The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119773764

Identifier: 119773764

GI number: 119773764

Start: 778448

End: 779833

Strand: Reverse

Name: 119773764

Synonym: Sama_0626

Alternate gene names: NA

Gene position: 779833-778448 (Counterclockwise)

Preceding gene: 119773765

Following gene: 119773763

Centisome position: 18.11

GC content: 54.18

Gene sequence:

>1386_bases
ATGGTCCGCGCAATCTTGCTTTCATTACTGATGCTCCTGTCAGTTCCGGCATTTTCAGCCACAGAAGATCTCTCCACATC
GCCGGTCTGGCATCAGACCGATGCCGATGGCAAACCTGTGGTAAAGCTCTACTTTTTCTGGTCCAAGACCTGCCCTCACT
GCGCCGAAGCCCATCCTTTTATCGATGCATTGCCAGAGCAGTATCCCTGGATTTCCCTCGAGTCTTATATGATCACGGCG
CCCGGTGCCCGGGAGAAATGGCAGACCATTGCCAAAGCCACAGGCACGGACACCCGTTCTGTGCCCTTTTTTGCCATTTG
CGGAAAAGCCAGCGTGGGTTACAGCAGTGCGGATGTTACCGGGCAATATCTGGTCGGACGGCTAAAGGAATGCTATCGCA
GCCTTGGAGGCACAGTCGGTGATGATGGTCCGGCCATACATACAGCCAGCACAGGTGAGCAGCCACTGTTTGGCACCTGC
GACTCTTCATCTGAGGCGGGTACCTGTGACTTGGGTGCAGAGGTCACTGCCAGCAGTGATGTGCAGCCGGTTGAGCTGCC
CTTTATTGGGGTAGTCACACCGGACCAGTTATCACTGCCGCTGCTGACGCTGGTTCTGGCTGGTGTAGATGCCTTTAATC
CCTGCGCTTTTTTCGTGCTGCTGTTTTTGCTGTCCATTATGGTCAATGCCAAGAGCCGGAGTCGTATGCTGGTCGTCGGC
GGCATTTTCGTGTTCTTCTCAGGCTTTATTTACTTCCTGTTTATGACCGCCTGGCTCAACATGTTTGAACTGCTGGGCGC
CGATGGCGATGGTGGTAACATCATTCTCGCTGCGGGTTTGCTGGCACTGGTGGCCGGTACCATCAACGTCAAAGACTTCT
TCTTTGAGAAAGGCGAAGTGACCTTATCTATGTCGGCCGAAAAGCGCACTGGCCTGATTAAACGCATGGGTAAGCTGTCC
AGCGCCAGCTCCATGACCGCCATGATATTGGGCACCACAGTGCTGGCGATTCTGGCCAATGCCTACGAGCTGCTGTGCAC
TGCCGGCTTCCCGATGATTTATACCAGTGTGCTGGCCATGCACGAGCTGCCCGCAGCCGAGCGGTATTTTTATCTGGTGA
TGTACAACATCGTCTACGTGATCCCATTGGCACTGATTGTGCTGGTGTTTGCCCTGACACTGGGTAAACGCAAACTGAGC
GAGAAGGAGGGACAAACCCTCAAGCTGATGTCAGGCATCATGATGGTGGGCTTGGGTGGCATGCTGGTACTTGATCCCAC
CTCACTGCAAAATGTCGTGCTGGCGGTTGCGCTAATCCTGGGTTCCATCGGCATTACCAGCGTATTGATTATTGGGCGAA
AGTTACTTACCGCCCGTCAAGGCTGA

Upstream 100 bases:

>100_bases
ACAGTTTTGAAAGCATGATTTAGTCCGCCATGGGGAATTCAGTAAAGTAGAGTCAGAGGTTTTGTCTTTGCTTCCCACCA
CAGGTGGGTCTGGAGGCCAT

Downstream 100 bases:

>100_bases
GACCTGGGGCGCCACAATCCCTTGCAATGGGCCCTTGCAATGAGCAGCCGTGGCGCTAAAGTTTACTGCATGGTGGCCGA
TAAGCAGGTATCGACCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MVRAILLSLLMLLSVPAFSATEDLSTSPVWHQTDADGKPVVKLYFFWSKTCPHCAEAHPFIDALPEQYPWISLESYMITA
PGAREKWQTIAKATGTDTRSVPFFAICGKASVGYSSADVTGQYLVGRLKECYRSLGGTVGDDGPAIHTASTGEQPLFGTC
DSSSEAGTCDLGAEVTASSDVQPVELPFIGVVTPDQLSLPLLTLVLAGVDAFNPCAFFVLLFLLSIMVNAKSRSRMLVVG
GIFVFFSGFIYFLFMTAWLNMFELLGADGDGGNIILAAGLLALVAGTINVKDFFFEKGEVTLSMSAEKRTGLIKRMGKLS
SASSMTAMILGTTVLAILANAYELLCTAGFPMIYTSVLAMHELPAAERYFYLVMYNIVYVIPLALIVLVFALTLGKRKLS
EKEGQTLKLMSGIMMVGLGGMLVLDPTSLQNVVLAVALILGSIGITSVLIIGRKLLTARQG

Sequences:

>Translated_461_residues
MVRAILLSLLMLLSVPAFSATEDLSTSPVWHQTDADGKPVVKLYFFWSKTCPHCAEAHPFIDALPEQYPWISLESYMITA
PGAREKWQTIAKATGTDTRSVPFFAICGKASVGYSSADVTGQYLVGRLKECYRSLGGTVGDDGPAIHTASTGEQPLFGTC
DSSSEAGTCDLGAEVTASSDVQPVELPFIGVVTPDQLSLPLLTLVLAGVDAFNPCAFFVLLFLLSIMVNAKSRSRMLVVG
GIFVFFSGFIYFLFMTAWLNMFELLGADGDGGNIILAAGLLALVAGTINVKDFFFEKGEVTLSMSAEKRTGLIKRMGKLS
SASSMTAMILGTTVLAILANAYELLCTAGFPMIYTSVLAMHELPAAERYFYLVMYNIVYVIPLALIVLVFALTLGKRKLS
EKEGQTLKLMSGIMMVGLGGMLVLDPTSLQNVVLAVALILGSIGITSVLIIGRKLLTARQG
>Mature_461_residues
MVRAILLSLLMLLSVPAFSATEDLSTSPVWHQTDADGKPVVKLYFFWSKTCPHCAEAHPFIDALPEQYPWISLESYMITA
PGAREKWQTIAKATGTDTRSVPFFAICGKASVGYSSADVTGQYLVGRLKECYRSLGGTVGDDGPAIHTASTGEQPLFGTC
DSSSEAGTCDLGAEVTASSDVQPVELPFIGVVTPDQLSLPLLTLVLAGVDAFNPCAFFVLLFLLSIMVNAKSRSRMLVVG
GIFVFFSGFIYFLFMTAWLNMFELLGADGDGGNIILAAGLLALVAGTINVKDFFFEKGEVTLSMSAEKRTGLIKRMGKLS
SASSMTAMILGTTVLAILANAYELLCTAGFPMIYTSVLAMHELPAAERYFYLVMYNIVYVIPLALIVLVFALTLGKRKLS
EKEGQTLKLMSGIMMVGLGGMLVLDPTSLQNVVLAVALILGSIGITSVLIIGRKLLTARQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49408; Mature: 49408

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRAILLSLLMLLSVPAFSATEDLSTSPVWHQTDADGKPVVKLYFFWSKTCPHCAEAHPF
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHCCCH
IDALPEQYPWISLESYMITAPGAREKWQTIAKATGTDTRSVPFFAICGKASVGYSSADVT
HHHCCCCCCCEEECCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCH
GQYLVGRLKECYRSLGGTVGDDGPAIHTASTGEQPLFGTCDSSSEAGTCDLGAEVTASSD
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
VQPVELPFIGVVTPDQLSLPLLTLVLAGVDAFNPCAFFVLLFLLSIMVNAKSRSRMLVVG
CCEEECCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEH
GIFVFFSGFIYFLFMTAWLNMFELLGADGDGGNIILAAGLLALVAGTINVKDFFFEKGEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCE
TLSMSAEKRTGLIKRMGKLSSASSMTAMILGTTVLAILANAYELLCTAGFPMIYTSVLAM
EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HELPAAERYFYLVMYNIVYVIPLALIVLVFALTLGKRKLSEKEGQTLKLMSGIMMVGLGG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
MLVLDPTSLQNVVLAVALILGSIGITSVLIIGRKLLTARQG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVRAILLSLLMLLSVPAFSATEDLSTSPVWHQTDADGKPVVKLYFFWSKTCPHCAEAHPF
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHCCCH
IDALPEQYPWISLESYMITAPGAREKWQTIAKATGTDTRSVPFFAICGKASVGYSSADVT
HHHCCCCCCCEEECCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCH
GQYLVGRLKECYRSLGGTVGDDGPAIHTASTGEQPLFGTCDSSSEAGTCDLGAEVTASSD
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
VQPVELPFIGVVTPDQLSLPLLTLVLAGVDAFNPCAFFVLLFLLSIMVNAKSRSRMLVVG
CCEEECCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEH
GIFVFFSGFIYFLFMTAWLNMFELLGADGDGGNIILAAGLLALVAGTINVKDFFFEKGEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCE
TLSMSAEKRTGLIKRMGKLSSASSMTAMILGTTVLAILANAYELLCTAGFPMIYTSVLAM
EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HELPAAERYFYLVMYNIVYVIPLALIVLVFALTLGKRKLSEKEGQTLKLMSGIMMVGLGG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
MLVLDPTSLQNVVLAVALILGSIGITSVLIIGRKLLTARQG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA