Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717135

Identifier: 119717135

GI number: 119717135

Start: 3092021

End: 3092311

Strand: Reverse

Name: 119717135

Synonym: Noca_2911

Alternate gene names: NA

Gene position: 3092311-3092021 (Counterclockwise)

Preceding gene: 119717136

Following gene: 119717132

Centisome position: 62.02

GC content: 65.64

Gene sequence:

>291_bases
ATGGCGACTGACTACGACGCACCGCGCAAGAACGAGGACGAGCAGTCCGAGGAGAGCATCGAAGAGCTCAAGGCGCGCCG
TCACGACAAGAACTCCGGCAAGGTCGACGAGGACGAGGCGGAGGCCGCCGAGTCCTTCGAGCTGCCCGGCGCCGACCTCT
CCCACGAGGAGCTCGCCGTGGAGGTCAAGCCGAAGCAGGACGACGAGTTCACCTGCATGAGCTGCTTCCTGGTCCACCAC
CGCAGCCAGCTCGCCGACCCCAAGAAGATGATCTGCCGCGACTGCGCCTGA

Upstream 100 bases:

>100_bases
AGATCCGGCCCGGATGGTGCACAATCTGCCGCGCCGACGATGCGACGAAGGCAGGACCGAACAGACGTGGGGCAGCAGGT
TCCAGGGGAGTGAGTGACGG

Downstream 100 bases:

>100_bases
GCGGGCAAGACGCGCCGGCTCAGGCGCTCTGGTGGTCCTTGCGCAGGTCGGGGGGCAGGTGGCCGGTGGAGCGGGCGTAG
TACGACGCCGCCCGGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAVEVKPKQDDEFTCMSCFLVHH
RSQLADPKKMICRDCA

Sequences:

>Translated_96_residues
MATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAVEVKPKQDDEFTCMSCFLVHH
RSQLADPKKMICRDCA
>Mature_95_residues
ATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAVEVKPKQDDEFTCMSCFLVHHR
SQLADPKKMICRDCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10926; Mature: 10795

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEE
EVKPKQDDEFTCMSCFLVHHRSQLADPKKMICRDCA
ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
ATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAV
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEE
EVKPKQDDEFTCMSCFLVHHRSQLADPKKMICRDCA
ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA