Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is suhB [H]
Identifier: 119717136
GI number: 119717136
Start: 3092482
End: 3093360
Strand: Reverse
Name: suhB [H]
Synonym: Noca_2912
Alternate gene names: 119717136
Gene position: 3093360-3092482 (Counterclockwise)
Preceding gene: 119717137
Following gene: 119717135
Centisome position: 62.04
GC content: 74.4
Gene sequence:
>879_bases GTGACCACCCTGCCGTCGCACGCTGAGCCGTCCAACGCTGGGCCGTCCAACGCCGACCTGGCCGACCTGGCGCTCGAGGT GGCGCGGGAGGCGGCCGAGCTGGTCCGCGGTCGCCGCGCGGCCGGCGTGACGGTCGCGGCCACCAAGTCCAGCGAGGTGG ACATCGTCACCGAGGCGGACCGGGCCAGCGAGGCCCTGATCCGCCGGCTGGTCGCGGCCCGGCGCCCCGACGACGGCTTC CTCGGCGAGGAGGGCGACGACGTCGCCAGCACCAGCGGCATCCGCTGGATCGTCGACCCGATCGACGGCACCGTGAACTT CCTCTACGACCTGCCGCAGTACGCCGTCTCCATCGCCGCCGAGCGCGACGGGGAGGTCGTGGCCGGCGTGGTCATCAACG TGGCGCGGCGCACCGAGTACGTCGGGCACCGCGCCGACCGGGCCGAGCACGGCGGCGCCCCCGCCCGGGCGACCCGGGAC GGCGAGCCGCTCGCCGTACGCGCTCCGACGCCGCTGCGCCTGCGCCTGGTCGGCACCGGCTTCAACTACGACTCCCGGAT CCGCGGCCTGCAGGCCGCCGCCGTCGCCCGGCTGATCACCCGGATCCGCGACATCCGCCGCTCCGGGTCGTGCGCGCTCG ACCTGTGCCACCTGGCCGAGGGCGCGCTGGACGGGTACGTCGAGGAGGGCGTCAACCTGTGGGACCACGCCGCCGGTGGC CTGCTCGCCGAACTCGCCGGCGCGCGTCTCGAGCACCGGCCCGGAGTCGGCGGCAGCGACCTGGTGGTGTGTGCTCCGAC ACACGGCTTCGACGATTTCCTCGAGGCGGTTCAGGAAGCCGGTTTCACGGCCGATTCAGGCGTGCAACACGCCGAATGA
Upstream 100 bases:
>100_bases GCGCCAGCGTCGGCCGCTGGCCGGCCTGCTGGGACCGGTGCCCGGCGGGCTGCTGCGCGAACCCGCGCGCCGAGCGGCCG GCACTCGCGGGCGCCGACTC
Downstream 100 bases:
>100_bases GGGGCGGTTCCGGGGGGAATAGGGGCTCGTCACCCGATGTTCCTGATCCGCGACGTGGATGCGGTGTGGGAGATCCGGCC CGGATGGTGCACAATCTGCC
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTTLPSHAEPSNAGPSNADLADLALEVAREAAELVRGRRAAGVTVAATKSSEVDIVTEADRASEALIRRLVAARRPDDGF LGEEGDDVASTSGIRWIVDPIDGTVNFLYDLPQYAVSIAAERDGEVVAGVVINVARRTEYVGHRADRAEHGGAPARATRD GEPLAVRAPTPLRLRLVGTGFNYDSRIRGLQAAAVARLITRIRDIRRSGSCALDLCHLAEGALDGYVEEGVNLWDHAAGG LLAELAGARLEHRPGVGGSDLVVCAPTHGFDDFLEAVQEAGFTADSGVQHAE
Sequences:
>Translated_292_residues MTTLPSHAEPSNAGPSNADLADLALEVAREAAELVRGRRAAGVTVAATKSSEVDIVTEADRASEALIRRLVAARRPDDGF LGEEGDDVASTSGIRWIVDPIDGTVNFLYDLPQYAVSIAAERDGEVVAGVVINVARRTEYVGHRADRAEHGGAPARATRD GEPLAVRAPTPLRLRLVGTGFNYDSRIRGLQAAAVARLITRIRDIRRSGSCALDLCHLAEGALDGYVEEGVNLWDHAAGG LLAELAGARLEHRPGVGGSDLVVCAPTHGFDDFLEAVQEAGFTADSGVQHAE >Mature_291_residues TTLPSHAEPSNAGPSNADLADLALEVAREAAELVRGRRAAGVTVAATKSSEVDIVTEADRASEALIRRLVAARRPDDGFL GEEGDDVASTSGIRWIVDPIDGTVNFLYDLPQYAVSIAAERDGEVVAGVVINVARRTEYVGHRADRAEHGGAPARATRDG EPLAVRAPTPLRLRLVGTGFNYDSRIRGLQAAAVARLITRIRDIRRSGSCALDLCHLAEGALDGYVEEGVNLWDHAAGGL LAELAGARLEHRPGVGGSDLVVCAPTHGFDDFLEAVQEAGFTADSGVQHAE
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=259, Percent_Identity=33.2046332046332, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI5031789, Length=257, Percent_Identity=29.1828793774319, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI221625487, Length=257, Percent_Identity=29.1828793774319, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI221625507, Length=146, Percent_Identity=30.8219178082192, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1788882, Length=231, Percent_Identity=31.1688311688312, Blast_Score=112, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193202570, Length=232, Percent_Identity=31.0344827586207, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI193202572, Length=239, Percent_Identity=31.7991631799163, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6320493, Length=230, Percent_Identity=27.8260869565217, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321836, Length=221, Percent_Identity=28.0542986425339, Blast_Score=79, Evalue=7e-16, Organism=Drosophila melanogaster, GI24664922, Length=271, Percent_Identity=25.830258302583, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21357957, Length=277, Percent_Identity=31.4079422382672, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI21357303, Length=245, Percent_Identity=28.9795918367347, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24664918, Length=260, Percent_Identity=30.7692307692308, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24664926, Length=241, Percent_Identity=27.8008298755187, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357329, Length=208, Percent_Identity=27.4038461538462, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 30799; Mature: 30667
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLPSHAEPSNAGPSNADLADLALEVAREAAELVRGRRAAGVTVAATKSSEVDIVTEAD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCH RASEALIRRLVAARRPDDGFLGEEGDDVASTSGIRWIVDPIDGTVNFLYDLPQYAVSIAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH ERDGEVVAGVVINVARRTEYVGHRADRAEHGGAPARATRDGEPLAVRAPTPLRLRLVGTG CCCCCEEHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECC FNYDSRIRGLQAAAVARLITRIRDIRRSGSCALDLCHLAEGALDGYVEEGVNLWDHAAGG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LLAELAGARLEHRPGVGGSDLVVCAPTHGFDDFLEAVQEAGFTADSGVQHAE HHHHHHCCHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TTLPSHAEPSNAGPSNADLADLALEVAREAAELVRGRRAAGVTVAATKSSEVDIVTEAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCH RASEALIRRLVAARRPDDGFLGEEGDDVASTSGIRWIVDPIDGTVNFLYDLPQYAVSIAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH ERDGEVVAGVVINVARRTEYVGHRADRAEHGGAPARATRDGEPLAVRAPTPLRLRLVGTG CCCCCEEHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECC FNYDSRIRGLQAAAVARLITRIRDIRRSGSCALDLCHLAEGALDGYVEEGVNLWDHAAGG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LLAELAGARLEHRPGVGGSDLVVCAPTHGFDDFLEAVQEAGFTADSGVQHAE HHHHHHCCHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]