Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is hisB
Identifier: 119717267
GI number: 119717267
Start: 3240298
End: 3240906
Strand: Reverse
Name: hisB
Synonym: Noca_3043
Alternate gene names: 119717267
Gene position: 3240906-3240298 (Counterclockwise)
Preceding gene: 119717268
Following gene: 119717266
Centisome position: 65.0
GC content: 71.59
Gene sequence:
>609_bases ATGACGAGGACGGCACGCATCGAGCGGCAGACCAGCGAGTCCAAGGTGCTCGTCGAGGTCGACCTCGACGGCACCGGGCG CCACGACGTCTCGACCGGCGTGGGCTTCTACGACCACATGCTGACCGCGTTCGCCCGCCACGCGCTGGTCGACCTGACCG TGCAGACCGACGGCGACACCCACATCGACGCCCACCACACCGTCGAGGACACCGCGATCGCGCTCGGCCAGGCGCTGCGC CAGGCGCTCGGTGACAAGCGGGGCATCCGCCGGTTCGGCGACGCGACCGTGCCGCTGGACGAGGCGCTCGTGCAGGCCGT GGTCGATGTCTCCGGCCGGCCCTACTGCGTGCACACCGGCGAGCCCGAGGGGCAGCAGTACGTCCAGCTGGGTGGCACCA CGCCGGCGTACCTGGGCTCGCTGACCCAGCACGTCTTCGAGTCGATCGCGTTCCACGGCCACTTCGCCCTCCACGTCCGG GTGCTGGCCGGCCGCGAGCCGCACCACATCGTGGAGACCCAGTTCAAGGCGGTCGCCCGGGCCTTCCGCGACGCCGTCGC GCTCGACCCGCGCGAGACCGGGATCCCCAGCACCAAGGGCGCTTTGTGA
Upstream 100 bases:
>100_bases GGGAGACCGGCCCGGACGGCTGGCTGCGGGTCTCGATCGGCACCGCCGAGGAGATGCAGGCATTCAAGGACGCACTGACC CAGGTCAGGAAGGAAATGTG
Downstream 100 bases:
>100_bases CCCGTCCGAACGTGGTGGTCCTCGACTACGGCTCGGGGAACCTCCGCTCCGCCGTGCGCGCGGTCGAACGCGCCGGCGCC GAGGTCACGCTGACCGCCGA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTRTARIERQTSESKVLVEVDLDGTGRHDVSTGVGFYDHMLTAFARHALVDLTVQTDGDTHIDAHHTVEDTAIALGQALR QALGDKRGIRRFGDATVPLDEALVQAVVDVSGRPYCVHTGEPEGQQYVQLGGTTPAYLGSLTQHVFESIAFHGHFALHVR VLAGREPHHIVETQFKAVARAFRDAVALDPRETGIPSTKGAL
Sequences:
>Translated_202_residues MTRTARIERQTSESKVLVEVDLDGTGRHDVSTGVGFYDHMLTAFARHALVDLTVQTDGDTHIDAHHTVEDTAIALGQALR QALGDKRGIRRFGDATVPLDEALVQAVVDVSGRPYCVHTGEPEGQQYVQLGGTTPAYLGSLTQHVFESIAFHGHFALHVR VLAGREPHHIVETQFKAVARAFRDAVALDPRETGIPSTKGAL >Mature_201_residues TRTARIERQTSESKVLVEVDLDGTGRHDVSTGVGFYDHMLTAFARHALVDLTVQTDGDTHIDAHHTVEDTAIALGQALRQ ALGDKRGIRRFGDATVPLDEALVQAVVDVSGRPYCVHTGEPEGQQYVQLGGTTPAYLGSLTQHVFESIAFHGHFALHVRV LAGREPHHIVETQFKAVARAFRDAVALDPRETGIPSTKGAL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=200, Percent_Identity=40.5, Blast_Score=144, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6324776, Length=175, Percent_Identity=46.8571428571429, Blast_Score=142, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_NOCSJ (A1SL60)
Other databases:
- EMBL: CP000509 - RefSeq: YP_924232.1 - ProteinModelPortal: A1SL60 - SMR: A1SL60 - STRING: A1SL60 - GeneID: 4600160 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_3043 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: RQAVEYD - ProtClustDB: CLSK2783647 - BioCyc: NSP35761:NOCA_3043-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21936; Mature: 21805
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTARIERQTSESKVLVEVDLDGTGRHDVSTGVGFYDHMLTAFARHALVDLTVQTDGDT CCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCC HIDAHHTVEDTAIALGQALRQALGDKRGIRRFGDATVPLDEALVQAVVDVSGRPYCVHTG CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECC EPEGQQYVQLGGTTPAYLGSLTQHVFESIAFHGHFALHVRVLAGREPHHIVETQFKAVAR CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHH AFRDAVALDPRETGIPSTKGAL HHHHHHCCCCHHCCCCCCCCCC >Mature Secondary Structure TRTARIERQTSESKVLVEVDLDGTGRHDVSTGVGFYDHMLTAFARHALVDLTVQTDGDT CCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCC HIDAHHTVEDTAIALGQALRQALGDKRGIRRFGDATVPLDEALVQAVVDVSGRPYCVHTG CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECC EPEGQQYVQLGGTTPAYLGSLTQHVFESIAFHGHFALHVRVLAGREPHHIVETQFKAVAR CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHH AFRDAVALDPRETGIPSTKGAL HHHHHHCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA