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The map label for this gene is 119773684

Identifier: 119773684

GI number: 119773684

Start: 669483

End: 670568

Strand: Reverse

Name: 119773684

Synonym: Sama_0544

Alternate gene names: NA

Gene position: 670568-669483 (Counterclockwise)

Preceding gene: 119773685

Following gene: 119773681

Centisome position: 15.57

GC content: 50.74

Gene sequence:

>1086_bases
ATGAAGAAGACCCTTATCTCTGCATCTGTAGCATCGGTAATGGCCCTGGCATCATTCGGCGCACTGGCCGAAGGTCCTCA
GTTCTATGGCCGTCTTGATTTGTCAGTCACCAACACCGACGTAGGTACCACTGTGCAGTCTGGCACTAAAGGTATCAACA
CCAATGATTTTGCCAACGAGAACAACTCAGGCACCTACATCGAAAACAACTTCTCCTGGTTGGGTGTAAAAGGTACTGAG
AACATCAGCTCTGGTATCGATATCGTTTACCAAATGGAGTTCCAGGTAGAGAACACCTCTGGTTCAGGTGATACATTCAA
GCCACGTAACACTTATCTGGGTATCAAAACCAGCGCAGGTACCGTACTGGTAGGCCGCAACGACACAGTATTCAAGCAGT
CTGAAGGCGGCGTGGACCTGTTCGGTAACACCAACGCGGATATCGACCGTTTGGTTGCAGCACAAACCCGCAGCGCCGAC
GGTATCTGGTACTACTCTCCAGTGATCGCTGACCTGGTAACCCTGAATGCCACCTACCTGATGGAAGACAACAATGGCAG
CGACGACGCTCAGTATGCGTTGTCTGTTACCGTCGGTGACAAGGGCCTGAAGAAGCACAACTTCTACCTTGCCGGTGCCT
ACAACAAGGGCATCAGCAACGTCGATGCATACCGCGCAGTTGCTCAGGTAAAACTGGGTGATTTCAAGGTAGGCGGTCTG
TTCCAGAACACCGAGAAAGTGGACAGCGGCAACGACAACAACACTTACTTTGTCAACGTGGCTTACAACCTGAACGGTGT
AAACCTGAAAGCCGAATATGGCTACGATGAAAGTGGCATGGGCAAGTACTATGGTAACGTTGTTAAGTACACCGAAGTAG
TTGACGGTAAAGTCGTAAACAAGACACTGTCTGGTTCTGACATCGAAGTCACCAACATTACTCTGGGTGCCGACTACCGC
GCAGCCAAGTCTACCCTGTTGTTCGCTCACTATGCCATGTATGAAGGCAGCCACGTAACCGCTGGCCAGCGTGTTGACCT
GCAAGACGACAACGTGTTCACCGTGGGTGTACGTTACGACTTCTAA

Upstream 100 bases:

>100_bases
CAACTTTGTTACCAGGCTGTTTGCCTGTAGCAAACCAGAGGAAAACAACTCAATAACCATAAAAATGGAACAGAACTTCG
GTTCTAGGGAGCATGTAAAC

Downstream 100 bases:

>100_bases
GTCAAGGCTTCGCCAAGCAGGCAGGTCTGGCTGAAAATACCAGACCGCCGTAAAGGCAAAAAAAGCGACCCCATGGGTCG
CTTTTTTTATGCTGGCCTTG

Product: outer membrane porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Porin Signal Peptide Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKKTLISASVASVMALASFGALAEGPQFYGRLDLSVTNTDVGTTVQSGTKGINTNDFANENNSGTYIENNFSWLGVKGTE
NISSGIDIVYQMEFQVENTSGSGDTFKPRNTYLGIKTSAGTVLVGRNDTVFKQSEGGVDLFGNTNADIDRLVAAQTRSAD
GIWYYSPVIADLVTLNATYLMEDNNGSDDAQYALSVTVGDKGLKKHNFYLAGAYNKGISNVDAYRAVAQVKLGDFKVGGL
FQNTEKVDSGNDNNTYFVNVAYNLNGVNLKAEYGYDESGMGKYYGNVVKYTEVVDGKVVNKTLSGSDIEVTNITLGADYR
AAKSTLLFAHYAMYEGSHVTAGQRVDLQDDNVFTVGVRYDF

Sequences:

