The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773981

Identifier: 119773981

GI number: 119773981

Start: 1028794

End: 1029216

Strand: Reverse

Name: 119773981

Synonym: Sama_0844

Alternate gene names: NA

Gene position: 1029216-1028794 (Counterclockwise)

Preceding gene: 119773982

Following gene: 119773978

Centisome position: 23.9

GC content: 54.37

Gene sequence:

>423_bases
ATGACAGAGCAGAGCATACCCAAGGCAACGCCCATGCCCAAGCGACTGATAGCATTGATGTTGCTCTATACTGCTGCGGC
AGTGAGTGGCATTGTTGCCAAACAGGGCGTGATCTTTTGCCTGTTGACCTTGCTGATGGTGGTGGCGGTGTTTGCCCGCC
AACGCGCTGGCTTGTGGTTTCTGAGGGGTTACACCGTGCTGCAACTTGCCATGGTCAGCCTGCTGCCTTTCATTCTGGAC
CAAGGGGATGATGTGGCCACAGGCCCCAACACCCTGAACCTTGCCGGAATGCCCTTCGAGGCATCGGACTATGCCATTTT
TGCCGTCCTGATTGGGTTGTGCATGGTGCAGGTTTGGCTGGTATTTACGCCCAAGGTAGGCAAGTTTTTCAATCGGGCTC
AAAACTTCAACCTGATGAGCTGA

Upstream 100 bases:

>100_bases
GCGGTATTCCCGGTTCAGGATGATTTGGGCGTAGTGGTGCCCCCCTGGGAGCTTGAGAGCCGCCTGCAGCCCAAGACCCG
CCACTGATTAAGGGGAAACC

Downstream 100 bases:

>100_bases
GGTACCAGCCTGCGAAAGGTTAAGCTACCGAATAGCCAAATAAAAAAGCCGCCCTGGGGCGGCTTTTTTATTTATGGGCA
AAACAGCTTACACAGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTEQSIPKATPMPKRLIALMLLYTAAAVSGIVAKQGVIFCLLTLLMVVAVFARQRAGLWFLRGYTVLQLAMVSLLPFILD
QGDDVATGPNTLNLAGMPFEASDYAIFAVLIGLCMVQVWLVFTPKVGKFFNRAQNFNLMS

Sequences:

>Translated_140_residues
MTEQSIPKATPMPKRLIALMLLYTAAAVSGIVAKQGVIFCLLTLLMVVAVFARQRAGLWFLRGYTVLQLAMVSLLPFILD
QGDDVATGPNTLNLAGMPFEASDYAIFAVLIGLCMVQVWLVFTPKVGKFFNRAQNFNLMS
>Mature_139_residues
TEQSIPKATPMPKRLIALMLLYTAAAVSGIVAKQGVIFCLLTLLMVVAVFARQRAGLWFLRGYTVLQLAMVSLLPFILDQ
GDDVATGPNTLNLAGMPFEASDYAIFAVLIGLCMVQVWLVFTPKVGKFFNRAQNFNLMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15347; Mature: 15216

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQSIPKATPMPKRLIALMLLYTAAAVSGIVAKQGVIFCLLTLLMVVAVFARQRAGLWF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LRGYTVLQLAMVSLLPFILDQGDDVATGPNTLNLAGMPFEASDYAIFAVLIGLCMVQVWL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
VFTPKVGKFFNRAQNFNLMS
HHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TEQSIPKATPMPKRLIALMLLYTAAAVSGIVAKQGVIFCLLTLLMVVAVFARQRAGLWF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LRGYTVLQLAMVSLLPFILDQGDDVATGPNTLNLAGMPFEASDYAIFAVLIGLCMVQVWL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
VFTPKVGKFFNRAQNFNLMS
HHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA