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The map label for this gene is ytcJ [H]

Identifier: 119717447

GI number: 119717447

Start: 3423265

End: 3424881

Strand: Reverse

Name: ytcJ [H]

Synonym: Noca_3223

Alternate gene names: 119717447

Gene position: 3424881-3423265 (Counterclockwise)

Preceding gene: 119717448

Following gene: 119717446

Centisome position: 68.69

GC content: 74.4

Gene sequence:

>1617_bases
GTGCGCACGATCTTCCGCGCTGCGGGTGCCTTCGACGGGCACCGGCACGTCGGGCGGACGGACGTGCTGGTCGCAGACGG
GCGGATCGTCGACGTCCGTGAAGGCGGTTTCGAGGCTCGCGTCGCTCGGGCCTCGACCACCGTGGTCGACGTCGCGTTCC
TCGCGCCCGGCTTCGTCGACGCGCATGTGCACCCCGTCCAGGGCGGGTTGGAACGGCTGCGCTGCGACCTGTCCGAGCTC
TCGACCCCGGAGGAGTACCTCACGGCGATCGCGTCGTACGCCGCGGAGCATCCCGCGGCCGAGTGGATCCTCGGTGGCGG
CTGGGCGATGCCCGCGTTCCCGGGCGGCACCCCGACGGCGGCCGACCTCGACCGCGTGGTGCCGGACCGGCCGGTGTTCT
TGCCCAACCGCGACCACCACGGCGCGTGGGTCAACACCCGCGCCCTCGAGATCGCCGGGGTGGACGCGCGCACACCGGAC
CCACCCGACGGGCGGATCGAGCGAGGCCCGGACGGCCGGCCCAACGGCACCCTCCACGAGGGCGCGACCGCGCTGGTCGC
CCGCCATCTGCCGCCGGTGAGCGAGGCCGACTACTACGCCGCGCTGCTGGCGGGCCAGGCCTACCTCCACTCGGTCGGGG
TCACCTCCTGGCAGGACGCGATCGTCGGCGCCTACTCGGGCATGGACGACGTCGCCTCGACGTACACGACCGCCGCCGCG
GACGGCGACCTGCGCTCGCACGTCGTCGGCGCGTTGTGGTGGGAGCGCAGCCGGGGCGTCGAGCAGGTCGCCGACCTCGT
CGCGCGGCGGGAGGCGATGAGCGGTGGCCGGTTCCGGGCGGCCACGGTCAAGATCATGCAGGACGGTGTGGCGGAGAACG
GCACGGCCGCGATGCTGGCGCCCTACCTCGACCGCTGCGGCCACCCCACCGGCAACGCCGGCCACTCCTTCGTCGACCCG
GACGGGCTCCGGGCGGCCGTCGCCGCGCTGGACGCCGCAGACTTCCAGGTGCACGTGCACGCGATCGGCGATCGCGGCGT
GCGGGAGGCGCTCGACGCGTTCGAGGGCACCGATCCGGCACATCGCCACCAGATCGCGCACGTCCAAGTCGTGCACCCCG
ACGACGTACGCCGCTTCGCCACGCTCGGTGTGGCCGCGAACCTACAGATGCTCTGGGCCTGCCTCGACGACCAGATGGTC
GACCTGACCCTGCCCGTCCTCGGCCCCGAGCGGGCCACCCGGCAGTACCCGTTCGGCGACCTGCACCGTGCGGGGACCAT
GCTGGTGGCTGGGAGCGACTGGCCGGTGAGCACCCCCGACCCGCTGCCGGCGGTCCAGGTCGCGGTGACGCGCGTCGAGC
CCGGCAGCGAGCGGGAGCCGTTCCTTCCCGGTCAGGCGCTGGCGCTCGAGACCGCGTTCGCGGCGTACACCTCGGGCAGT
GCCTGGGCCAACCACCGCGGCCCGCGGGACGAGCCGGCCGCCGGGGTCCTGCGACCGGGAGCGGTCGCCGACCTGGTGGT
CCTCGACCGGGACCCGTTCACGGGCGCGCCCGAGGAGATCGGCGCCGCGCGCGTCGTGTCGACGTGGGTCGACGGAGCAC
CTGTCCACACCGCCTGA

