Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717122
Identifier: 119717122
GI number: 119717122
Start: 3081849
End: 3082298
Strand: Reverse
Name: 119717122
Synonym: Noca_2898
Alternate gene names: NA
Gene position: 3082298-3081849 (Counterclockwise)
Preceding gene: 119717123
Following gene: 119717121
Centisome position: 61.82
GC content: 63.11
Gene sequence:
>450_bases ATGGCGAAAATCGAGGGACAGATCACGATCGGGCGTCCCGTGGAAGTGGTGTTCGACTACGTGGCGGATCAGACCAACGA ACTGCAGTACAACCCGAAAATGGTGCGCGCCGAGAAGGAGACCGCCGGGCCGATCGGCAAGGGGACCCGGTTCAAGTCGG CGGTGCGGTCGGGGGGACGCACCGCGGAGATGCTTATTGAGAACACTGGCTATGACCGGCCAAGGCTGCTCGCCTCCACG ACGACGATGAAGCAAATGGACATTGCGTACACGCTCAAGTTCGAGCCTGTCGCGGACGGAACGCGTATGCGGTGGTCCGG AGAGGTACGGCCCAAGGGCGGACTCCGACTCCTGGGGCCGCTAGTCACCTGGATGGGGACGCGCCAGGAACAGCGAATCT GGTCGAGCCTGAAGAGTCATCTGGAGGGCGCACCAGTCGGCGAGGGCTAG
Upstream 100 bases:
>100_bases CGTCCGTCCCTGAGTCCTGGGCGGCGGATCCGCTCTGGCTTTTCGCGTTCGATTGCAGTGTGCTGATCGCGGAAGCCGGT AGCAGGGTCGGAGGATCGAC
Downstream 100 bases:
>100_bases GGCGTGTCTGCTAAATCGAGGCGGTTGGGTGTCGGCGGCCACGAGAAACTGCCCGGAGACGGCCACGAAGCTGCCCGCTG GCGGACATGAGAACTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAKIEGQITIGRPVEVVFDYVADQTNELQYNPKMVRAEKETAGPIGKGTRFKSAVRSGGRTAEMLIENTGYDRPRLLAST TTMKQMDIAYTLKFEPVADGTRMRWSGEVRPKGGLRLLGPLVTWMGTRQEQRIWSSLKSHLEGAPVGEG
Sequences:
>Translated_149_residues MAKIEGQITIGRPVEVVFDYVADQTNELQYNPKMVRAEKETAGPIGKGTRFKSAVRSGGRTAEMLIENTGYDRPRLLAST TTMKQMDIAYTLKFEPVADGTRMRWSGEVRPKGGLRLLGPLVTWMGTRQEQRIWSSLKSHLEGAPVGEG >Mature_148_residues AKIEGQITIGRPVEVVFDYVADQTNELQYNPKMVRAEKETAGPIGKGTRFKSAVRSGGRTAEMLIENTGYDRPRLLASTT TMKQMDIAYTLKFEPVADGTRMRWSGEVRPKGGLRLLGPLVTWMGTRQEQRIWSSLKSHLEGAPVGEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16556; Mature: 16425
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIEGQITIGRPVEVVFDYVADQTNELQYNPKMVRAEKETAGPIGKGTRFKSAVRSGGR CCEECCEEEECCHHHHHHHHHHCCCCCEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCC TAEMLIENTGYDRPRLLASTTTMKQMDIAYTLKFEPVADGTRMRWSGEVRPKGGLRLLGP EEEEEEECCCCCCCEEEEHHHHHHHEEEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHH LVTWMGTRQEQRIWSSLKSHLEGAPVGEG HHHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AKIEGQITIGRPVEVVFDYVADQTNELQYNPKMVRAEKETAGPIGKGTRFKSAVRSGGR CEECCEEEECCHHHHHHHHHHCCCCCEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCC TAEMLIENTGYDRPRLLASTTTMKQMDIAYTLKFEPVADGTRMRWSGEVRPKGGLRLLGP EEEEEEECCCCCCCEEEEHHHHHHHEEEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHH LVTWMGTRQEQRIWSSLKSHLEGAPVGEG HHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA