Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717135
Identifier: 119717135
GI number: 119717135
Start: 3092021
End: 3092311
Strand: Reverse
Name: 119717135
Synonym: Noca_2911
Alternate gene names: NA
Gene position: 3092311-3092021 (Counterclockwise)
Preceding gene: 119717136
Following gene: 119717132
Centisome position: 62.02
GC content: 65.64
Gene sequence:
>291_bases ATGGCGACTGACTACGACGCACCGCGCAAGAACGAGGACGAGCAGTCCGAGGAGAGCATCGAAGAGCTCAAGGCGCGCCG TCACGACAAGAACTCCGGCAAGGTCGACGAGGACGAGGCGGAGGCCGCCGAGTCCTTCGAGCTGCCCGGCGCCGACCTCT CCCACGAGGAGCTCGCCGTGGAGGTCAAGCCGAAGCAGGACGACGAGTTCACCTGCATGAGCTGCTTCCTGGTCCACCAC CGCAGCCAGCTCGCCGACCCCAAGAAGATGATCTGCCGCGACTGCGCCTGA
Upstream 100 bases:
>100_bases AGATCCGGCCCGGATGGTGCACAATCTGCCGCGCCGACGATGCGACGAAGGCAGGACCGAACAGACGTGGGGCAGCAGGT TCCAGGGGAGTGAGTGACGG
Downstream 100 bases:
>100_bases GCGGGCAAGACGCGCCGGCTCAGGCGCTCTGGTGGTCCTTGCGCAGGTCGGGGGGCAGGTGGCCGGTGGAGCGGGCGTAG TACGACGCCGCCCGGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAVEVKPKQDDEFTCMSCFLVHH RSQLADPKKMICRDCA
Sequences:
>Translated_96_residues MATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAVEVKPKQDDEFTCMSCFLVHH RSQLADPKKMICRDCA >Mature_95_residues ATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAVEVKPKQDDEFTCMSCFLVHHR SQLADPKKMICRDCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10926; Mature: 10795
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAV CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEE EVKPKQDDEFTCMSCFLVHHRSQLADPKKMICRDCA ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure ATDYDAPRKNEDEQSEESIEELKARRHDKNSGKVDEDEAEAAESFELPGADLSHEELAV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEE EVKPKQDDEFTCMSCFLVHHRSQLADPKKMICRDCA ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA