Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717124
Identifier: 119717124
GI number: 119717124
Start: 3083439
End: 3084212
Strand: Reverse
Name: 119717124
Synonym: Noca_2900
Alternate gene names: NA
Gene position: 3084212-3083439 (Counterclockwise)
Preceding gene: 119717125
Following gene: 119717123
Centisome position: 61.86
GC content: 67.57
Gene sequence:
>774_bases TTGGCAATCCCGCACGGCTTCCACAATCCTTTAAACTCTTCTAGGATTGTGCGCATGGGAGCAGTGAGCGTCGCGCAGGC CGCGGAGCGGCTGGGCGTCAGCGTGCCCCGGATCCACCAGCGCATCGCGGACGGCTCGCTGGTTGCTGAGCGGATCGGGT CCCAGTGGGTGGTTGACGAGCGTTCCCTCCTGCATGTCCAAGAGCTCAGCAAAGCGGGCCGCCCGCATTCGGCGCGTTCC GCATGGGCGGTCATCGCGGCGTCCGAGGGCGACCGTGACCGGGTGGTTGTCAGCGGGCCTGCGGTGTCGTCGCGGGCGCG GATGCAGTTGAGGCGTTTGCTCGAGCTGGCCGCGGAGCCCGTCGCCGATGAGGAAGTCGTCAGGCAGCTTGTGGTGTCGC TCCGCTCGGTGTTCCGCAACCGGGCCCAGCGTCGACTGCTCCGCGCGGCTGCGGCTGACCTCGACGATCTCAGGGCAGAC GATCGCTGGGCCATGCTCGTCGACCTGGGGGCGAGCGGCATCGCCTCGCCCGACGTCGAGGGATACCTCGGCGAATCGGA TGTGGATGGGGTCGTGAGGGATTACCTGTTGGTCGAGGCTGACAGGGATGCGAACGTCGTGTTGCACGTCCTCCCAGATG CGCAGTACCCGTATCCGGACTCACGTCTTCGGCTCGCGGCCGATCTCGCCGAGCATCGCGGGCCACGCGAGGAGGCACGT GCAGCGCAGCTGCTGCACGAGCTGGCCGTGGGGTGGAAGGCTGCGGATCGATGA
Upstream 100 bases:
>100_bases GGCGCAACTTGTGAAAAGCGGCTCTGGCCTGCGGTGATGTGATCGGGGCTCGTCAGCGCGAGCCTCGAGAGCGGGCCGTT GGGCCCACTTTGGGCTCGCT
Downstream 100 bases:
>100_bases TCGTCCTGCCCGCAATGCCGCCCGAGCAGACAGCCTCGTGGTGGGGGATCCTCGACCTCCACGAGCGGCTCGCCGAGGGC TGGACGCTGATCGGCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAIPHGFHNPLNSSRIVRMGAVSVAQAAERLGVSVPRIHQRIADGSLVAERIGSQWVVDERSLLHVQELSKAGRPHSARS AWAVIAASEGDRDRVVVSGPAVSSRARMQLRRLLELAAEPVADEEVVRQLVVSLRSVFRNRAQRRLLRAAAADLDDLRAD DRWAMLVDLGASGIASPDVEGYLGESDVDGVVRDYLLVEADRDANVVLHVLPDAQYPYPDSRLRLAADLAEHRGPREEAR AAQLLHELAVGWKAADR
Sequences:
>Translated_257_residues MAIPHGFHNPLNSSRIVRMGAVSVAQAAERLGVSVPRIHQRIADGSLVAERIGSQWVVDERSLLHVQELSKAGRPHSARS AWAVIAASEGDRDRVVVSGPAVSSRARMQLRRLLELAAEPVADEEVVRQLVVSLRSVFRNRAQRRLLRAAAADLDDLRAD DRWAMLVDLGASGIASPDVEGYLGESDVDGVVRDYLLVEADRDANVVLHVLPDAQYPYPDSRLRLAADLAEHRGPREEAR AAQLLHELAVGWKAADR >Mature_256_residues AIPHGFHNPLNSSRIVRMGAVSVAQAAERLGVSVPRIHQRIADGSLVAERIGSQWVVDERSLLHVQELSKAGRPHSARSA WAVIAASEGDRDRVVVSGPAVSSRARMQLRRLLELAAEPVADEEVVRQLVVSLRSVFRNRAQRRLLRAAAADLDDLRADD RWAMLVDLGASGIASPDVEGYLGESDVDGVVRDYLLVEADRDANVVLHVLPDAQYPYPDSRLRLAADLAEHRGPREEARA AQLLHELAVGWKAADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28164; Mature: 28033
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPHGFHNPLNSSRIVRMGAVSVAQAAERLGVSVPRIHQRIADGSLVAERIGSQWVVDE CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHCCCCCEECH RSLLHVQELSKAGRPHSARSAWAVIAASEGDRDRVVVSGPAVSSRARMQLRRLLELAAEP HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC VADEEVVRQLVVSLRSVFRNRAQRRLLRAAAADLDDLRADDRWAMLVDLGASGIASPDVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCCC GYLGESDVDGVVRDYLLVEADRDANVVLHVLPDAQYPYPDSRLRLAADLAEHRGPREEAR CCCCCCHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHH AAQLLHELAVGWKAADR HHHHHHHHHHCHHCCCC >Mature Secondary Structure AIPHGFHNPLNSSRIVRMGAVSVAQAAERLGVSVPRIHQRIADGSLVAERIGSQWVVDE CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHCCCCCEECH RSLLHVQELSKAGRPHSARSAWAVIAASEGDRDRVVVSGPAVSSRARMQLRRLLELAAEP HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC VADEEVVRQLVVSLRSVFRNRAQRRLLRAAAADLDDLRADDRWAMLVDLGASGIASPDVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCCC GYLGESDVDGVVRDYLLVEADRDANVVLHVLPDAQYPYPDSRLRLAADLAEHRGPREEAR CCCCCCHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHH AAQLLHELAVGWKAADR HHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA