| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is corA [H]
Identifier: 119716849
GI number: 119716849
Start: 2793021
End: 2793992
Strand: Reverse
Name: corA [H]
Synonym: Noca_2624
Alternate gene names: 119716849
Gene position: 2793992-2793021 (Counterclockwise)
Preceding gene: 119716855
Following gene: 119716847
Centisome position: 56.04
GC content: 69.24
Gene sequence:
>972_bases GTGATCGTCGACTGCGCCCTGTACCGCGACGGCAGGCGGGTCGAGGGCGGCACCCACTGGCGGGAGCTGCGGGCGAAGGC GGACGCGGACGGCGACTTCATCTGGATCGGGATGCACGAACCCACGCACGACGAGGTGCACGAGGTCGCCGAGGTGTTCG GGCTCCACCAGCTCGCGGTCGAGGACGCCGTGAAGGCGCACCAGCGGCCGAAGCTGGAGCGGTTCGACGACATGGTGTTC CTGATCCTCAAGACGCTGTGGTACGTCGACGAGCAGGACGCGGTCGAGACCGGCGAGATCGCGATGTTCGTCGGCGCGGA CTTCGTCGTCTCCGTCCGCCACGGTCAGGGCAACGAGCTGCACTCGGCCCGCGCGGAGCTGGAGTCGAGCAGGAGGGTGC TCAGCCACGGCCCGGGCGGGGTGCTGTACGCGGTGATCGACCGGGTCGTGGACGAGTACCTCGACGTCGTCGACGAGCTG GTCGTCGACGTGGACGAGATCGAGGCGTCGGTGTTCTCCGACGACCGCACCAACGACTCCGCCCGCATCTACGTGCTCAA GCGGGAGATCGCGGAGGTACGCCGCGCGGTGCTGCCGCTGCGGGACCCGATGACCCGGCTGGCCGCCGGGACGGTCACCG GGATCCCGGAGGAGGCGGCGCCGTTCTTCCGCGATGTCGGCGACCACCTGGCCCGGGCGGCGGAGACCGTGGACACCCTG GACACCCTGCTCTCGACGGCGTTCGACGCCCACCTCGCCCAGATCTCGGTGCAGCAGAACAACGACATGCGCAAGATCTC CGCAGGAGCCGCACTGGTGGTCGTGCCGACCCTGATCGCCGGGGTCTACGGCATGAACTTCCGGCACATGCCCGAGCTCG ACTGGACCTACGGCTACCCGTTCGCGCTCGCGCTGATGGCGGCGGTCGCCCTGGGGCTGTGGGTGCTGTTCAAGAAGTCC GGGTGGTTGTAG
Upstream 100 bases:
>100_bases CGGCCGGTCAGGGTACCCGCGGCGTTCGCCGTCGTCCGACCGTGTCGGACGAGGATCACGGTTGCCATGCGGTGGACTGT AGTGGGGCTACCGTGGGCGC
Downstream 100 bases:
>100_bases GGGCCGAGGCCGGCCAGCCCCGCTGGCGCATCTGCGCTACGCCGCGATCACGCCGGTCGCGACCAGGACCAGCGTCGCCG CACCGAGGGCCACGCGGTAC
Product: magnesium and cobalt transport protein CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MIVDCALYRDGRRVEGGTHWRELRAKADADGDFIWIGMHEPTHDEVHEVAEVFGLHQLAVEDAVKAHQRPKLERFDDMVF LILKTLWYVDEQDAVETGEIAMFVGADFVVSVRHGQGNELHSARAELESSRRVLSHGPGGVLYAVIDRVVDEYLDVVDEL VVDVDEIEASVFSDDRTNDSARIYVLKREIAEVRRAVLPLRDPMTRLAAGTVTGIPEEAAPFFRDVGDHLARAAETVDTL DTLLSTAFDAHLAQISVQQNNDMRKISAGAALVVVPTLIAGVYGMNFRHMPELDWTYGYPFALALMAAVALGLWVLFKKS GWL
Sequences:
>Translated_323_residues MIVDCALYRDGRRVEGGTHWRELRAKADADGDFIWIGMHEPTHDEVHEVAEVFGLHQLAVEDAVKAHQRPKLERFDDMVF LILKTLWYVDEQDAVETGEIAMFVGADFVVSVRHGQGNELHSARAELESSRRVLSHGPGGVLYAVIDRVVDEYLDVVDEL VVDVDEIEASVFSDDRTNDSARIYVLKREIAEVRRAVLPLRDPMTRLAAGTVTGIPEEAAPFFRDVGDHLARAAETVDTL DTLLSTAFDAHLAQISVQQNNDMRKISAGAALVVVPTLIAGVYGMNFRHMPELDWTYGYPFALALMAAVALGLWVLFKKS GWL >Mature_323_residues MIVDCALYRDGRRVEGGTHWRELRAKADADGDFIWIGMHEPTHDEVHEVAEVFGLHQLAVEDAVKAHQRPKLERFDDMVF LILKTLWYVDEQDAVETGEIAMFVGADFVVSVRHGQGNELHSARAELESSRRVLSHGPGGVLYAVIDRVVDEYLDVVDEL VVDVDEIEASVFSDDRTNDSARIYVLKREIAEVRRAVLPLRDPMTRLAAGTVTGIPEEAAPFFRDVGDHLARAAETVDTL DTLLSTAFDAHLAQISVQQNNDMRKISAGAALVVVPTLIAGVYGMNFRHMPELDWTYGYPFALALMAAVALGLWVLFKKS GWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=306, Percent_Identity=24.5098039215686, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787604, Length=296, Percent_Identity=21.6216216216216, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 35981; Mature: 35981
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDCALYRDGRRVEGGTHWRELRAKADADGDFIWIGMHEPTHDEVHEVAEVFGLHQLAV CEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH EDAVKAHQRPKLERFDDMVFLILKTLWYVDEQDAVETGEIAMFVGADFVVSVRHGQGNEL HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCHH HSARAELESSRRVLSHGPGGVLYAVIDRVVDEYLDVVDELVVDVDEIEASVFSDDRTNDS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ARIYVLKREIAEVRRAVLPLRDPMTRLAAGTVTGIPEEAAPFFRDVGDHLARAAETVDTL EEEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DTLLSTAFDAHLAQISVQQNNDMRKISAGAALVVVPTLIAGVYGMNFRHMPELDWTYGYP HHHHHHHHHHHHHHEEECCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH FALALMAAVALGLWVLFKKSGWL HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIVDCALYRDGRRVEGGTHWRELRAKADADGDFIWIGMHEPTHDEVHEVAEVFGLHQLAV CEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH EDAVKAHQRPKLERFDDMVFLILKTLWYVDEQDAVETGEIAMFVGADFVVSVRHGQGNEL HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCHH HSARAELESSRRVLSHGPGGVLYAVIDRVVDEYLDVVDELVVDVDEIEASVFSDDRTNDS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ARIYVLKREIAEVRRAVLPLRDPMTRLAAGTVTGIPEEAAPFFRDVGDHLARAAETVDTL EEEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DTLLSTAFDAHLAQISVQQNNDMRKISAGAALVVVPTLIAGVYGMNFRHMPELDWTYGYP HHHHHHHHHHHHHHEEECCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH FALALMAAVALGLWVLFKKSGWL HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]