>Translated_361_residues
MKKTLISASVASVMALASFGALAEGPQFYGRLDLSVTNTDVGTTVQSGTKGINTNDFANENNSGTYIENNFSWLGVKGTE
NISSGIDIVYQMEFQVENTSGSGDTFKPRNTYLGIKTSAGTVLVGRNDTVFKQSEGGVDLFGNTNADIDRLVAAQTRSAD
GIWYYSPVIADLVTLNATYLMEDNNGSDDAQYALSVTVGDKGLKKHNFYLAGAYNKGISNVDAYRAVAQVKLGDFKVGGL
FQNTEKVDSGNDNNTYFVNVAYNLNGVNLKAEYGYDESGMGKYYGNVVKYTEVVDGKVVNKTLSGSDIEVTNITLGADYR
AAKSTLLFAHYAMYEGSHVTAGQRVDLQDDNVFTVGVRYDF
>Mature_361_residues
MKKTLISASVASVMALASFGALAEGPQFYGRLDLSVTNTDVGTTVQSGTKGINTNDFANENNSGTYIENNFSWLGVKGTE
NISSGIDIVYQMEFQVENTSGSGDTFKPRNTYLGIKTSAGTVLVGRNDTVFKQSEGGVDLFGNTNADIDRLVAAQTRSAD
GIWYYSPVIADLVTLNATYLMEDNNGSDDAQYALSVTVGDKGLKKHNFYLAGAYNKGISNVDAYRAVAQVKLGDFKVGGL
FQNTEKVDSGNDNNTYFVNVAYNLNGVNLKAEYGYDESGMGKYYGNVVKYTEVVDGKVVNKTLSGSDIEVTNITLGADYR
AAKSTLLFAHYAMYEGSHVTAGQRVDLQDDNVFTVGVRYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38986; Mature: 38986

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLISASVASVMALASFGALAEGPQFYGRLDLSVTNTDVGTTVQSGTKGINTNDFANE
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCC
NNSGTYIENNFSWLGVKGTENISSGIDIVYQMEFQVENTSGSGDTFKPRNTYLGIKTSAG
CCCCCEEECCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCC
TVLVGRNDTVFKQSEGGVDLFGNTNADIDRLVAAQTRSADGIWYYSPVIADLVTLNATYL
EEEECCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHCCEEEE
MEDNNGSDDAQYALSVTVGDKGLKKHNFYLAGAYNKGISNVDAYRAVAQVKLGDFKVGGL
EECCCCCCCCEEEEEEEECCCCCEECCEEEEEECCCCCCCHHHHHHEEEEEECCEEECCE
FQNTEKVDSGNDNNTYFVNVAYNLNGVNLKAEYGYDESGMGKYYGNVVKYTEVVDGKVVN
ECCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCHHHCCEEEEEEECCCEEEE
KTLSGSDIEVTNITLGADYRAAKSTLLFAHYAMYEGSHVTAGQRVDLQDDNVFTVGVRYD
EECCCCCEEEEEEEECCCCHHHHHEEEEEEEEEECCCEECCCCEEECCCCCEEEEEEEEC
F
C
>Mature Secondary Structure
MKKTLISASVASVMALASFGALAEGPQFYGRLDLSVTNTDVGTTVQSGTKGINTNDFANE
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCC
NNSGTYIENNFSWLGVKGTENISSGIDIVYQMEFQVENTSGSGDTFKPRNTYLGIKTSAG
CCCCCEEECCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCC
TVLVGRNDTVFKQSEGGVDLFGNTNADIDRLVAAQTRSADGIWYYSPVIADLVTLNATYL
EEEECCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHCCEEEE
MEDNNGSDDAQYALSVTVGDKGLKKHNFYLAGAYNKGISNVDAYRAVAQVKLGDFKVGGL
EECCCCCCCCEEEEEEEECCCCCEECCEEEEEECCCCCCCHHHHHHEEEEEECCEEECCE
FQNTEKVDSGNDNNTYFVNVAYNLNGVNLKAEYGYDESGMGKYYGNVVKYTEVVDGKVVN
ECCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCHHHCCEEEEEEECCCEEEE
KTLSGSDIEVTNITLGADYRAAKSTLLFAHYAMYEGSHVTAGQRVDLQDDNVFTVGVRYD
EECCCCCEEEEEEEECCCCHHHHHEEEEEEEEEECCCEECCCCEEECCCCCEEEEEEEEC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA