRISPSGMSLPNLEISTPLSGNECNGYWFGEAGFNQAV
>Mature_278_residues
MKSSLGPLLYCWDKAKVFEFYRAIAQSDIALVYLGEAVCSRRRELKTSDYLTLARELRDAGKEVVLTSLALIEAAGELTE
LKKLVSNGEFIIEANDMAAVHHAREAAVPFVCGPHINLYNAASIRKLADWGMQRFVMPVELSRDWLAEVLSQLGSSRPEV
EVLGHGHIPLAHSARCFTARHHGLAKDGCQIICKNHSKGLLVQTQESQPLLRLNGIQTQSAACVNLASEWHNMAAMGVDW
FRISPSGMSLPNLEISTPLSGNECNGYWFGEAGFNQAV

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=289, Percent_Identity=46.3667820069204, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 30605; Mature: 30605

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLGPLLYCWDKAKVFEFYRAIAQSDIALVYLGEAVCSRRRELKTSDYLTLARELRDA
CCCCCCCEEEEECHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHC
GKEVVLTSLALIEAAGELTELKKLVSNGEFIIEANDMAAVHHAREAAVPFVCGPHINLYN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEECCCCCEEC
AASIRKLADWGMQRFVMPVELSRDWLAEVLSQLGSSRPEVEVLGHGHIPLAHSARCFTAR
HHHHHHHHHHHHHHEEEEHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHH
HHGLAKDGCQIICKNHSKGLLVQTQESQPLLRLNGIQTQSAACVNLASEWHNMAAMGVDW
HCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEE
FRISPSGMSLPNLEISTPLSGNECNGYWFGEAGFNQAV
EEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MKSSLGPLLYCWDKAKVFEFYRAIAQSDIALVYLGEAVCSRRRELKTSDYLTLARELRDA
CCCCCCCEEEEECHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHC
GKEVVLTSLALIEAAGELTELKKLVSNGEFIIEANDMAAVHHAREAAVPFVCGPHINLYN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEECCCCCEEC
AASIRKLADWGMQRFVMPVELSRDWLAEVLSQLGSSRPEVEVLGHGHIPLAHSARCFTAR
HHHHHHHHHHHHHHEEEEHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHH
HHGLAKDGCQIICKNHSKGLLVQTQESQPLLRLNGIQTQSAACVNLASEWHNMAAMGVDW
HCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEE
FRISPSGMSLPNLEISTPLSGNECNGYWFGEAGFNQAV
EEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]