Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717107

Identifier: 119717107

GI number: 119717107

Start: 3065534

End: 3065752

Strand: Reverse

Name: 119717107

Synonym: Noca_2883

Alternate gene names: NA

Gene position: 3065752-3065534 (Counterclockwise)

Preceding gene: 119717108

Following gene: 119717106

Centisome position: 61.49

GC content: 66.21

Gene sequence:

>219_bases
ATGTCGCAGTCTGCTGTGACGCCGATCTCCGGCGCCGTTTCTGTTCCCACCATCCCGCTGCGAGAGCTCGCTCCCTGGGC
GCTGTTCTTCGGCCTGCTCGCGGTCCTGGTGATCTTCTTCGTGAGCGCCGACCAGGGTGCCGTCTCGATCCCGTCGGGCA
ACGCGATCCACGAGTGGGTCCACGACGGTCGTCACCTGCTGGGCTACCCCTGCCACTGA

Upstream 100 bases:

>100_bases
TGACACGTCCTCCGGGGTGACCCGGTCGAGGTGGAGCCAGACCCGAATGCCTGCCACCACCCATTGACCGGGGGCGCATC
CACCCCCTCGAGGAGGACTC

Downstream 100 bases:

>100_bases
CGCCGCGCCCGGAATGACTTCCGGGCGGCCTCTTCCGACCCGTCCCTGACGGGCGCGACGCATCCCGTCACATGATCTCG
CCCCCAGTAGGCCTGCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSQSAVTPISGAVSVPTIPLRELAPWALFFGLLAVLVIFFVSADQGAVSIPSGNAIHEWVHDGRHLLGYPCH

Sequences:

>Translated_72_residues
MSQSAVTPISGAVSVPTIPLRELAPWALFFGLLAVLVIFFVSADQGAVSIPSGNAIHEWVHDGRHLLGYPCH
>Mature_71_residues
SQSAVTPISGAVSVPTIPLRELAPWALFFGLLAVLVIFFVSADQGAVSIPSGNAIHEWVHDGRHLLGYPCH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7666; Mature: 7535

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSAVTPISGAVSVPTIPLRELAPWALFFGLLAVLVIFFVSADQGAVSIPSGNAIHEWV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHH
HDGRHLLGYPCH
HCCCCCCCCCCC
>Mature Secondary Structure 
SQSAVTPISGAVSVPTIPLRELAPWALFFGLLAVLVIFFVSADQGAVSIPSGNAIHEWV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHH
HDGRHLLGYPCH
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA