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The map label for this gene is gbh [H]

Identifier: 119717448

GI number: 119717448

Start: 3424882

End: 3425883

Strand: Reverse

Name: gbh [H]

Synonym: Noca_3224

Alternate gene names: 119717448

Gene position: 3425883-3424882 (Counterclockwise)

Preceding gene: 119717450

Following gene: 119717447

Centisome position: 68.71

GC content: 73.35

Gene sequence:

>1002_bases
ATGACCCGGTACGGCGCCCAGTTCGGTCCCGACATCACCTTCCTCGGGGTCGACCCGATCGACCTCGACGACGCCGACGG
GCTGGCCGCCGCCGACGTGGTCGTCCTCGGTGCGCCGTTCGACGGCGGCACCTCGCACCGGCCCGGCACCCGGTTCGGGC
CCAGCGCGATCCGGCAGACCGACTACCTGCCCCAGGACGGATCGCGGCCGCACCTCGCGCTGCGGGTCGACGCCCTGCGC
GACCTGCGGGTGGTCGATGCGGGCGACGTCGAGATGCCGCCCGGAGACATCACCCGGGCCCTCGGCAACCTCGAGGAGGC
CGTCTACGCCGTCGCTCGCTCCGGTGCCGTCCCGCTGGTCCTCGGCGGCGACCACTCGATCGCGCTCCCCGATGCGACCG
GGGTGGCCCGCCACCTCGGCTTCGGCCGGGTCTCGATGATCCACTTCGACGCGCACGCCGACACCGGCCACATCGAGTTC
GGGTCGCTCTATCGCCACGGCCAGCCGATGCGCCGGCTGATCGAGTCGGGCGCGCTGCGCGGGGACCGGTTCCTCCAGAT
GGGGCTGCGCGGCTACTGGCCCGGCCCCGAGACGCTCGACTGGATGGCGGCGCAGCACATGCGCTCCTACGAGATGACCG
AGATCGGCCGGCGCGGCCTCGAGGAGTGCCTGGACGAGGCCTTCGAGATCGCCCTCGACGAGTGCGATGCGGTCTTCCTC
TCCGTCGACATCGACGTGTGCGACCCCGGCCACGCACCCGGCACCGGCACGCCGGAGCCCGGTGGGCTCTCCAGCCGCCA
GCTCCTGGACGCGGTCCGCCGGATCTGTCGCGAGCTCCCGGTCGCCGGCATCGACGTGGTCGAGGTGTCCCCGCCGTACG
ACCACGCCGAGATCACCGCGTACCTCGCCAACCGGGTCTGCCTCGAGGCCCTCTCCGGCCTGGCGGCCCGCCGCCACGGC
ATCTCGCACGATCCGGCCGGCCCGCTGCTGGAAGGTCGCTGA

Upstream 100 bases:

>100_bases
TGATGCTCTGTGGAACCGTGATCTGGCAAGTGAATCAGTTGTGTGCGGCCTTGATCGACGCGGAATCCGAAGGGTAGTGC
CGCCGTGGTAGGAACTTCCC

Downstream 100 bases:

>100_bases
GTGCGCACGATCTTCCGCGCTGCGGGTGCCTTCGACGGGCACCGGCACGTCGGGCGGACGGACGTGCTGGTCGCAGACGG
GCGGATCGTCGACGTCCGTG

Product: agmatinase

Products: NA

Alternate protein names: GBase; D-arginase [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTRYGAQFGPDITFLGVDPIDLDDADGLAAADVVVLGAPFDGGTSHRPGTRFGPSAIRQTDYLPQDGSRPHLALRVDALR
DLRVVDAGDVEMPPGDITRALGNLEEAVYAVARSGAVPLVLGGDHSIALPDATGVARHLGFGRVSMIHFDAHADTGHIEF
GSLYRHGQPMRRLIESGALRGDRFLQMGLRGYWPGPETLDWMAAQHMRSYEMTEIGRRGLEECLDEAFEIALDECDAVFL
SVDIDVCDPGHAPGTGTPEPGGLSSRQLLDAVRRICRELPVAGIDVVEVSPPYDHAEITAYLANRVCLEALSGLAARRHG
ISHDPAGPLLEGR

Sequences:

>Translated_333_residues
MTRYGAQFGPDITFLGVDPIDLDDADGLAAADVVVLGAPFDGGTSHRPGTRFGPSAIRQTDYLPQDGSRPHLALRVDALR
DLRVVDAGDVEMPPGDITRALGNLEEAVYAVARSGAVPLVLGGDHSIALPDATGVARHLGFGRVSMIHFDAHADTGHIEF
GSLYRHGQPMRRLIESGALRGDRFLQMGLRGYWPGPETLDWMAAQHMRSYEMTEIGRRGLEECLDEAFEIALDECDAVFL
SVDIDVCDPGHAPGTGTPEPGGLSSRQLLDAVRRICRELPVAGIDVVEVSPPYDHAEITAYLANRVCLEALSGLAARRHG
ISHDPAGPLLEGR
>Mature_332_residues
TRYGAQFGPDITFLGVDPIDLDDADGLAAADVVVLGAPFDGGTSHRPGTRFGPSAIRQTDYLPQDGSRPHLALRVDALRD
LRVVDAGDVEMPPGDITRALGNLEEAVYAVARSGAVPLVLGGDHSIALPDATGVARHLGFGRVSMIHFDAHADTGHIEFG
SLYRHGQPMRRLIESGALRGDRFLQMGLRGYWPGPETLDWMAAQHMRSYEMTEIGRRGLEECLDEAFEIALDECDAVFLS
VDIDVCDPGHAPGTGTPEPGGLSSRQLLDAVRRICRELPVAGIDVVEVSPPYDHAEITAYLANRVCLEALSGLAARRHGI
SHDPAGPLLEGR

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=288, Percent_Identity=35.4166666666667, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI10947139, Length=316, Percent_Identity=27.8481012658228, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4502215, Length=298, Percent_Identity=28.5234899328859, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI1789306, Length=289, Percent_Identity=34.6020761245675, Blast_Score=135, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI71996843, Length=225, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6325146, Length=218, Percent_Identity=28.8990825688073, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24638886, Length=284, Percent_Identity=26.4084507042254, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.7; =3.5.3.10 [H]

Molecular weight: Translated: 35768; Mature: 35637

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYGAQFGPDITFLGVDPIDLDDADGLAAADVVVLGAPFDGGTSHRPGTRFGPSAIRQT
CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHC
DYLPQDGSRPHLALRVDALRDLRVVDAGDVEMPPGDITRALGNLEEAVYAVARSGAVPLV
CCCCCCCCCCEEEEEECCHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
LGGDHSIALPDATGVARHLGFGRVSMIHFDAHADTGHIEFGSLYRHGQPMRRLIESGALR
ECCCCCEECCCHHHHHHHCCCCEEEEEEEECCCCCCCEEHHHHHHCCHHHHHHHHHCCCC
GDRFLQMGLRGYWPGPETLDWMAAQHMRSYEMTEIGRRGLEECLDEAFEIALDECDAVFL
CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SVDIDVCDPGHAPGTGTPEPGGLSSRQLLDAVRRICRELPVAGIDVVEVSPPYDHAEITA
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
YLANRVCLEALSGLAARRHGISHDPAGPLLEGR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRYGAQFGPDITFLGVDPIDLDDADGLAAADVVVLGAPFDGGTSHRPGTRFGPSAIRQT
CCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHC
DYLPQDGSRPHLALRVDALRDLRVVDAGDVEMPPGDITRALGNLEEAVYAVARSGAVPLV
CCCCCCCCCCEEEEEECCHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
LGGDHSIALPDATGVARHLGFGRVSMIHFDAHADTGHIEFGSLYRHGQPMRRLIESGALR
ECCCCCEECCCHHHHHHHCCCCEEEEEEEECCCCCCCEEHHHHHHCCHHHHHHHHHCCCC
GDRFLQMGLRGYWPGPETLDWMAAQHMRSYEMTEIGRRGLEECLDEAFEIALDECDAVFL
CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SVDIDVCDPGHAPGTGTPEPGGLSSRQLLDAVRRICRELPVAGIDVVEVSPPYDHAEITA
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
YLANRVCLEALSGLAARRHGISHDPAGPLLEGR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA