Click here to switch to the map view.

The map label for this gene is 119717108

Identifier: 119717108

GI number: 119717108

Start: 3065945

End: 3066625

Strand: Reverse

Name: 119717108

Synonym: Noca_2884

Alternate gene names: NA

Gene position: 3066625-3065945 (Counterclockwise)

Preceding gene: 119717109

Following gene: 119717107

Centisome position: 61.51

GC content: 69.75

Gene sequence:

>681_bases
ATGAGCGTCGTGCTCGTCGGCATGTCCGTCAGCGACGTCGATCGTCGTGACCATCTGTTCACGTGCGCGCGGCCCTTGGG
CGGCACCGTCGCGTTCCTGCAGATGGGCGACCCGTCACTCTCCGCCGAGCTCACCCGCCTCGCCGACGACGGAGCCACCA
CCATCACGCTCGTCGGCGTCGACACCGGCTCTTTGGCGCCCGGCCGATCCTGGTTGCGCAGGATCGCTGCGCACTGGTGG
CGCGAGCGCGCGGGCCGCAGGCCGACCATCAGTGTCGCCACCGAGTTGGCCACGGACCTGGACCAGATCGGCGCCTGCTT
GCAGAGCGTGCGACCCATCACCGGCGCCGAGCCCGGCCTGACCTCCGAGGCGTGGGAGCACGTGGCAGGCCATCGCCACC
AGGTCATGGTCTGCCGCGGACCCCGCTGCACGGCAATGGGCCAGGTCGACAACCTCCGGGCCATGGTCGTTGCGCTCGTG
GAGCACCAGCTGGGCGACAACGACGTGCTCCTCGTGCACACCGGCTGCCAGTCGCCCTGCAACCAGGCGCCCGTGATCAG
CGTCCAGCCCGACGACGTCTGGTACGGCGGCGTCGACCCCGCGATGGCATCGCTCATCGTCGCCGAGCACTTCATCGACA
ACCGCCCGATCGAGAGCCATCGACTGCCCAGATCCCGCTAG

Upstream 100 bases:

>100_bases
TCGAGCCTCGTGACATCGCAACCGCCGTTCGGCTCGGCGCGCGTGTCGGGGCGGGCGCGGCTCTCGTGGCGGCCGCAGTC
GCCGTACTCCGGAGATCGCG

Downstream 100 bases:

>100_bases
CCGGACGGGATCCCTGCCGGGGCGGGACTCCGCTAGAGTGCCCTACGCATGCATGAGGAAGCCGGTGAGAGTCCGGCGCA
GTAGCGCTACTGTGACACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NADHUbiquinone Oxidoreductase; Ferredoxin-Like Protein; Cobalamin Biosynthesis CbiX Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSVVLVGMSVSDVDRRDHLFTCARPLGGTVAFLQMGDPSLSAELTRLADDGATTITLVGVDTGSLAPGRSWLRRIAAHWW
RERAGRRPTISVATELATDLDQIGACLQSVRPITGAEPGLTSEAWEHVAGHRHQVMVCRGPRCTAMGQVDNLRAMVVALV
EHQLGDNDVLLVHTGCQSPCNQAPVISVQPDDVWYGGVDPAMASLIVAEHFIDNRPIESHRLPRSR

Sequences:

>Translated_226_residues
MSVVLVGMSVSDVDRRDHLFTCARPLGGTVAFLQMGDPSLSAELTRLADDGATTITLVGVDTGSLAPGRSWLRRIAAHWW
RERAGRRPTISVATELATDLDQIGACLQSVRPITGAEPGLTSEAWEHVAGHRHQVMVCRGPRCTAMGQVDNLRAMVVALV
EHQLGDNDVLLVHTGCQSPCNQAPVISVQPDDVWYGGVDPAMASLIVAEHFIDNRPIESHRLPRSR
>Mature_225_residues
SVVLVGMSVSDVDRRDHLFTCARPLGGTVAFLQMGDPSLSAELTRLADDGATTITLVGVDTGSLAPGRSWLRRIAAHWWR
ERAGRRPTISVATELATDLDQIGACLQSVRPITGAEPGLTSEAWEHVAGHRHQVMVCRGPRCTAMGQVDNLRAMVVALVE
HQLGDNDVLLVHTGCQSPCNQAPVISVQPDDVWYGGVDPAMASLIVAEHFIDNRPIESHRLPRSR

Specific function: Unknown

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24468; Mature: 24337

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVLVGMSVSDVDRRDHLFTCARPLGGTVAFLQMGDPSLSAELTRLADDGATTITLVGV
CEEEEEECCHHCCCCHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEE
DTGSLAPGRSWLRRIAAHWWRERAGRRPTISVATELATDLDQIGACLQSVRPITGAEPGL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TSEAWEHVAGHRHQVMVCRGPRCTAMGQVDNLRAMVVALVEHQLGDNDVLLVHTGCQSPC
CHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
NQAPVISVQPDDVWYGGVDPAMASLIVAEHFIDNRPIESHRLPRSR
CCCCEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
SVVLVGMSVSDVDRRDHLFTCARPLGGTVAFLQMGDPSLSAELTRLADDGATTITLVGV
EEEEEECCHHCCCCHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEE
DTGSLAPGRSWLRRIAAHWWRERAGRRPTISVATELATDLDQIGACLQSVRPITGAEPGL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TSEAWEHVAGHRHQVMVCRGPRCTAMGQVDNLRAMVVALVEHQLGDNDVLLVHTGCQSPC
CHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
NQAPVISVQPDDVWYGGVDPAMASLIVAEHFIDNRPIESHRLPRSR
CCCCEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA