| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773763
Identifier: 119773763
GI number: 119773763
Start: 778135
End: 778323
Strand: Reverse
Name: 119773763
Synonym: Sama_0625
Alternate gene names: NA
Gene position: 778323-778135 (Counterclockwise)
Preceding gene: 119773764
Following gene: 119773752
Centisome position: 18.07
GC content: 53.44
Gene sequence:
>189_bases ATGAGCATCAACAGCATTGAACCCAATCTCAGCCATGGCGCCATCGGTGTTAAGGTGGCACAACTGGCTAAAGATCAGCA AAAAGTGGAAGGGCAAATTGCCGTCGATCTGATTGCTGCCGCCACTGCGCCGGCTCCGAAAGCCGAACCCGTTGGCAACA TTGGCCACAATATCGATACCACCGCCTAA
Upstream 100 bases:
>100_bases CAATGGGCCCTTGCAATGAGCAGCCGTGGCGCTAAAGTTTACTGCATGGTGGCCGATAAGCAGGTATCGACCACATGCAG TCTGGAGGAATTTTCCGTCG
Downstream 100 bases:
>100_bases GCCCGGAAGCAGCCGCCTAGCGCGTCCGCCGTCCAGATAAGGCTTCATTCAAAAGCGCCTGTTGCTCTGCATCCTGGCGC TTTTACTTTTCTGCGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSINSIEPNLSHGAIGVKVAQLAKDQQKVEGQIAVDLIAAATAPAPKAEPVGNIGHNIDTTA
Sequences:
>Translated_62_residues MSINSIEPNLSHGAIGVKVAQLAKDQQKVEGQIAVDLIAAATAPAPKAEPVGNIGHNIDTTA >Mature_61_residues SINSIEPNLSHGAIGVKVAQLAKDQQKVEGQIAVDLIAAATAPAPKAEPVGNIGHNIDTTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6285; Mature: 6154
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINSIEPNLSHGAIGVKVAQLAKDQQKVEGQIAVDLIAAATAPAPKAEPVGNIGHNIDT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TA CC >Mature Secondary Structure SINSIEPNLSHGAIGVKVAQLAKDQQKVEGQIAVDLIAAATAPAPKAEPVGNIGHNIDT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA