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The map label for this gene is ycaC [H]

Identifier: 119717431

GI number: 119717431

Start: 3407435

End: 3408187

Strand: Reverse

Name: ycaC [H]

Synonym: Noca_3207

Alternate gene names: 119717431

Gene position: 3408187-3407435 (Counterclockwise)

Preceding gene: 119717433

Following gene: 119717430

Centisome position: 68.36

GC content: 66.27

Gene sequence:

>753_bases
ATGACCGATCGTCCTGCTGACGTCATCTCTGCGATCACCGACGAGGCCTTGCCTGACAAGGTCTCGCTTGCCGATGCCCG
CGCCGCGGGTCGCTTCGGACACGACAAGCCGACGGTCGAGAACTCCGTGGTGCTGCTGATCGACCACCAGATCGGCCTGC
TCGCGAGCACCCGCGACACCTCGAGCGCCGCGGAGCTCAAGAGCAACATCGTCGGCCTCGCGAGGGTCGCGAAGGCCCTC
GAGCTGCCCACCCTGATCACGTCGTCGAATGCGCACTGGCAGAACGGCGACGTGCTGCCGGAGATCAAGGAGCTCTTCCC
CGAGACCCCCATCATCCGTCGGACCGGCATCATCAACGCCTACGAGGACCCGACCTTCCGGGCCGCCTTCGACAAGATCG
TCGAGGAGACCGGCCGCGACCACGTCATCCTGGCCGGGGTCACGATCGGCACCTGCACCCTGTTCCCGACCCTCTCGCTG
CAGAACGACGGGTATGTGGTCTACCCGGTGATCGACGCCGCAGGCGCCTGGAACCGCTACGAGGCCGACGCCGCGATCGC
CCGGATGGTGCAGGCCGGCGCGCAGCCCGTCTCCACCTTCGCGCTCGCCTGCGAGCTCCAGGCGGACTGGAAGAAGCCGT
GGGCGAACGCCATGCTCGAGCCGTTCAACCAGAACTTGTCCGAGTACGGCTACGTGCTGCAGAACTTCTGGAACAACTAC
GGCAACAAGGTGGTGGCCGACCCGTTCGCCTGA

Upstream 100 bases:

>100_bases
GGCCAGCCGTTCGCTGTCGCCGCCTGCTCTCGCTCAACCGGCGTGGATGGCGGGAACGGAGTGTCTGGAGCGATGGGACC
TTCTTCGAGAGTGAGCGATC

Downstream 100 bases:

>100_bases
GCCTCGGCGGAGGCTGATTCGGCGCGGCGGCGTGCCGGACCGACTCCGCGAGCCCTAGTTGACGCGGGTCGAGAGGTCGG
GCGGGCAGGATGCTGTCGTG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTDRPADVISAITDEALPDKVSLADARAAGRFGHDKPTVENSVVLLIDHQIGLLASTRDTSSAAELKSNIVGLARVAKAL
ELPTLITSSNAHWQNGDVLPEIKELFPETPIIRRTGIINAYEDPTFRAAFDKIVEETGRDHVILAGVTIGTCTLFPTLSL
QNDGYVVYPVIDAAGAWNRYEADAAIARMVQAGAQPVSTFALACELQADWKKPWANAMLEPFNQNLSEYGYVLQNFWNNY
GNKVVADPFA

Sequences:

>Translated_250_residues
MTDRPADVISAITDEALPDKVSLADARAAGRFGHDKPTVENSVVLLIDHQIGLLASTRDTSSAAELKSNIVGLARVAKAL
ELPTLITSSNAHWQNGDVLPEIKELFPETPIIRRTGIINAYEDPTFRAAFDKIVEETGRDHVILAGVTIGTCTLFPTLSL
QNDGYVVYPVIDAAGAWNRYEADAAIARMVQAGAQPVSTFALACELQADWKKPWANAMLEPFNQNLSEYGYVLQNFWNNY
GNKVVADPFA
>Mature_249_residues
TDRPADVISAITDEALPDKVSLADARAAGRFGHDKPTVENSVVLLIDHQIGLLASTRDTSSAAELKSNIVGLARVAKALE
LPTLITSSNAHWQNGDVLPEIKELFPETPIIRRTGIINAYEDPTFRAAFDKIVEETGRDHVILAGVTIGTCTLFPTLSLQ
NDGYVVYPVIDAAGAWNRYEADAAIARMVQAGAQPVSTFALACELQADWKKPWANAMLEPFNQNLSEYGYVLQNFWNNYG
NKVVADPFA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=196, Percent_Identity=37.2448979591837, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 27244; Mature: 27113

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRPADVISAITDEALPDKVSLADARAAGRFGHDKPTVENSVVLLIDHQIGLLASTRDT
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCCC
SSAAELKSNIVGLARVAKALELPTLITSSNAHWQNGDVLPEIKELFPETPIIRRTGIINA
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCC
YEDPTFRAAFDKIVEETGRDHVILAGVTIGTCTLFPTLSLQNDGYVVYPVIDAAGAWNRY
CCCCHHHHHHHHHHHHCCCCEEEEEECEEEHEEEEEEEEECCCCEEEEEEEECCCCCCCH
EADAAIARMVQAGAQPVSTFALACELQADWKKPWANAMLEPFNQNLSEYGYVLQNFWNNY
HHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GNKVVADPFA
CCEEECCCCC
>Mature Secondary Structure 
TDRPADVISAITDEALPDKVSLADARAAGRFGHDKPTVENSVVLLIDHQIGLLASTRDT
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCCC
SSAAELKSNIVGLARVAKALELPTLITSSNAHWQNGDVLPEIKELFPETPIIRRTGIINA
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCC
YEDPTFRAAFDKIVEETGRDHVILAGVTIGTCTLFPTLSLQNDGYVVYPVIDAAGAWNRY
CCCCHHHHHHHHHHHHCCCCEEEEEECEEEHEEEEEEEEECCCCEEEEEEEECCCCCCCH
EADAAIARMVQAGAQPVSTFALACELQADWKKPWANAMLEPFNQNLSEYGYVLQNFWNNY
HHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GNKVVADPFA
CCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]