Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716855

Identifier: 119716855

GI number: 119716855

Start: 2797996

End: 2798844

Strand: Reverse

Name: 119716855

Synonym: Noca_2630

Alternate gene names: NA

Gene position: 2798844-2797996 (Counterclockwise)

Preceding gene: 119716861

Following gene: 119716849

Centisome position: 56.14

GC content: 71.02

Gene sequence:

>849_bases
GTGATCGAGCTCGAGGACGTCCCGGACCTGGTGGACCCCGTGGTGATCGCCGCGTTCGAGGGCTGGAACGACGCCGCGGA
CGCGGCCTCCTCGGTGATCGACCACCTGATCCGGGTATGGGGTGCGCGGACCGTCGGCGCCGTCGACCCCGAGGACTTCT
ACGACTTCCAGGTCAACCGTCCCGTGGTCGGCACCGACGAGCTGGGCCACCGCCGACTGACCTGGCCGAGCACCCAGATC
GCGATCGCCTCGCCTCCCGACCTCGACCGCGACGTGATCTTGATCCGTGGCATCGAGCCGAACATGCGGTGGCGCCAGTT
CTGTGCCGAGCTGCTCGCCGCCTGCGACGAGCTCGGCGGTGAGCTCGTCGTGACGCTCGGCGCCCTGCTCGCCGACACAC
CGCACACCCGGCCGATCCCGGTCAGCGGCACCGCCACCGAGCCCGAGCTCGTCGACCGGCTCAAGCTCGAGCAGTCGACG
TACGAGGGACCGACGGGCATCGTCGGCGTCTTCCAGGACGCGTGCATGCGGGTGGACGTGCCGGCCGTGTCGTACTGGGC
GGCGGTCCCTCACTACGTCGCGCAGCCGCCGTGCCCCAAGGCGACGCTCGCGCTGATCGGACAGCTCGAGGACCTGCTCG
AGGTCAGCATCCCCCTCGGCGACCTGCCCGAGGACGCCCGCGCCTGGGAGCGTGGTGTCGACGAGCTCGCCCAGGAGGAC
GAGGACATCGCGGACTACGTGCGGGCCCTCGAGGAGACCCGCGACACCACCGACCTGCCCGAAGCGTCCGGCGAGGCGAT
CGCGCGCGAGTTCGAGCGGTACCTCAAGCGCCGTCAGGGCGACGAGTAG

Upstream 100 bases:

>100_bases
TGCCAGCGTAGGAACCGTGTCCACGACGTGGACTCGCCATCCAGATCGTGACATCGCGCGTCCGCAGGGGAGAAATCCCC
GCGGCGACTACGCTTGTGGG

Downstream 100 bases:

>100_bases
ATCGGTCCACGGCCGGCCTGGGAGGGCCGGGGTCGGCTCCGCGCCCGGTGATGTCCGTCGTTTGGTCACCAACCACAGTT
GGGAGCGCTCCCGATCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNRPVVGTDELGHRRLTWPSTQI
AIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGGELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQST
YEGPTGIVGVFQDACMRVDVPAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED
EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE

Sequences:

>Translated_282_residues
MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNRPVVGTDELGHRRLTWPSTQI
AIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGGELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQST
YEGPTGIVGVFQDACMRVDVPAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED
EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE
>Mature_282_residues
MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNRPVVGTDELGHRRLTWPSTQI
AIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGGELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQST
YEGPTGIVGVFQDACMRVDVPAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED
EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31078; Mature: 31078

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNR
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEECCC
PVVGTDELGHRRLTWPSTQIAIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGG
CCCCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
ELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQSTYEGPTGIVGVFQDACMRVDV
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNR
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEECCC
PVVGTDELGHRRLTWPSTQIAIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGG
CCCCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
ELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQSTYEGPTGIVGVFQDACMRVDV
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA