Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717123
Identifier: 119717123
GI number: 119717123
Start: 3082720
End: 3083442
Strand: Reverse
Name: 119717123
Synonym: Noca_2899
Alternate gene names: NA
Gene position: 3083442-3082720 (Counterclockwise)
Preceding gene: 119717124
Following gene: 119717122
Centisome position: 61.84
GC content: 68.05
Gene sequence:
>723_bases ATGATCGTCCTGCCCGCAATGCCGCCCGAGCAGACAGCCTCGTGGTGGGGGATCCTCGACCTCCACGAGCGGCTCGCCGA GGGCTGGACGCTGATCGGCGGCCAGCTCGTCCACTTGCACTGCGCTGAGCGGGGGCAGTTCCTGGTGCGACCGACGAACG ACGCCGACACAGTCATCGACGTACGGGCCGACCCAACGATGCTCGCCACCTTTACCGAGACCCTGACCGACCTCGGGTTC AGATCAGCCGGCATCTCGGCGGAGGGTCTCCAACATCGTTGGGTTCGCGGCAAGGCATCGATCGACGTGCTGCTTCCGGA CGGGATCGGCGAGCGAGCCAGCCTTCGCCAAGGCGTCACGGGTAGTCCGACACTCCCGACCGCAGGTGGGACTCAAGCGC TGCAGCGCAGCGAGACCGTCCGGGTGTCGGTCGCGGGTCGCGAAGGATCCGTACGCCGGCCCAACCTCGTCGGCGCACTG GTCGGTAAGGCGGCAGCGCTCAGCAACGCGGGGGACCCTGGCCTCGGTCGGCACAGGCGCGACTTCGTCGTCCTCGCTGG GTTGCTCACAGCCCGCGACTTCCGGAACCAAGAGCTCACGAGGAAGGACCGCCGGCGGCTGCGCGCCATGGTCACCGCGG TCGGGAAGGACCGGACGCTGCTGATCGAGATCCCGGATGTCCAGATCTCGCTCGATCGGCTCATCACGGCGGGGGAGTTG TAG
Upstream 100 bases:
>100_bases GGCTCGCGGCCGATCTCGCCGAGCATCGCGGGCCACGCGAGGAGGCACGTGCAGCGCAGCTGCTGCACGAGCTGGCCGTG GGGTGGAAGGCTGCGGATCG
Downstream 100 bases:
>100_bases TCATGCCGGAGGACTTCGTTGTCGAGTTGCAGCGAAGATTGATGACCCGCCCGCGGGGCAAGTTGGCGAGATCGGTGGAC CGGTGACTGGTCGTCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MIVLPAMPPEQTASWWGILDLHERLAEGWTLIGGQLVHLHCAERGQFLVRPTNDADTVIDVRADPTMLATFTETLTDLGF RSAGISAEGLQHRWVRGKASIDVLLPDGIGERASLRQGVTGSPTLPTAGGTQALQRSETVRVSVAGREGSVRRPNLVGAL VGKAAALSNAGDPGLGRHRRDFVVLAGLLTARDFRNQELTRKDRRRLRAMVTAVGKDRTLLIEIPDVQISLDRLITAGEL
Sequences:
>Translated_240_residues MIVLPAMPPEQTASWWGILDLHERLAEGWTLIGGQLVHLHCAERGQFLVRPTNDADTVIDVRADPTMLATFTETLTDLGF RSAGISAEGLQHRWVRGKASIDVLLPDGIGERASLRQGVTGSPTLPTAGGTQALQRSETVRVSVAGREGSVRRPNLVGAL VGKAAALSNAGDPGLGRHRRDFVVLAGLLTARDFRNQELTRKDRRRLRAMVTAVGKDRTLLIEIPDVQISLDRLITAGEL >Mature_240_residues MIVLPAMPPEQTASWWGILDLHERLAEGWTLIGGQLVHLHCAERGQFLVRPTNDADTVIDVRADPTMLATFTETLTDLGF RSAGISAEGLQHRWVRGKASIDVLLPDGIGERASLRQGVTGSPTLPTAGGTQALQRSETVRVSVAGREGSVRRPNLVGAL VGKAAALSNAGDPGLGRHRRDFVVLAGLLTARDFRNQELTRKDRRRLRAMVTAVGKDRTLLIEIPDVQISLDRLITAGEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25987; Mature: 25987
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLPAMPPEQTASWWGILDLHERLAEGWTLIGGQLVHLHCAERGQFLVRPTNDADTVID CEEECCCCCCCCCCHHHHHHHHHHHHCCEEEECCEEEEEEECCCCCEEEEECCCCCCEEE VRADPTMLATFTETLTDLGFRSAGISAEGLQHRWVRGKASIDVLLPDGIGERASLRQGVT ECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCEEEEEECCCCCCHHHHHCCCC GSPTLPTAGGTQALQRSETVRVSVAGREGSVRRPNLVGALVGKAAALSNAGDPGLGRHRR CCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH DFVVLAGLLTARDFRNQELTRKDRRRLRAMVTAVGKDRTLLIEIPDVQISLDRLITAGEL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHCCCCC >Mature Secondary Structure MIVLPAMPPEQTASWWGILDLHERLAEGWTLIGGQLVHLHCAERGQFLVRPTNDADTVID CEEECCCCCCCCCCHHHHHHHHHHHHCCEEEECCEEEEEEECCCCCEEEEECCCCCCEEE VRADPTMLATFTETLTDLGFRSAGISAEGLQHRWVRGKASIDVLLPDGIGERASLRQGVT ECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCEEEEEECCCCCCHHHHHCCCC GSPTLPTAGGTQALQRSETVRVSVAGREGSVRRPNLVGALVGKAAALSNAGDPGLGRHRR CCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH DFVVLAGLLTARDFRNQELTRKDRRRLRAMVTAVGKDRTLLIEIPDVQISLDRLITAGEL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA