The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774052

Identifier: 119774052

GI number: 119774052

Start: 1105589

End: 1107955

Strand: Reverse

Name: 119774052

Synonym: Sama_0915

Alternate gene names: NA

Gene position: 1107955-1105589 (Counterclockwise)

Preceding gene: 119774056

Following gene: 119774051

Centisome position: 25.73

GC content: 51.42

Gene sequence:

>2367_bases
ATGACTCAACAGCACGAGATTACCGCACTGAAGAAATTTGTGCGGGCCACTAACTTTCTAGCCACCTCACAGATTTATCT
CAAGCAGAATGTGTTACACAAGCGACCACTGGTTCACGGAGATATCAAACCCAGACTGCTCGGTCACTGGGGTACCTGTC
CCGGCATCAATTTTGTTTATGCCAACGTCAACCGTCTCATCGTAAAACACAAGCGCCCCTTCCTCTATTTAGTTGGCCCA
GGCCATGGCTTCCCTGCTGTTCAGGCAAACCTGTTTATTGAAGGCTCACTGAGTCACTTCTACCCCGAAACCATTCCGTA
CAATGAAACCGGCATCGAAGATATCTGTAAGAAATTTTCAGCCGCCTACGGTTATCCTTCACATGCCAACCCAGAAGCGC
CAGGACAAATTCTGGAGGGTGGTGAGCTGGGTTATTCCTTGTCTGTAGGTTTTGGTGCCGTGCTGGACAACCCCGATCTG
ATTGCCACCGTGCTCGTTGGGGACGGTGAGTCCGAGACCGGCCCCCTGGCCGCGTCCTGGTACGCCAACCGCCTGGTCAA
CCCAGCCACTTGCGGCGCTGTACTGCCAATCGTGCACATTAACGGGTACAAGATCTCAGGCCCAACCCGCATGGGTCGTA
TGAGCCACGAAGAACTGGATCTTGAATTCCGCGGTCTGGGTTATCACCCCATCATTGTGGACGATCAGCTGGAAGAAGAT
GTCTATGAGCAAATGGTCAAGGCCATGGATCTCTCCTATGAGATGATTAATGACATCCAAACCCGTGCCCGAAATGGTGA
AGACGTTTGTAAGCCACGCTGGCCGGTGATCCTGATGCGCACCGCCAAAGGTTGGACTGGTGTAGCCGAAGACAAGGGTA
AGAAACTTGAAGGTAACTGTGAATCGCACCAGGTTATCGTCAATAAGTGCGCCACAGATAAAGGCCACCTCGAAGCCTTG
GATAACTGGCTGGCAAGCTATGGATTTGCAGAGCTTTGCAGCGTGACAGAACAGGGCGAACTCCAGTTTGACCCCGATAT
CAAGTCACTTATCCCGCCCAAAGAACTCTGCTGTGGTCGTCAACGCCTGTCCTATGGTGGCGAAGTAGTCCGTGCACTGA
CCAACCCCGATCTGACCAAGTTGGCTTACGGCGCAGAAGTACCACGTGGTCATCGTGGCTACTCCATGAATAAAATGGGC
GAGTGGATGCGTGAAGCCTTCAAACTGAACCGCGATCAGCGCAATCTGCGCATCTTCAGTCCGGATGAAACATACTCCAA
CCAGCTGCAAGCCGTATTTGAAGAAACCGATCGCGCGTGGCAGTGGCCTATCGAAAGTTGGGACCAGGACATGAGCCGCG
ACGGCCGCGTGTTGGAGCTGCTGTCTGAAAACCTGCTGTTTGGTATGATGCACGGATACACGGTAACGGGTCGTCACGGT
ATGTTCCCAACCTATGAGGCCTTCTCGCAGGTGGTCTCTTCAATGGCGGACCAATACTGTAAATACGTTTACGCAAGCCA
GGGCGTCCATTTCCGTAAGCCACTGCCATCCTGCAACGTCGTACTTTCTTCTCTGCTTGAGCGTCAGGATCACAACGGTT
ATTCGCACCAGAACCCCAGCTTCCTCGGTGCCATGCTGGAAAAACACCCAGAGATCATTTCTGCCTATCTGCCAGCCGAT
GCCAACAGCACTCTGGTTTATACCGAGCGTGCGTATGCTGACCGCGACAAATTGAACATCATTGTTGCAGGTAAGAAAGA
GCTGCCTCAATGGTTGACCCTGGATGAAGCCCGTCGCCAAGCCAAAGATGGTCTGATGATTTGGGACTTTGCCTCTGATG
ACAACCCGGATGTGGTACTGGCGGGCTGTGGTGACTACGCCACCCAGGAGTGTATGGCTTCATTGGTACTGATTCGCGAA
TTGCTGCCACGGGTACGTTTACGCTTCGTAAGTGTGTCTGAACTCAACTCCAATGGCCTTGGCAGTCGTAAGTTCCAGCA
AAAGCCCTGGATGATGGACGAAATCTTTACCAAAGATAAAGGCGTGGTGTTCAACTACCACGGTTATCCAAACACCATCA
AGAAACTGGTATTCGATTACAAAGGTAGCCACAGATTCCGCATTAAGGGCTATGAAGAGGAAGGTTCCACAACCACACCA
TTCGATATGGGCGTGCGAAATGGCACTTCACGCTATCACCTGGTAATCGATATGGCCTATAAATTGTTCCAGCAAGGGAT
TATCGATGAAACCCAACATGTGGCCATCACCACAGATATGCTGCAACGTTTGGTTGACCATAAGAATTATATTAAGGCCA
ATGGCGTAGATCCGATTCACATCGAAAATTGGGTGTGGACCCGTTAA

Upstream 100 bases:

>100_bases
GAATTTGGATGTGGGGCACATTTTTGTAATAAATTTACAAATATAGTACTCACCAAGAAGCAGATTCCACTTAACCATTT
TAAGCATCGAGAGGCTTATT

Downstream 100 bases:

>100_bases
AATTGTTATAATTCTGTGAATTATAAGACGCCCCTCGTGGGTGTCTTTTTATTTTTTAATTAAAAGGAACTTTGTACTGT
AGAAATTCAATTATTTAGCA

Product: putative phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 788; Mature: 787

Protein sequence:

>788_residues
MTQQHEITALKKFVRATNFLATSQIYLKQNVLHKRPLVHGDIKPRLLGHWGTCPGINFVYANVNRLIVKHKRPFLYLVGP
GHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFSAAYGYPSHANPEAPGQILEGGELGYSLSVGFGAVLDNPDL
IATVLVGDGESETGPLAASWYANRLVNPATCGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDDQLEED
VYEQMVKAMDLSYEMINDIQTRARNGEDVCKPRWPVILMRTAKGWTGVAEDKGKKLEGNCESHQVIVNKCATDKGHLEAL
DNWLASYGFAELCSVTEQGELQFDPDIKSLIPPKELCCGRQRLSYGGEVVRALTNPDLTKLAYGAEVPRGHRGYSMNKMG
EWMREAFKLNRDQRNLRIFSPDETYSNQLQAVFEETDRAWQWPIESWDQDMSRDGRVLELLSENLLFGMMHGYTVTGRHG
MFPTYEAFSQVVSSMADQYCKYVYASQGVHFRKPLPSCNVVLSSLLERQDHNGYSHQNPSFLGAMLEKHPEIISAYLPAD
ANSTLVYTERAYADRDKLNIIVAGKKELPQWLTLDEARRQAKDGLMIWDFASDDNPDVVLAGCGDYATQECMASLVLIRE
LLPRVRLRFVSVSELNSNGLGSRKFQQKPWMMDEIFTKDKGVVFNYHGYPNTIKKLVFDYKGSHRFRIKGYEEEGSTTTP
FDMGVRNGTSRYHLVIDMAYKLFQQGIIDETQHVAITTDMLQRLVDHKNYIKANGVDPIHIENWVWTR

Sequences:

>Translated_788_residues
MTQQHEITALKKFVRATNFLATSQIYLKQNVLHKRPLVHGDIKPRLLGHWGTCPGINFVYANVNRLIVKHKRPFLYLVGP
GHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFSAAYGYPSHANPEAPGQILEGGELGYSLSVGFGAVLDNPDL
IATVLVGDGESETGPLAASWYANRLVNPATCGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDDQLEED
VYEQMVKAMDLSYEMINDIQTRARNGEDVCKPRWPVILMRTAKGWTGVAEDKGKKLEGNCESHQVIVNKCATDKGHLEAL
DNWLASYGFAELCSVTEQGELQFDPDIKSLIPPKELCCGRQRLSYGGEVVRALTNPDLTKLAYGAEVPRGHRGYSMNKMG
EWMREAFKLNRDQRNLRIFSPDETYSNQLQAVFEETDRAWQWPIESWDQDMSRDGRVLELLSENLLFGMMHGYTVTGRHG
MFPTYEAFSQVVSSMADQYCKYVYASQGVHFRKPLPSCNVVLSSLLERQDHNGYSHQNPSFLGAMLEKHPEIISAYLPAD
ANSTLVYTERAYADRDKLNIIVAGKKELPQWLTLDEARRQAKDGLMIWDFASDDNPDVVLAGCGDYATQECMASLVLIRE
LLPRVRLRFVSVSELNSNGLGSRKFQQKPWMMDEIFTKDKGVVFNYHGYPNTIKKLVFDYKGSHRFRIKGYEEEGSTTTP
FDMGVRNGTSRYHLVIDMAYKLFQQGIIDETQHVAITTDMLQRLVDHKNYIKANGVDPIHIENWVWTR
>Mature_787_residues
TQQHEITALKKFVRATNFLATSQIYLKQNVLHKRPLVHGDIKPRLLGHWGTCPGINFVYANVNRLIVKHKRPFLYLVGPG
HGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFSAAYGYPSHANPEAPGQILEGGELGYSLSVGFGAVLDNPDLI
ATVLVGDGESETGPLAASWYANRLVNPATCGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDDQLEEDV
YEQMVKAMDLSYEMINDIQTRARNGEDVCKPRWPVILMRTAKGWTGVAEDKGKKLEGNCESHQVIVNKCATDKGHLEALD
NWLASYGFAELCSVTEQGELQFDPDIKSLIPPKELCCGRQRLSYGGEVVRALTNPDLTKLAYGAEVPRGHRGYSMNKMGE
WMREAFKLNRDQRNLRIFSPDETYSNQLQAVFEETDRAWQWPIESWDQDMSRDGRVLELLSENLLFGMMHGYTVTGRHGM
FPTYEAFSQVVSSMADQYCKYVYASQGVHFRKPLPSCNVVLSSLLERQDHNGYSHQNPSFLGAMLEKHPEIISAYLPADA
NSTLVYTERAYADRDKLNIIVAGKKELPQWLTLDEARRQAKDGLMIWDFASDDNPDVVLAGCGDYATQECMASLVLIREL
LPRVRLRFVSVSELNSNGLGSRKFQQKPWMMDEIFTKDKGVVFNYHGYPNTIKKLVFDYKGSHRFRIKGYEEEGSTTTPF
DMGVRNGTSRYHLVIDMAYKLFQQGIIDETQHVAITTDMLQRLVDHKNYIKANGVDPIHIENWVWTR

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 89178; Mature: 89046

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQHEITALKKFVRATNFLATSQIYLKQNVLHKRPLVHGDIKPRLLGHWGTCPGINFVY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEE
ANVNRLIVKHKRPFLYLVGPGHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFS
ECHHHHEEECCCCEEEEEECCCCCCCEEEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHH
AAYGYPSHANPEAPGQILEGGELGYSLSVGFGAVLDNPDLIATVLVGDGESETGPLAASW
HHCCCCCCCCCCCCCHHCCCCCCCEEEECCCCEEECCCCEEEEEEEECCCCCCCCEEHHH
YANRLVNPATCGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDDQLEED
HHHHCCCCHHCCCEEEEEEECCEEECCCCHHCCCCCHHCCEEEECCCCCCEEECCHHHHH
VYEQMVKAMDLSYEMINDIQTRARNGEDVCKPRWPVILMRTAKGWTGVAEDKGKKLEGNC
HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ESHQVIVNKCATDKGHLEALDNWLASYGFAELCSVTEQGELQFDPDIKSLIPPKELCCGR
CCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCHHHHCCCHHHHCCH
QRLSYGGEVVRALTNPDLTKLAYGAEVPRGHRGYSMNKMGEWMREAFKLNRDQRNLRIFS
HHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEC
PDETYSNQLQAVFEETDRAWQWPIESWDQDMSRDGRVLELLSENLLFGMMHGYTVTGRHG
CCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCC
MFPTYEAFSQVVSSMADQYCKYVYASQGVHFRKPLPSCNVVLSSLLERQDHNGYSHQNPS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCHH
FLGAMLEKHPEIISAYLPADANSTLVYTERAYADRDKLNIIVAGKKELPQWLTLDEARRQ
HHHHHHHHCHHHHEEECCCCCCCEEEEEEHHHCCCCCEEEEEECCCCCCHHCCHHHHHHH
AKDGLMIWDFASDDNPDVVLAGCGDYATQECMASLVLIRELLPRVRLRFVSVSELNSNGL
HHCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCC
GSRKFQQKPWMMDEIFTKDKGVVFNYHGYPNTIKKLVFDYKGSHRFRIKGYEEEGSTTTP
CCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
FDMGVRNGTSRYHLVIDMAYKLFQQGIIDETQHVAITTDMLQRLVDHKNYIKANGVDPIH
HHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCEEECCCCCCEE
IENWVWTR
ECCCEECC
>Mature Secondary Structure 
TQQHEITALKKFVRATNFLATSQIYLKQNVLHKRPLVHGDIKPRLLGHWGTCPGINFVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEE
ANVNRLIVKHKRPFLYLVGPGHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFS
ECHHHHEEECCCCEEEEEECCCCCCCEEEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHH
AAYGYPSHANPEAPGQILEGGELGYSLSVGFGAVLDNPDLIATVLVGDGESETGPLAASW
HHCCCCCCCCCCCCCHHCCCCCCCEEEECCCCEEECCCCEEEEEEEECCCCCCCCEEHHH
YANRLVNPATCGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDDQLEED
HHHHCCCCHHCCCEEEEEEECCEEECCCCHHCCCCCHHCCEEEECCCCCCEEECCHHHHH
VYEQMVKAMDLSYEMINDIQTRARNGEDVCKPRWPVILMRTAKGWTGVAEDKGKKLEGNC
HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ESHQVIVNKCATDKGHLEALDNWLASYGFAELCSVTEQGELQFDPDIKSLIPPKELCCGR
CCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCHHHHCCCHHHHCCH
QRLSYGGEVVRALTNPDLTKLAYGAEVPRGHRGYSMNKMGEWMREAFKLNRDQRNLRIFS
HHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEC
PDETYSNQLQAVFEETDRAWQWPIESWDQDMSRDGRVLELLSENLLFGMMHGYTVTGRHG
CCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCC
MFPTYEAFSQVVSSMADQYCKYVYASQGVHFRKPLPSCNVVLSSLLERQDHNGYSHQNPS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCHH
FLGAMLEKHPEIISAYLPADANSTLVYTERAYADRDKLNIIVAGKKELPQWLTLDEARRQ
HHHHHHHHCHHHHEEECCCCCCCEEEEEEHHHCCCCCEEEEEECCCCCCHHCCHHHHHHH
AKDGLMIWDFASDDNPDVVLAGCGDYATQECMASLVLIRELLPRVRLRFVSVSELNSNGL
HHCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCC
GSRKFQQKPWMMDEIFTKDKGVVFNYHGYPNTIKKLVFDYKGSHRFRIKGYEEEGSTTTP
CCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
FDMGVRNGTSRYHLVIDMAYKLFQQGIIDETQHVAITTDMLQRLVDHKNYIKANGVDPIH
HHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCEEECCCCCCEE
IENWVWTR
ECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA