The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774040

Identifier: 119774040

GI number: 119774040

Start: 1090676

End: 1091053

Strand: Reverse

Name: 119774040

Synonym: Sama_0903

Alternate gene names: NA

Gene position: 1091053-1090676 (Counterclockwise)

Preceding gene: 119774041

Following gene: 119774038

Centisome position: 25.34

GC content: 55.29

Gene sequence:

>378_bases
ATGCTCAAAAAGCCACTCTACGAAAGTCTCCCCTACCTGTGCATGTTGTGTGCAACTGCAACCCTGCTTTGGCAACAAAA
CACCCTCGCCCTGGCTGCAGGACTACTGCTGTTTTTTGTGGGGGCTCGGGTCTATATCCTTCGCTCTGACAATCGCCGCA
CCGATCCGGCGCGCAAACGAAAAAAAGGTGGCTTGCCCAAGGGACTCTATGAGCTGTTGCCATTTGCTTGCCTGGCGCTC
AGCTTTGTCCTGCTCGCTCAACCCGGCAGTGCCTGGCTTATCTTTCCTGCGTTAATGCTGCTGGCATACGGGCTCTATGT
GCTCGCAAGCCGGTCGAGCTATCGAGATCACCAGTTACCCTCTCAGGGCCGGTTCTAA

Upstream 100 bases:

>100_bases
TTAAATTTATGCAAAACGCCGATCTCTTTTGAATCGGCGTTTTCTTTTGGCCTAATATAAAGCCCGGCACGGACTGCCGA
TATTAAAAAAGGACCTTTAT

Downstream 100 bases:

>100_bases
TCAGCGGATATCGGCGGGGTCCGTTACTATCAATTTGGCTATCACAGCACGCTCAGCCTCATTCATGTGCTTGAGGTAAT
TAGAGCAACGGGTGATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLKKPLYESLPYLCMLCATATLLWQQNTLALAAGLLLFFVGARVYILRSDNRRTDPARKRKKGGLPKGLYELLPFACLAL
SFVLLAQPGSAWLIFPALMLLAYGLYVLASRSSYRDHQLPSQGRF

Sequences:

>Translated_125_residues
MLKKPLYESLPYLCMLCATATLLWQQNTLALAAGLLLFFVGARVYILRSDNRRTDPARKRKKGGLPKGLYELLPFACLAL
SFVLLAQPGSAWLIFPALMLLAYGLYVLASRSSYRDHQLPSQGRF
>Mature_125_residues
MLKKPLYESLPYLCMLCATATLLWQQNTLALAAGLLLFFVGARVYILRSDNRRTDPARKRKKGGLPKGLYELLPFACLAL
SFVLLAQPGSAWLIFPALMLLAYGLYVLASRSSYRDHQLPSQGRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14024; Mature: 14024

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKPLYESLPYLCMLCATATLLWQQNTLALAAGLLLFFVGARVYILRSDNRRTDPARKR
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHH
KKGGLPKGLYELLPFACLALSFVLLAQPGSAWLIFPALMLLAYGLYVLASRSSYRDHQLP
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SQGRF
CCCCC
>Mature Secondary Structure
MLKKPLYESLPYLCMLCATATLLWQQNTLALAAGLLLFFVGARVYILRSDNRRTDPARKR
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHH
KKGGLPKGLYELLPFACLALSFVLLAQPGSAWLIFPALMLLAYGLYVLASRSSYRDHQLP
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SQGRF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA