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The map label for this gene is 119773685

Identifier: 119773685

GI number: 119773685

Start: 670954

End: 672021

Strand: Reverse

Name: 119773685

Synonym: Sama_0545

Alternate gene names: NA

Gene position: 672021-670954 (Counterclockwise)

Preceding gene: 119773687

Following gene: 119773684

Centisome position: 15.61

GC content: 51.87

Gene sequence:

>1068_bases
ATGAAAAAATCCCTGATCGCATCGGCCGTTGCCACGGGTGCCGCCCTGTCTTCATTCGCCACCCTGGCTGATGGCCCTGC
GTTTTATGGCCGTGTTGACCTGGCAGCCACCAATTCCAATACAGGTTACGCCACCCAAAACCAAAAAGACGGCACTGTAT
TTGAAAACAATTTCTCCTGGCTCGGCGTCAAAGGCAGTGAAAAGCTGAGCCAAAACGTCGCCCTGATTTATCAAATGGAG
TTTGGCGTAAATAACTTCGATAACTCAGGCGACACTTTTAATACCCGTAACACCTTCGTGGGCCTGCAAACTCAGGCGGG
TACCGCGTTAATTGGCCGTAACGACAGCGTATTCAAACAGTCAGAGGGAGGCTTCGACCTGTTTGGCAACACCAATGCGG
ATATCGATCTGCTGGTGGCAGGGCAGAGCCGTCTTGGTGACAGCATCACCTACTACTCCCCCAAAATCGCTCATATTCTC
ACTCTGAACGCCACCTACGTCATGGAAGATAACTATGAAGAAGGTAGCTGGTTCAACCCCGGTGAAGACGATGAGTGGAG
CGGTAACACCTATGCCCTGTCGGCCACCCTGGGTGACAAGGCCCTGAAGGCCCAAAACTACTATGTTGCTGCTGCATACA
ATGATGGCCTGGATGGCATTAAAGCCTACCGCGGCGTGGCACAGGTTAAATTCGGGGAGTTGGTACTGGGCGCGCTCTAC
CAAAACTCGGAGCATGTGGCAGATAAGTACAGCAATCTGGAAGGTGACACCTGGTTTATCAACGCCGGTTACAAGCTGGG
TAACACCACCCTGAAGGCCAGCTACGGCCAGGACGATTCAGGTTTGGGTAAGTATGTCGGTCGCATGGTGGGAGATTCTG
ACGTTGGCATGGAACAGGTCGAAAACGTCGATTTGCAGCAATACACCCTGGGTGCCGATCATCGTCTAAGCAAAAATACT
TTGGTTTATGGTCATTTCACCCGATTTGACGGGGATATGTTACTTGGTGGTAACAAGGTCTCCCTGGAAGACGACGTGAT
CACCCTGGGGTTGCGGGTAGACTTCTAA

Upstream 100 bases:

>100_bases
GATCACACTTTGCCTTTTGACGGACTGCCACACTGCTGCCGCATTCAAGTAAGGGGCAATAACCCAACGCCCCTGTCCCG
TCAATAGTGAGGAATCCGCT

Downstream 100 bases:

>100_bases
GCATCTGATAAAAATACCTATACAAAGCGGCCTGCAGGCCGCTTTTTAATGCAAAAAATTTGATACTTTTATTGCAGTTA
TATGCACTACTGCTAAAGTT

Product: outer membrane porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Outer Membrane Porin Protein; Porin Signal Peptide Protein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSWLGVKGSEKLSQNVALIYQME
FGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQSEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHIL
TLNATYVMEDNYEEGSWFNPGEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALY
QNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGMEQVENVDLQQYTLGADHRLSKNT
LVYGHFTRFDGDMLLGGNKVSLEDDVITLGLRVDF

Sequences:

>Translated_355_residues
MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSWLGVKGSEKLSQNVALIYQME
FGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQSEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHIL
TLNATYVMEDNYEEGSWFNPGEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALY
QNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGMEQVENVDLQQYTLGADHRLSKNT
LVYGHFTRFDGDMLLGGNKVSLEDDVITLGLRVDF
>Mature_355_residues
MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSWLGVKGSEKLSQNVALIYQME
FGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQSEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHIL
TLNATYVMEDNYEEGSWFNPGEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALY
QNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGMEQVENVDLQQYTLGADHRLSKNT
LVYGHFTRFDGDMLLGGNKVSLEDDVITLGLRVDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38456; Mature: 38456

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSW
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEECCCEE
LGVKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQ
EEECCCHHHCCCEEEEEEEECCCCCCCCCCCCEECCCEEEEEEECCCEEEEECCCCCEEE
SEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYVMEDNYEEGSWFNP
CCCCEEEECCCCCCEEEEEECCHHCCCCEEEECCCEEEEEEEEEEEEEECCCCCCCCCCC
GEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALY
CCCCCCCCCEEEEEEECCCCCEECCCEEEEEEECCCCHHHHHHCCHHEEEHHHHHEEHHH
QNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGMEQV
CCCHHHHHHHCCCCCCEEEEECCEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHH
ENVDLQQYTLGADHRLSKNTLVYGHFTRFDGDMLLGGNKVSLEDDVITLGLRVDF
HCCCCEEEECCCCCCCCCCEEEEEEEEEECCCEEECCCEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKKSLIASAVATGAALSSFATLADGPAFYGRVDLAATNSNTGYATQNQKDGTVFENNFSW
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEECCCEE
LGVKGSEKLSQNVALIYQMEFGVNNFDNSGDTFNTRNTFVGLQTQAGTALIGRNDSVFKQ
EEECCCHHHCCCEEEEEEEECCCCCCCCCCCCEECCCEEEEEEECCCEEEEECCCCCEEE
SEGGFDLFGNTNADIDLLVAGQSRLGDSITYYSPKIAHILTLNATYVMEDNYEEGSWFNP
CCCCEEEECCCCCCEEEEEECCHHCCCCEEEECCCEEEEEEEEEEEEEECCCCCCCCCCC
GEDDEWSGNTYALSATLGDKALKAQNYYVAAAYNDGLDGIKAYRGVAQVKFGELVLGALY
CCCCCCCCCEEEEEEECCCCCEECCCEEEEEEECCCCHHHHHHCCHHEEEHHHHHEEHHH
QNSEHVADKYSNLEGDTWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGMEQV
CCCHHHHHHHCCCCCCEEEEECCEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHH
ENVDLQQYTLGADHRLSKNTLVYGHFTRFDGDMLLGGNKVSLEDDVITLGLRVDF
HCCCCEEEECCCCCCCCCCEEEEEEEEEECCCEEECCCEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA