Click here to switch to the map view.

The map label for this gene is 119717430

Identifier: 119717430

GI number: 119717430

Start: 3406345

End: 3407337

Strand: Reverse

Name: 119717430

Synonym: Noca_3206

Alternate gene names: NA

Gene position: 3407337-3406345 (Counterclockwise)

Preceding gene: 119717431

Following gene: 119717428

Centisome position: 68.34

GC content: 72.51

Gene sequence:

>993_bases
GTGATCCCGAGGCTCCTCGTCGCGCTCGTCCTGGCCGGTCTCGCTCTCGGCGGCCGCACCGGCCCCGCGTCGAGCGGGCC
CCAGGACCGCACCCCGCCGGCGCCGGTGGTGTCGCCCGTGGTGCCCTTGCGGGGCGTGACGCTGGAGTCGGTGCGCCACC
TCGACGAGATCGAGCAGGCACTGGCCCGGCACAGTCGTCGGCCCGTTGCCCGGATCGTGTTCCAGCGCGGCGCCGGCCCG
GCGCACTACACGCGCGCCGTGCGTCGCCTGCACGACGACTCCTACCTGATGGGGGAGATCCTCGACTCCACCGCGGTGCG
CCGGACCACGGTGCGCGAGTACCGGAACCGGACGCGTGCCTTCGTCCACCGCTTCGGGAGCCGCCTGGACCTCTACGAGA
TCGGCAACGAGCTGAACGGCGAGTGGCTGGGCCGGCCGCGGTCGATCAACGCCAAGGTCGCGGCGGCCTACGACGTGGTC
AAGGGCGAGTACGCCGACCTGGGGCTGCGCTCGGTCGTCACGCTCAACTACTGGCCCAGCCGGGACTGCTACGCCCACGA
CTGGGAGGCGACGCTGCCGTTCGCGCGTCAGCTGCCGCGAAGGGTGCGGCACGGCGTGGACCTGGTGCTGCTCAGCTTCT
ACGAGACGGCGTGCTCACCACGAGCACACCCCAGCGCCGGGCAGTTCGCCTCGACGCTGCGCTCGCTGGGCGAGATCTTC
CCCGACGCCCAGGTCGGGATCGGGGAGCTCGGCGCCCAAGGACGTGCCGACGGACTGCCCCGCGACCCGACCTCGGCGGA
GAAGGAGCGGATCGCCCGTCGCTACATCGGGATGCACGACCGGTTGGCGGACGCGGTCGGCCCGAGGTTCGTCGGCGGGT
ACTTCTGGTGGTACTACGCGACCGACGCCGTCCCGTGGGACCGCGCCGACTCGTTGTGGCCGACCCTCGAGGACCTCTAC
GCCACCCTCGGTCAGCCGCGTGCCGGTCCGTGA

Upstream 100 bases:

>100_bases
TGAGCCTCGGCGGAGGCTGATTCGGCGCGGCGGCGTGCCGGACCGACTCCGCGAGCCCTAGTTGACGCGGGTCGAGAGGT
CGGGCGGGCAGGATGCTGTC

Downstream 100 bases:

>100_bases
TGCTCGGGCATCACGCGGTGGCGGCGAACGCCTCCCCGACCACGTCGAAGCCCTCGTCGAGCAGCGCGTCGCTGATCGAG
AGCGGCGGCAGGAACCGGAA

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MIPRLLVALVLAGLALGGRTGPASSGPQDRTPPAPVVSPVVPLRGVTLESVRHLDEIEQALARHSRRPVARIVFQRGAGP
AHYTRAVRRLHDDSYLMGEILDSTAVRRTTVREYRNRTRAFVHRFGSRLDLYEIGNELNGEWLGRPRSINAKVAAAYDVV
KGEYADLGLRSVVTLNYWPSRDCYAHDWEATLPFARQLPRRVRHGVDLVLLSFYETACSPRAHPSAGQFASTLRSLGEIF
PDAQVGIGELGAQGRADGLPRDPTSAEKERIARRYIGMHDRLADAVGPRFVGGYFWWYYATDAVPWDRADSLWPTLEDLY
ATLGQPRAGP

Sequences:

>Translated_330_residues
MIPRLLVALVLAGLALGGRTGPASSGPQDRTPPAPVVSPVVPLRGVTLESVRHLDEIEQALARHSRRPVARIVFQRGAGP
AHYTRAVRRLHDDSYLMGEILDSTAVRRTTVREYRNRTRAFVHRFGSRLDLYEIGNELNGEWLGRPRSINAKVAAAYDVV
KGEYADLGLRSVVTLNYWPSRDCYAHDWEATLPFARQLPRRVRHGVDLVLLSFYETACSPRAHPSAGQFASTLRSLGEIF
PDAQVGIGELGAQGRADGLPRDPTSAEKERIARRYIGMHDRLADAVGPRFVGGYFWWYYATDAVPWDRADSLWPTLEDLY
ATLGQPRAGP
>Mature_330_residues
MIPRLLVALVLAGLALGGRTGPASSGPQDRTPPAPVVSPVVPLRGVTLESVRHLDEIEQALARHSRRPVARIVFQRGAGP
AHYTRAVRRLHDDSYLMGEILDSTAVRRTTVREYRNRTRAFVHRFGSRLDLYEIGNELNGEWLGRPRSINAKVAAAYDVV
KGEYADLGLRSVVTLNYWPSRDCYAHDWEATLPFARQLPRRVRHGVDLVLLSFYETACSPRAHPSAGQFASTLRSLGEIF
PDAQVGIGELGAQGRADGLPRDPTSAEKERIARRYIGMHDRLADAVGPRFVGGYFWWYYATDAVPWDRADSLWPTLEDLY
ATLGQPRAGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36717; Mature: 36717

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRLLVALVLAGLALGGRTGPASSGPQDRTPPAPVVSPVVPLRGVTLESVRHLDEIEQA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LARHSRRPVARIVFQRGAGPAHYTRAVRRLHDDSYLMGEILDSTAVRRTTVREYRNRTRA
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVHRFGSRLDLYEIGNELNGEWLGRPRSINAKVAAAYDVVKGEYADLGLRSVVTLNYWPS
HHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCHHHEEEEECCCC
RDCYAHDWEATLPFARQLPRRVRHGVDLVLLSFYETACSPRAHPSAGQFASTLRSLGEIF
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
PDAQVGIGELGAQGRADGLPRDPTSAEKERIARRYIGMHDRLADAVGPRFVGGYFWWYYA
CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHEEEEEEE
TDAVPWDRADSLWPTLEDLYATLGQPRAGP
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIPRLLVALVLAGLALGGRTGPASSGPQDRTPPAPVVSPVVPLRGVTLESVRHLDEIEQA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LARHSRRPVARIVFQRGAGPAHYTRAVRRLHDDSYLMGEILDSTAVRRTTVREYRNRTRA
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVHRFGSRLDLYEIGNELNGEWLGRPRSINAKVAAAYDVVKGEYADLGLRSVVTLNYWPS
HHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCHHHEEEEECCCC
RDCYAHDWEATLPFARQLPRRVRHGVDLVLLSFYETACSPRAHPSAGQFASTLRSLGEIF
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
PDAQVGIGELGAQGRADGLPRDPTSAEKERIARRYIGMHDRLADAVGPRFVGGYFWWYYA
CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHEEEEEEE
TDAVPWDRADSLWPTLEDLYATLGQPRAGP
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA