Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716806
Identifier: 119716806
GI number: 119716806
Start: 2746208
End: 2746516
Strand: Reverse
Name: 119716806
Synonym: Noca_2580
Alternate gene names: NA
Gene position: 2746516-2746208 (Counterclockwise)
Preceding gene: 119716808
Following gene: 119716801
Centisome position: 55.09
GC content: 72.17
Gene sequence:
>309_bases GTGGCGCTCGCGAACCCCGGCCTCGCCGTCAAGCTGTTCCAGCTCGACCCGGCGACCAACCCGCAGCTGCCCTACCTCAC CCGGCTCTTCGGCTCCCGCGAGGTCGCGCTCGGCCTGGTCACCCTGCTGGCCCGCGACACCTCACGCCGCAACCTGGTGC TCGCCGGCATCCTGGTGGACGCCGCGGACGCCGCCACCGGCTACCTGGCCATGCAGGACGGGACCGTGTCGAAGAAGACC GCCCTGACCCTGATCGCTCCCGCCGTCGGAGCGGTCGGATCAGGCATCTCCGGCCTGTTCCGCCGCTGA
Upstream 100 bases:
>100_bases GCGTCGAGCCTGTCACGGAGCCCCGGCCAGGGCGAGCGATAGCGTGCCCGCCATGAACCCAGTGATCGGTCTGTCCCTCG GTCGAGTCGCGGTCGGGGCC
Downstream 100 bases:
>100_bases CGCCACCAAAGCGGCACCCGCCGCGGCGCACCCGTCGTTGTCGTTTGGTCACCAACCACAGCGATTTCCGCTCTGAATCT GTCGTTGGTGACCAAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MALANPGLAVKLFQLDPATNPQLPYLTRLFGSREVALGLVTLLARDTSRRNLVLAGILVDAADAATGYLAMQDGTVSKKT ALTLIAPAVGAVGSGISGLFRR
Sequences:
>Translated_102_residues MALANPGLAVKLFQLDPATNPQLPYLTRLFGSREVALGLVTLLARDTSRRNLVLAGILVDAADAATGYLAMQDGTVSKKT ALTLIAPAVGAVGSGISGLFRR >Mature_101_residues ALANPGLAVKLFQLDPATNPQLPYLTRLFGSREVALGLVTLLARDTSRRNLVLAGILVDAADAATGYLAMQDGTVSKKTA LTLIAPAVGAVGSGISGLFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10565; Mature: 10433
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALANPGLAVKLFQLDPATNPQLPYLTRLFGSREVALGLVTLLARDTSRRNLVLAGILVD CCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEE AADAATGYLAMQDGTVSKKTALTLIAPAVGAVGSGISGLFRR CCCCCCCEEEECCCCCCCHHHHEEEHHHHHHCCCCCHHHHCC >Mature Secondary Structure ALANPGLAVKLFQLDPATNPQLPYLTRLFGSREVALGLVTLLARDTSRRNLVLAGILVD CCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEE AADAATGYLAMQDGTVSKKTALTLIAPAVGAVGSGISGLFRR CCCCCCCEEEECCCCCCCHHHHEEEHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA