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The map label for this gene is cobT [H]

Identifier: 119717110

GI number: 119717110

Start: 3067553

End: 3068593

Strand: Reverse

Name: cobT [H]

Synonym: Noca_2886

Alternate gene names: 119717110

Gene position: 3068593-3067553 (Counterclockwise)

Preceding gene: 119717111

Following gene: 119717109

Centisome position: 61.55

GC content: 72.43

Gene sequence:

>1041_bases
ATGCCCTACGTCTCCCCACCTTCCGACATCGCCCGCGACCACGCGACCAAGCGCCTCGCGGCTCTGGCCACCCCACCCGG
CGCGCTCGGCCGCATCGGCGAGCTCGGCGTCTGGATCGCGTCCGTCCAGGGACACGTGCCGCCGCACCCCGTCGACAACG
TGCGGCTGGTGATCTTCGCCGGCGATCACGGCGTCGCGGCCCATGGGGTCTCGGCCTTCCCGCCCGCCGTCACCGGCGCC
ATGGTCCGAACCTTCCTGGCAGGCAAGGCGGGCGTCAATGCGCTAGCGCAGATCCACGGCGTCGCCGTGCGAGTCCTCGA
CATCGGCGTCGATGAGGACTTCCACGATCTGGACGAGGACGTCCGCAACACCCTCACTGCGCACAAGATCCGCCGCGCCA
GCGGCGCGATCCACCTCGCGGACGCGCTCACGCCTGAAGAGACACGCGCCGCGTTGGACGCCGGCGCGGCCGTCGCGCGT
CAGGAGATCAAGGCCGGGGCACAGCTGCTGATCAGCGGCGACATGGGCATCGGCAACACCACACCTGCCGCCGCCCTCGT
CGCCGCCGGCCTCGGCTTGCCAGCAGCGGACGTCTCCGGACGGGGCACCGGCATCGACGACGCCGCACTGACGCACAAGA
TCGAGGTCGTCCAGACGGCACTCGACCGGGCCGGCGCCCGCCAGGACGACCCCATCGAGACGCTCACCGCTCTCGGCAGC
GCGGACCTCGCGGCCTCGACCGGCTTCATGCTCGCAGCTGCCCAGGACGGGGTACCTGTCCTCCTCGACGGCCTGATGAG
CGTCGCGTGTGCCCTGACCGCCGATCGGATGGAGCCCGGTGCCGCTGCGTGGTTCGCCGCCGGCCACCGCTCGACCGAGC
CCGCCCAGTCGCTCGCCCTGGCCAAGATGGGGCTGGAGCCCCTGCTCGACGTCGGCATGCGGCTGGGCGAGGGATCCGGC
GCGGTGGCCGCCGTACCGCTCATCCGTGGCGCCGCGGCGCTCCTCAGCAGCGTGGCGCTGCTCGAGGAGCTCACGACCTG
A

Upstream 100 bases:

>100_bases
GTGCGCATCGCCGTGCGCCCACCCGCCACCACCCGCCACCTGCTCGAAGCCCTCGACCACATCCGTGCCCCGCACCTCAC
TCACTGACAGGCCCCCGCGC

Downstream 100 bases:

>100_bases
TGCGGCCATGAAGGCGCGTGCCGCCGGGCTCCTGCTCGGCTACGCAGCCGACCGGATGCTCGGCGACCCCGCACACCGCC
ATCCCGTCGCCGGTTTCGGC

Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Products: NA

Alternate protein names: NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MPYVSPPSDIARDHATKRLAALATPPGALGRIGELGVWIASVQGHVPPHPVDNVRLVIFAGDHGVAAHGVSAFPPAVTGA
MVRTFLAGKAGVNALAQIHGVAVRVLDIGVDEDFHDLDEDVRNTLTAHKIRRASGAIHLADALTPEETRAALDAGAAVAR
QEIKAGAQLLISGDMGIGNTTPAAALVAAGLGLPAADVSGRGTGIDDAALTHKIEVVQTALDRAGARQDDPIETLTALGS
ADLAASTGFMLAAAQDGVPVLLDGLMSVACALTADRMEPGAAAWFAAGHRSTEPAQSLALAKMGLEPLLDVGMRLGEGSG
AVAAVPLIRGAAALLSSVALLEELTT