Upstream 100 bases:

>100_bases
CCTCGCCAACCGGGTCTGCCTCGAGGCCCTCTCCGGCCTGGCGGCCCGCCGCCACGGCATCTCGCACGATCCGGCCGGCC
CGCTGCTGGAAGGTCGCTGA

Downstream 100 bases:

>100_bases
GCCCTATTGGACGACTGATTCCGTTTTGATTTGCGGTCAAGGCCTACAGATTCCGTAGCCGGGTCACTAGGCTCCGTGCA
TGGCCGACCAGACCTTCAAG

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MRTIFRAAGAFDGHRHVGRTDVLVADGRIVDVREGGFEARVARASTTVVDVAFLAPGFVDAHVHPVQGGLERLRCDLSEL
STPEEYLTAIASYAAEHPAAEWILGGGWAMPAFPGGTPTAADLDRVVPDRPVFLPNRDHHGAWVNTRALEIAGVDARTPD
PPDGRIERGPDGRPNGTLHEGATALVARHLPPVSEADYYAALLAGQAYLHSVGVTSWQDAIVGAYSGMDDVASTYTTAAA
DGDLRSHVVGALWWERSRGVEQVADLVARREAMSGGRFRAATVKIMQDGVAENGTAAMLAPYLDRCGHPTGNAGHSFVDP
DGLRAAVAALDAADFQVHVHAIGDRGVREALDAFEGTDPAHRHQIAHVQVVHPDDVRRFATLGVAANLQMLWACLDDQMV
DLTLPVLGPERATRQYPFGDLHRAGTMLVAGSDWPVSTPDPLPAVQVAVTRVEPGSEREPFLPGQALALETAFAAYTSGS
AWANHRGPRDEPAAGVLRPGAVADLVVLDRDPFTGAPEEIGAARVVSTWVDGAPVHTA

Sequences:

>Translated_538_residues
MRTIFRAAGAFDGHRHVGRTDVLVADGRIVDVREGGFEARVARASTTVVDVAFLAPGFVDAHVHPVQGGLERLRCDLSEL
STPEEYLTAIASYAAEHPAAEWILGGGWAMPAFPGGTPTAADLDRVVPDRPVFLPNRDHHGAWVNTRALEIAGVDARTPD
PPDGRIERGPDGRPNGTLHEGATALVARHLPPVSEADYYAALLAGQAYLHSVGVTSWQDAIVGAYSGMDDVASTYTTAAA
DGDLRSHVVGALWWERSRGVEQVADLVARREAMSGGRFRAATVKIMQDGVAENGTAAMLAPYLDRCGHPTGNAGHSFVDP
DGLRAAVAALDAADFQVHVHAIGDRGVREALDAFEGTDPAHRHQIAHVQVVHPDDVRRFATLGVAANLQMLWACLDDQMV
DLTLPVLGPERATRQYPFGDLHRAGTMLVAGSDWPVSTPDPLPAVQVAVTRVEPGSEREPFLPGQALALETAFAAYTSGS
AWANHRGPRDEPAAGVLRPGAVADLVVLDRDPFTGAPEEIGAARVVSTWVDGAPVHTA
>Mature_538_residues
MRTIFRAAGAFDGHRHVGRTDVLVADGRIVDVREGGFEARVARASTTVVDVAFLAPGFVDAHVHPVQGGLERLRCDLSEL
STPEEYLTAIASYAAEHPAAEWILGGGWAMPAFPGGTPTAADLDRVVPDRPVFLPNRDHHGAWVNTRALEIAGVDARTPD
PPDGRIERGPDGRPNGTLHEGATALVARHLPPVSEADYYAALLAGQAYLHSVGVTSWQDAIVGAYSGMDDVASTYTTAAA
DGDLRSHVVGALWWERSRGVEQVADLVARREAMSGGRFRAATVKIMQDGVAENGTAAMLAPYLDRCGHPTGNAGHSFVDP
DGLRAAVAALDAADFQVHVHAIGDRGVREALDAFEGTDPAHRHQIAHVQVVHPDDVRRFATLGVAANLQMLWACLDDQMV
DLTLPVLGPERATRQYPFGDLHRAGTMLVAGSDWPVSTPDPLPAVQVAVTRVEPGSEREPFLPGQALALETAFAAYTSGS
AWANHRGPRDEPAAGVLRPGAVADLVVLDRDPFTGAPEEIGAARVVSTWVDGAPVHTA

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 57084; Mature: 57084

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIFRAAGAFDGHRHVGRTDVLVADGRIVDVREGGFEARVARASTTVVDVAFLAPGFVD
CCCHHHHCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEHHHHHEEEHHHHCCCCCC
AHVHPVQGGLERLRCDLSELSTPEEYLTAIASYAAEHPAAEWILGGGWAMPAFPGGTPTA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHEEEECCEECCCCCCCCCCH
ADLDRVVPDRPVFLPNRDHHGAWVNTRALEIAGVDARTPDPPDGRIERGPDGRPNGTLHE
HHHHHHCCCCCEECCCCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
GATALVARHLPPVSEADYYAALLAGQAYLHSVGVTSWQDAIVGAYSGMDDVASTYTTAAA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
DGDLRSHVVGALWWERSRGVEQVADLVARREAMSGGRFRAATVKIMQDGVAENGTAAMLA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCHHHHH
PYLDRCGHPTGNAGHSFVDPDGLRAAVAALDAADFQVHVHAIGDRGVREALDAFEGTDPA
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCHH
HRHQIAHVQVVHPDDVRRFATLGVAANLQMLWACLDDQMVDLTLPVLGPERATRQYPFGD
HHCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCH
LHRAGTMLVAGSDWPVSTPDPLPAVQVAVTRVEPGSEREPFLPGQALALETAFAAYTSGS
HHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC
AWANHRGPRDEPAAGVLRPGAVADLVVLDRDPFTGAPEEIGAARVVSTWVDGAPVHTA
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRTIFRAAGAFDGHRHVGRTDVLVADGRIVDVREGGFEARVARASTTVVDVAFLAPGFVD
CCCHHHHCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEHHHHHEEEHHHHCCCCCC
AHVHPVQGGLERLRCDLSELSTPEEYLTAIASYAAEHPAAEWILGGGWAMPAFPGGTPTA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHEEEECCEECCCCCCCCCCH
ADLDRVVPDRPVFLPNRDHHGAWVNTRALEIAGVDARTPDPPDGRIERGPDGRPNGTLHE
HHHHHHCCCCCEECCCCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
GATALVARHLPPVSEADYYAALLAGQAYLHSVGVTSWQDAIVGAYSGMDDVASTYTTAAA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
DGDLRSHVVGALWWERSRGVEQVADLVARREAMSGGRFRAATVKIMQDGVAENGTAAMLA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCHHHHH
PYLDRCGHPTGNAGHSFVDPDGLRAAVAALDAADFQVHVHAIGDRGVREALDAFEGTDPA
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCHH
HRHQIAHVQVVHPDDVRRFATLGVAANLQMLWACLDDQMVDLTLPVLGPERATRQYPFGD
HHCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCH
LHRAGTMLVAGSDWPVSTPDPLPAVQVAVTRVEPGSEREPFLPGQALALETAFAAYTSGS
HHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC
AWANHRGPRDEPAAGVLRPGAVADLVVLDRDPFTGAPEEIGAARVVSTWVDGAPVHTA
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]