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The map label for this gene is 119773935

Identifier: 119773935

GI number: 119773935

Start: 983611

End: 984123

Strand: Reverse

Name: 119773935

Synonym: Sama_0798

Alternate gene names: NA

Gene position: 984123-983611 (Counterclockwise)

Preceding gene: 119773936

Following gene: 119773932

Centisome position: 22.85

GC content: 54.58

Gene sequence:

>513_bases
ATGATAAATCAAGAACATGCCAATTTTCCCCGCGCCGGCTTTTTCCGCCGTCTCGGGGCCATGGTGTACGACCTTATGTT
GGCAGCTGCGGTGTGGATCCTCGCGGGCGTGGTAAGCTTTGCCCTGTTTGCCGTGCTGGTGAATTCAGGCCTTATTGACC
GCGGTGGCCATGAGCATGTCATCGATGTGATGAATGCCAATCCCCTGTATCGCAATTTAAATTTTGCCTGGATACTGCTG
TGTGTGGCGATGTTTTATGTGGTGTTTTGGAGCCGCGGCGGCCAAACCCTCGGCATGCGTGCCTGGCGTTTGAAGGTGCA
GCACCCCAACGGCCAAAACCTCAGCTTTATCGCCGCAGCCGCCCGTCTGGTATGGTCGCTGTTCGGACTGGGTAATCTGT
TTATCCTCATCAACCCCGATAAGCTGGCGCTGCAGGATAAGATGACCCGCTCCGAGGTCGTGGTATTGTCAGTGGAAGCC
AACCAGATGAAAAACTGGCACGGTATGCAGTAA

Upstream 100 bases:

>100_bases
CAAAGGCAAGGGCGCCCTCAAAAGCTACCGTTTGAACGAGTTTGCCCGCATGGGTTTTAAAGACATTCGCATGTTGCGGG
ACGATGAACAGGTCTGAATT

Downstream 100 bases:

>100_bases
CCCTTTTACGCTTATTATGGATTGCAGGTGTTATGGATTGCAGGTGTTATGTGCTGCATCCACAGGCCTCATGAAGGCGT
AAAACAGCAGCTAAACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; Proline-Rich Antigen; RDD Family; SecF Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MINQEHANFPRAGFFRRLGAMVYDLMLAAAVWILAGVVSFALFAVLVNSGLIDRGGHEHVIDVMNANPLYRNLNFAWILL
CVAMFYVVFWSRGGQTLGMRAWRLKVQHPNGQNLSFIAAAARLVWSLFGLGNLFILINPDKLALQDKMTRSEVVVLSVEA
NQMKNWHGMQ

Sequences:

>Translated_170_residues
MINQEHANFPRAGFFRRLGAMVYDLMLAAAVWILAGVVSFALFAVLVNSGLIDRGGHEHVIDVMNANPLYRNLNFAWILL
CVAMFYVVFWSRGGQTLGMRAWRLKVQHPNGQNLSFIAAAARLVWSLFGLGNLFILINPDKLALQDKMTRSEVVVLSVEA
NQMKNWHGMQ
>Mature_170_residues
MINQEHANFPRAGFFRRLGAMVYDLMLAAAVWILAGVVSFALFAVLVNSGLIDRGGHEHVIDVMNANPLYRNLNFAWILL
CVAMFYVVFWSRGGQTLGMRAWRLKVQHPNGQNLSFIAAAARLVWSLFGLGNLFILINPDKLALQDKMTRSEVVVLSVEA
NQMKNWHGMQ

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19133; Mature: 19133

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQEHANFPRAGFFRRLGAMVYDLMLAAAVWILAGVVSFALFAVLVNSGLIDRGGHEHV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
IDVMNANPLYRNLNFAWILLCVAMFYVVFWSRGGQTLGMRAWRLKVQHPNGQNLSFIAAA
EEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEEECCCCCCHHHHHHH
ARLVWSLFGLGNLFILINPDKLALQDKMTRSEVVVLSVEANQMKNWHGMQ
HHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEEEECHHHHCCCCCCC
>Mature Secondary Structure
MINQEHANFPRAGFFRRLGAMVYDLMLAAAVWILAGVVSFALFAVLVNSGLIDRGGHEHV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
IDVMNANPLYRNLNFAWILLCVAMFYVVFWSRGGQTLGMRAWRLKVQHPNGQNLSFIAAA
EEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEEECCCCCCHHHHHHH
ARLVWSLFGLGNLFILINPDKLALQDKMTRSEVVVLSVEANQMKNWHGMQ
HHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEEEECHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA