| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716921
Identifier: 119716921
GI number: 119716921
Start: 2863560
End: 2865305
Strand: Reverse
Name: 119716921
Synonym: Noca_2696
Alternate gene names: NA
Gene position: 2865305-2863560 (Counterclockwise)
Preceding gene: 119716924
Following gene: 119716920
Centisome position: 57.47
GC content: 74.05
Gene sequence:
>1746_bases ATGCAGCGGATCATTGCTCACCGTCGCGCGCGGGCCCTGGCCTCGCTCGTCACCGTCGCGGGCCTCGGCCTCGCGGCCAC CAGCGTCGGCACCGGGACGGCCCAGGCGGCCGACCCGACGGGGGACTGTGCGACCCCGTACCCGGTCGCCGACCTCACCG CCGACCAGCCGGTCACCGGCCTGACCGTCAGCCGCGGCACCACGCCGGAGGGCTTCACCGGTGAGGTGCTCGGCGTGCTC GACGACGGCATCGCGCCCGGCCTCGACATGGTGATGGTCCGCCTCACCTCGGCCGAGATCGACCGGGTCGGGATCTGGCA GGGCATGTCCGGGTCGCCGGTCTACGCGGCCGACGGCCGCCTGATCGGTGCCGTGGCCTACGGCCTGGCCATGGGCCCGT CACCGGTCGCCGGCGTCACGCCGTACGCCGACATGGACGACTACCTGGGCACCGGCGCCGCCCGCACCGTGACGGTCGAC CGCACCGCCGCGCGGACGATCGCGCAGCACAGCGAGGTCACCGCGCGGCAGGCCGGGCAGGGCTTCGCCCAGCTGCCGGC CCCGCTGGGCGTGGCGGGCGTCGGCGCCCGGCAGCTCACGCTCGCCCAGCAGCACGCGGGCACGCGCAGCTACCTCCCGC GCTCGGCGTACGCCGTCGGCCGGGCCTCGGCGACCGCCGCGGGCCCGGAGACGATCGTCGCCGGCGGCAACCTCGCGGCC TCGCTCGCGTACGGCGACATCACGATGGCCGCGGTCGGCACCGCGACGTCGGTGTGCGACGGCAACGTCGTCGGGTTCGG CCACCCGGTCCAGCGGCTCGGCGCGACCACGATGGCGCTGCACCCGGCCGACGCGATCTATGTCCAGGAGGACCTGATCG CCGGGTTCAAGCTCGCCAACATCGGCGCGCCCGCGGGCACGATCACCAACGACCGCACCACCGGCATCACCGGCGTCCTC GGCCCGCTGCCGGAGACCGCCGGCGTCTCGTCGCTCGTGACCTACGGCGAGCGCAGTCGCACCGGCGTCTCGCAGGTCTC GGTGCAGACGCCGGACGCGCTGGCGAGCACCACCTTCTACCAGTTCCTGGCCAACCAGGACCGGGTCGTCGACGGCACCG TCGACGGCAGCGAGCTGGCGTCGTGGACCGTGGCCGGCACCGGGCCGGACGGGGCGGCCTTCGAGCTGACCAGCACCGAC CTGTACGTCTCGGACTGGGACCTGTCCTACGAGGTCGGCTTCTCCCTCGGTGACATCGTCTACGCGCTCGCCCGGATCCC GGGGGTCACCATCGACAGCGTGTCGACCGACGCGACCGTGCTGGACGAGGCGACCTCGTACCGCCTCAGCGCGCTCCAGC GGAAGGTCGACGGCACGTGGACCAACGTGTCGCGCCGCCAGGCGATCCCGGTGCGCGCCGGGTCGAGGCTCACGCTGCAG GCGGTGCTGAGCGGCCCCACCGGGAGCACCACCGTGCCCGTGACGGTGCGGATCCCGCGGCGGATGGCCGGTGGCCAGGG GTTCCTGGACGTGACCGGCGGCCAGTACCTCGGCGGCCTGGGCCGGTTGACCAGCATCGAGCAGGCGCAGAAGGCCGTCG CGAACCTGGTCCGCAACGACCAGCTGAAGGTCACCCTGGTCTCGCTGAGCAAGCGCAGCCGCGGCCAGACGGTCAGCAGC CAGGTGCTCGGCCCGGTCGACGGCGTCGTCGCCGGGAGCAAGTCCGTGCAGCTCGTGGTGCGGTAG
Upstream 100 bases:
>100_bases GCGGGCCGTCGGGGGTCCCGACGCAACCGGGCGCGGGTCTTCGGAGTCCTACGGGTACGGCGCGAGATCCGCGCCGGAGT TTCGGGAGGAACCTACTCAC