Sequences:

>Translated_346_residues
MPYVSPPSDIARDHATKRLAALATPPGALGRIGELGVWIASVQGHVPPHPVDNVRLVIFAGDHGVAAHGVSAFPPAVTGA
MVRTFLAGKAGVNALAQIHGVAVRVLDIGVDEDFHDLDEDVRNTLTAHKIRRASGAIHLADALTPEETRAALDAGAAVAR
QEIKAGAQLLISGDMGIGNTTPAAALVAAGLGLPAADVSGRGTGIDDAALTHKIEVVQTALDRAGARQDDPIETLTALGS
ADLAASTGFMLAAAQDGVPVLLDGLMSVACALTADRMEPGAAAWFAAGHRSTEPAQSLALAKMGLEPLLDVGMRLGEGSG
AVAAVPLIRGAAALLSSVALLEELTT
>Mature_345_residues
PYVSPPSDIARDHATKRLAALATPPGALGRIGELGVWIASVQGHVPPHPVDNVRLVIFAGDHGVAAHGVSAFPPAVTGAM
VRTFLAGKAGVNALAQIHGVAVRVLDIGVDEDFHDLDEDVRNTLTAHKIRRASGAIHLADALTPEETRAALDAGAAVARQ
EIKAGAQLLISGDMGIGNTTPAAALVAAGLGLPAADVSGRGTGIDDAALTHKIEVVQTALDRAGARQDDPIETLTALGSA
DLAASTGFMLAAAQDGVPVLLDGLMSVACALTADRMEPGAAAWFAAGHRSTEPAQSLALAKMGLEPLLDVGMRLGEGSGA
VAAVPLIRGAAALLSSVALLEELTT

Specific function: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) [H]

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobT family [H]

Homologues:

Organism=Escherichia coli, GI1788300, Length=332, Percent_Identity=34.3373493975904, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR023195
- InterPro:   IPR017846 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: =2.4.2.21 [H]

Molecular weight: Translated: 34946; Mature: 34815

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYVSPPSDIARDHATKRLAALATPPGALGRIGELGVWIASVQGHVPPHPVDNVRLVIFA
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHEEEECCCCCCCCCCCCEEEEEEE
GDHGVAAHGVSAFPPAVTGAMVRTFLAGKAGVNALAQIHGVAVRVLDIGVDEDFHDLDED
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHH
VRNTLTAHKIRRASGAIHLADALTPEETRAALDAGAAVARQEIKAGAQLLISGDMGIGNT
HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
TPAAALVAAGLGLPAADVSGRGTGIDDAALTHKIEVVQTALDRAGARQDDPIETLTALGS
CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
ADLAASTGFMLAAAQDGVPVLLDGLMSVACALTADRMEPGAAAWFAAGHRSTEPAQSLAL
CHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHH
AKMGLEPLLDVGMRLGEGSGAVAAVPLIRGAAALLSSVALLEELTT
HHHCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYVSPPSDIARDHATKRLAALATPPGALGRIGELGVWIASVQGHVPPHPVDNVRLVIFA
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHEEEECCCCCCCCCCCCEEEEEEE
GDHGVAAHGVSAFPPAVTGAMVRTFLAGKAGVNALAQIHGVAVRVLDIGVDEDFHDLDED
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHH
VRNTLTAHKIRRASGAIHLADALTPEETRAALDAGAAVARQEIKAGAQLLISGDMGIGNT
HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
TPAAALVAAGLGLPAADVSGRGTGIDDAALTHKIEVVQTALDRAGARQDDPIETLTALGS
CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
ADLAASTGFMLAAAQDGVPVLLDGLMSVACALTADRMEPGAAAWFAAGHRSTEPAQSLAL
CHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHH
AKMGLEPLLDVGMRLGEGSGAVAAVPLIRGAAALLSSVALLEELTT
HHHCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA