| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is pepA2 [H]
Identifier: 119773932
GI number: 119773932
Start: 979556
End: 981064
Strand: Reverse
Name: pepA2 [H]
Synonym: Sama_0795
Alternate gene names: 119773932
Gene position: 981064-979556 (Counterclockwise)
Preceding gene: 119773935
Following gene: 119773929
Centisome position: 22.78
GC content: 56.99
Gene sequence:
>1509_bases ATGGAGTTTAGCGTAAAGAGCGGCAGCCCGGAAAAACAACGCTCAGCGTGCATTGTTGTGGGTGTATACGAACCCCGCCG TTTGTCCGGCATCGCAGAGCAACTGGACAAAATCAGCGAAGGTTATATCAGCAATCTGTTGCGTCGTGGTGATCTGGAAG GCAAGCCAGGCCAGATGCTGCTTCTGCACCACGTCCCCAACGTGCTCAGTGAGCGTGTTCTCTTGGTTGGTTGTGGTAAA GAGCGCGAGCTGGACGAGCGTCAATACAAGCAAATCATCGCCAAGACCATCAACACCCTTAACGAAACTGGTTCCATGGA AGCCGTGTGTTTTCTGACCGAGCTGCACGTTAAAGGTCGCGATACCTATTGGAAAGTGCGTCAGGCCGTAGAAACCACGC AAAACAGCCTCTACAGCTTCGATACCCTGAAAAGCCGTAAAGGCGAGACCCGTCGTCCACTTCGCAAACTGGTGTTCAAC GTGCCTACACGCCGTGAACTGACCGTTGGCGAGCGCGCCATCGAGCACGGTGTTGCCGTAGCCTCGGGTATGCACCTGTG CCGCGACGTGGCCAACATGCCGCCTAACATCTGTAATCCGGCTTACCTCGCCTCTCAGGCCCGTCAGCTGGCCGAAGTAC ACGAAAACCTGCAGGTATCTACTGTGGGTGAAGAGCAAATGGCCAAACTGGGCATGAACTCTTACCTCGCCGTGGGCCGC GGCAGTGCCAATGAGTCCATCATGACTGTGATGGAGTACAAGGGCGCCGTGGACAGCACCGCCAAGCCAATCGTGCTGGT AGGTAAAGGCCTGACTTTCGATTCCGGCGGTATCTCTCTCAAGCCAGGCGAAGCCATGGACGAGATGAAGTACGACATGG GCGGCGCCGCTGGCGTTATCGGTACCATGAAGGCTATCTGCGAAATGAAGCTGCCGCTGAACGTAGTGGGTATTCTGGCT GGCTGTGAAAACATGCCTTCCGGCAATGCATACCGTCCAGGCGACATCCTCACTACCATGAGCGGTCAAACCGTGGAAGT GCTGAACACTGACGCCGAAGGCCGTCTGGTTCTGTGCGATGTGCTGACCTACGTTGAGCGTTTCGACCCTGAACTGGTGG TCGATACCGCCACCCTGACCGGTGCCTGTGTGATCGCGCTTGGTAAGCATGCCTCTGGCCTCTTCTCTTCCCACAATCCG CTGGCACACGAGCTGCTGAGCGCCGGTGAGCAAAGTGGTGACCGCGCCTGGCGCATGCCACTGTGGGATGAGTATCAGGA CATGCTGGACAGTCCGTTTGCCGACATGACCAACCTCGGTGGCCGTCCGGCGGGCTCCATCACCGCCGCCTGTTTCCTGT CGCGCTTTGCCAAGAAATACAACTGGGCACACCTTGACGTAGCAGGTACTGCCTGGAACAGCGGTGCCAACAAGGGCTCT ACCGGTCGTCCGGTTCCTCTGTTGACTCAGTTCCTGATAAACCGCGCCGGTGTAGAACAGGGCGAATAA
Upstream 100 bases:
>100_bases AGTAACAGGCCTTGGCGCAGAAACTTAGGCCCGATTTCGGGCACAAGCAGGCATTATCCAATAAATATAAAAATTTGTCT TTAAGAATCTAGGAGTGCTC
Downstream 100 bases:
>100_bases GCCAAACAGCTGTGTTAAGCACATAAAAAAAGCGAAGCCCCGGGTTCGCTTTTTTGTTGCCCGTAATCCGTTATTTTCAG GACGCCTTGTCGATTCTCAG
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase 2; LAP 2; Leucyl aminopeptidase 2 [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MEFSVKSGSPEKQRSACIVVGVYEPRRLSGIAEQLDKISEGYISNLLRRGDLEGKPGQMLLLHHVPNVLSERVLLVGCGK ERELDERQYKQIIAKTINTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVETTQNSLYSFDTLKSRKGETRRPLRKLVFN VPTRRELTVGERAIEHGVAVASGMHLCRDVANMPPNICNPAYLASQARQLAEVHENLQVSTVGEEQMAKLGMNSYLAVGR GSANESIMTVMEYKGAVDSTAKPIVLVGKGLTFDSGGISLKPGEAMDEMKYDMGGAAGVIGTMKAICEMKLPLNVVGILA GCENMPSGNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFDPELVVDTATLTGACVIALGKHASGLFSSHNP LAHELLSAGEQSGDRAWRMPLWDEYQDMLDSPFADMTNLGGRPAGSITAACFLSRFAKKYNWAHLDVAGTAWNSGANKGS TGRPVPLLTQFLINRAGVEQGE
Sequences:
>Translated_502_residues MEFSVKSGSPEKQRSACIVVGVYEPRRLSGIAEQLDKISEGYISNLLRRGDLEGKPGQMLLLHHVPNVLSERVLLVGCGK ERELDERQYKQIIAKTINTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVETTQNSLYSFDTLKSRKGETRRPLRKLVFN VPTRRELTVGERAIEHGVAVASGMHLCRDVANMPPNICNPAYLASQARQLAEVHENLQVSTVGEEQMAKLGMNSYLAVGR GSANESIMTVMEYKGAVDSTAKPIVLVGKGLTFDSGGISLKPGEAMDEMKYDMGGAAGVIGTMKAICEMKLPLNVVGILA GCENMPSGNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFDPELVVDTATLTGACVIALGKHASGLFSSHNP LAHELLSAGEQSGDRAWRMPLWDEYQDMLDSPFADMTNLGGRPAGSITAACFLSRFAKKYNWAHLDVAGTAWNSGANKGS TGRPVPLLTQFLINRAGVEQGE >Mature_502_residues MEFSVKSGSPEKQRSACIVVGVYEPRRLSGIAEQLDKISEGYISNLLRRGDLEGKPGQMLLLHHVPNVLSERVLLVGCGK ERELDERQYKQIIAKTINTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVETTQNSLYSFDTLKSRKGETRRPLRKLVFN VPTRRELTVGERAIEHGVAVASGMHLCRDVANMPPNICNPAYLASQARQLAEVHENLQVSTVGEEQMAKLGMNSYLAVGR GSANESIMTVMEYKGAVDSTAKPIVLVGKGLTFDSGGISLKPGEAMDEMKYDMGGAAGVIGTMKAICEMKLPLNVVGILA GCENMPSGNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFDPELVVDTATLTGACVIALGKHASGLFSSHNP LAHELLSAGEQSGDRAWRMPLWDEYQDMLDSPFADMTNLGGRPAGSITAACFLSRFAKKYNWAHLDVAGTAWNSGANKGS TGRPVPLLTQFLINRAGVEQGE
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=490, Percent_Identity=33.8775510204082, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI47155554, Length=362, Percent_Identity=29.2817679558011, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1790710, Length=498, Percent_Identity=76.9076305220884, Blast_Score=813, Evalue=0.0, Organism=Escherichia coli, GI87082123, Length=311, Percent_Identity=39.871382636656, Blast_Score=190, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17556903, Length=290, Percent_Identity=32.7586206896552, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17565172, Length=385, Percent_Identity=27.7922077922078, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI20129969, Length=523, Percent_Identity=30.2103250478011, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI161077148, Length=501, Percent_Identity=29.5409181636727, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI20130057, Length=501, Percent_Identity=29.5409181636727, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI21355725, Length=324, Percent_Identity=33.9506172839506, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24662227, Length=508, Percent_Identity=29.9212598425197, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24661038, Length=324, Percent_Identity=34.2592592592593, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI21355645, Length=507, Percent_Identity=29.9802761341223, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24662223, Length=507, Percent_Identity=29.9802761341223, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI20129963, Length=507, Percent_Identity=28.9940828402367, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI19922386, Length=498, Percent_Identity=29.1164658634538, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI21357381, Length=290, Percent_Identity=32.7586206896552, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI221379063, Length=290, Percent_Identity=32.7586206896552, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI221379062, Length=290, Percent_Identity=32.7586206896552, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI24646701, Length=263, Percent_Identity=27.3764258555133, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24646703, Length=263, Percent_Identity=27.3764258555133, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI21358201, Length=263, Percent_Identity=27.3764258555133, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 54571; Mature: 54571
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSVKSGSPEKQRSACIVVGVYEPRRLSGIAEQLDKISEGYISNLLRRGDLEGKPGQML CCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LLHHVPNVLSERVLLVGCGKERELDERQYKQIIAKTINTLNETGSMEAVCFLTELHVKGR HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC DTYWKVRQAVETTQNSLYSFDTLKSRKGETRRPLRKLVFNVPTRRELTVGERAIEHGVAV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ASGMHLCRDVANMPPNICNPAYLASQARQLAEVHENLQVSTVGEEQMAKLGMNSYLAVGR HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCEEEECC GSANESIMTVMEYKGAVDSTAKPIVLVGKGLTFDSGGISLKPGEAMDEMKYDMGGAAGVI CCCCHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCEECCCCHHHHHHHHCCCHHHHH GTMKAICEMKLPLNVVGILAGCENMPSGNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCD HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEHHH VLTYVERFDPELVVDTATLTGACVIALGKHASGLFSSHNPLAHELLSAGEQSGDRAWRMP HHHHHHHCCCCEEEECHHHHCEEHEEECCCHHCCCCCCCHHHHHHHHCCCCCCCCEECCC LWDEYQDMLDSPFADMTNLGGRPAGSITAACFLSRFAKKYNWAHLDVAGTAWNSGANKGS CHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC TGRPVPLLTQFLINRAGVEQGE CCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEFSVKSGSPEKQRSACIVVGVYEPRRLSGIAEQLDKISEGYISNLLRRGDLEGKPGQML CCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE LLHHVPNVLSERVLLVGCGKERELDERQYKQIIAKTINTLNETGSMEAVCFLTELHVKGR HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC DTYWKVRQAVETTQNSLYSFDTLKSRKGETRRPLRKLVFNVPTRRELTVGERAIEHGVAV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ASGMHLCRDVANMPPNICNPAYLASQARQLAEVHENLQVSTVGEEQMAKLGMNSYLAVGR HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCEEEECC GSANESIMTVMEYKGAVDSTAKPIVLVGKGLTFDSGGISLKPGEAMDEMKYDMGGAAGVI CCCCHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCEECCCCHHHHHHHHCCCHHHHH GTMKAICEMKLPLNVVGILAGCENMPSGNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCD HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEHHH VLTYVERFDPELVVDTATLTGACVIALGKHASGLFSSHNPLAHELLSAGEQSGDRAWRMP HHHHHHHCCCCEEEECHHHHCEEHEEECCCHHCCCCCCCHHHHHHHHCCCCCCCCEECCC LWDEYQDMLDSPFADMTNLGGRPAGSITAACFLSRFAKKYNWAHLDVAGTAWNSGANKGS CHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC TGRPVPLLTQFLINRAGVEQGE CCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]