Downstream 100 bases:
>100_bases CCCTGCGAGAGGGCCTCCCGGGTGGGAGCATGACCGACATGGTGGTCGTGCATGCCTGACCGGGAGGCCCTCCTCGGGCT GATCCGCGACTCGGTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MQRIIAHRRARALASLVTVAGLGLAATSVGTGTAQAADPTGDCATPYPVADLTADQPVTGLTVSRGTTPEGFTGEVLGVL DDGIAPGLDMVMVRLTSAEIDRVGIWQGMSGSPVYAADGRLIGAVAYGLAMGPSPVAGVTPYADMDDYLGTGAARTVTVD RTAARTIAQHSEVTARQAGQGFAQLPAPLGVAGVGARQLTLAQQHAGTRSYLPRSAYAVGRASATAAGPETIVAGGNLAA SLAYGDITMAAVGTATSVCDGNVVGFGHPVQRLGATTMALHPADAIYVQEDLIAGFKLANIGAPAGTITNDRTTGITGVL GPLPETAGVSSLVTYGERSRTGVSQVSVQTPDALASTTFYQFLANQDRVVDGTVDGSELASWTVAGTGPDGAAFELTSTD LYVSDWDLSYEVGFSLGDIVYALARIPGVTIDSVSTDATVLDEATSYRLSALQRKVDGTWTNVSRRQAIPVRAGSRLTLQ AVLSGPTGSTTVPVTVRIPRRMAGGQGFLDVTGGQYLGGLGRLTSIEQAQKAVANLVRNDQLKVTLVSLSKRSRGQTVSS QVLGPVDGVVAGSKSVQLVVR
Sequences:
>Translated_581_residues MQRIIAHRRARALASLVTVAGLGLAATSVGTGTAQAADPTGDCATPYPVADLTADQPVTGLTVSRGTTPEGFTGEVLGVL DDGIAPGLDMVMVRLTSAEIDRVGIWQGMSGSPVYAADGRLIGAVAYGLAMGPSPVAGVTPYADMDDYLGTGAARTVTVD RTAARTIAQHSEVTARQAGQGFAQLPAPLGVAGVGARQLTLAQQHAGTRSYLPRSAYAVGRASATAAGPETIVAGGNLAA SLAYGDITMAAVGTATSVCDGNVVGFGHPVQRLGATTMALHPADAIYVQEDLIAGFKLANIGAPAGTITNDRTTGITGVL GPLPETAGVSSLVTYGERSRTGVSQVSVQTPDALASTTFYQFLANQDRVVDGTVDGSELASWTVAGTGPDGAAFELTSTD LYVSDWDLSYEVGFSLGDIVYALARIPGVTIDSVSTDATVLDEATSYRLSALQRKVDGTWTNVSRRQAIPVRAGSRLTLQ AVLSGPTGSTTVPVTVRIPRRMAGGQGFLDVTGGQYLGGLGRLTSIEQAQKAVANLVRNDQLKVTLVSLSKRSRGQTVSS QVLGPVDGVVAGSKSVQLVVR >Mature_581_residues MQRIIAHRRARALASLVTVAGLGLAATSVGTGTAQAADPTGDCATPYPVADLTADQPVTGLTVSRGTTPEGFTGEVLGVL DDGIAPGLDMVMVRLTSAEIDRVGIWQGMSGSPVYAADGRLIGAVAYGLAMGPSPVAGVTPYADMDDYLGTGAARTVTVD RTAARTIAQHSEVTARQAGQGFAQLPAPLGVAGVGARQLTLAQQHAGTRSYLPRSAYAVGRASATAAGPETIVAGGNLAA SLAYGDITMAAVGTATSVCDGNVVGFGHPVQRLGATTMALHPADAIYVQEDLIAGFKLANIGAPAGTITNDRTTGITGVL GPLPETAGVSSLVTYGERSRTGVSQVSVQTPDALASTTFYQFLANQDRVVDGTVDGSELASWTVAGTGPDGAAFELTSTD LYVSDWDLSYEVGFSLGDIVYALARIPGVTIDSVSTDATVLDEATSYRLSALQRKVDGTWTNVSRRQAIPVRAGSRLTLQ AVLSGPTGSTTVPVTVRIPRRMAGGQGFLDVTGGQYLGGLGRLTSIEQAQKAVANLVRNDQLKVTLVSLSKRSRGQTVSS QVLGPVDGVVAGSKSVQLVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59417; Mature: 59417
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRIIAHRRARALASLVTVAGLGLAATSVGTGTAQAADPTGDCATPYPVADLTADQPVTG CCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTVSRGTTPEGFTGEVLGVLDDGIAPGLDMVMVRLTSAEIDRVGIWQGMSGSPVYAADGR EEEECCCCCCCCCCCCCEECCCCCCCCHHHHHEEHHHCCCCEEEEECCCCCCEEEEECCC LIGAVAYGLAMGPSPVAGVTPYADMDDYLGTGAARTVTVDRTAARTIAQHSEVTARQAGQ EEEHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCC GFAQLPAPLGVAGVGARQLTLAQQHAGTRSYLPRSAYAVGRASATAAGPETIVAGGNLAA CHHHCCCCCCCCCCCHHHEEHHHHHCCCHHCCCCCHHHHCCCCCCCCCCCEEEECCCEEE SLAYGDITMAAVGTATSVCDGNVVGFGHPVQRLGATTMALHPADAIYVQEDLIAGFKLAN EEEECCEEEEECCCHHHCCCCCEEECCCHHHHHCCEEEEECCCCEEEEEHHHHCCEEEEC IGAPAGTITNDRTTGITGVLGPLPETAGVSSLVTYGERSRTGVSQVSVQTPDALASTTFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHH QFLANQDRVVDGTVDGSELASWTVAGTGPDGAAFELTSTDLYVSDWDLSYEVGFSLGDIV HHHCCCCEEEECCCCCHHHCEEEEEECCCCCCEEEEECCEEEEECCCCEEEECCCHHHHH YALARIPGVTIDSVSTDATVLDEATSYRLSALQRKVDGTWTNVSRRQAIPVRAGSRLTLQ HHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEE AVLSGPTGSTTVPVTVRIPRRMAGGQGFLDVTGGQYLGGLGRLTSIEQAQKAVANLVRND EEECCCCCCEEEEEEEEECCHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCC QLKVTLVSLSKRSRGQTVSSQVLGPVDGVVAGSKSVQLVVR CEEEEEEEECCCCCCCCHHHHHCCCCCCEEECCCCEEEEEC >Mature Secondary Structure MQRIIAHRRARALASLVTVAGLGLAATSVGTGTAQAADPTGDCATPYPVADLTADQPVTG CCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTVSRGTTPEGFTGEVLGVLDDGIAPGLDMVMVRLTSAEIDRVGIWQGMSGSPVYAADGR EEEECCCCCCCCCCCCCEECCCCCCCCHHHHHEEHHHCCCCEEEEECCCCCCEEEEECCC LIGAVAYGLAMGPSPVAGVTPYADMDDYLGTGAARTVTVDRTAARTIAQHSEVTARQAGQ EEEHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCC GFAQLPAPLGVAGVGARQLTLAQQHAGTRSYLPRSAYAVGRASATAAGPETIVAGGNLAA CHHHCCCCCCCCCCCHHHEEHHHHHCCCHHCCCCCHHHHCCCCCCCCCCCEEEECCCEEE SLAYGDITMAAVGTATSVCDGNVVGFGHPVQRLGATTMALHPADAIYVQEDLIAGFKLAN EEEECCEEEEECCCHHHCCCCCEEECCCHHHHHCCEEEEECCCCEEEEEHHHHCCEEEEC IGAPAGTITNDRTTGITGVLGPLPETAGVSSLVTYGERSRTGVSQVSVQTPDALASTTFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHH QFLANQDRVVDGTVDGSELASWTVAGTGPDGAAFELTSTDLYVSDWDLSYEVGFSLGDIV HHHCCCCEEEECCCCCHHHCEEEEEECCCCCCEEEEECCEEEEECCCCEEEECCCHHHHH YALARIPGVTIDSVSTDATVLDEATSYRLSALQRKVDGTWTNVSRRQAIPVRAGSRLTLQ HHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEE AVLSGPTGSTTVPVTVRIPRRMAGGQGFLDVTGGQYLGGLGRLTSIEQAQKAVANLVRND EEECCCCCCEEEEEEEEECCHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCC QLKVTLVSLSKRSRGQTVSSQVLGPVDGVVAGSKSVQLVVR CEEEEEEEECCCCCCCCHHHHHCCCCCCEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA