Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716801
Identifier: 119716801
GI number: 119716801
Start: 2742047
End: 2742784
Strand: Reverse
Name: 119716801
Synonym: Noca_2575
Alternate gene names: NA
Gene position: 2742784-2742047 (Counterclockwise)
Preceding gene: 119716806
Following gene: 119716800
Centisome position: 55.01
GC content: 77.91
Gene sequence:
>738_bases GTGACGCTTGTGCTGCCGGCCTCCGCGCGCCTGGCCTGGTGGGGTACGGCGTGGCTGCGTGGGCACGTGGTCACGGACCT GGTGGTCGACGCCGTCCTGGCCGAGGATGCGACCCATGCGGTCGCGGGAGTTCCCGGTGCGGAAGGGACCGAGACCCTCG TCGGTGCGCTGGCCCGGCTGCGAGCCCTGGGCGCCACCGGCTTCGGGGCGACGTTCCCGGTCGACGGCGACCCGGTGGGC CTCGGCGGCCCGCCCACCTTCAACTCGGAGGCTCTCGAGGCCGGCGAGGCCGTCGTCGTCCTCGGCGCCGGGCTCGGCCT GGTGCCGCACCGCACCGGCGCGGCGACCGGCTGGACCGTCCACCCGGCGTCGGACCGCCGCCAGCTCCCCGACGTGGGCG AGGCGGACCGGGAGCTGCGCGCGGCCCTGCTCGAGGCGGCCGAGTCGCTGGCCCGGCTCGACGTCGCCCGGTGGCGGCCG GAGGTGGCGGACCGCCTGATGAACCTGCGCCACCGGCCGGTCCCGGCGGCGCCGGCCGGAGTCCCGGCGCGCTGCACCGA CTTGGCCGGCCGCGGTCTGCAGGCGACCGAGATCGTCGAGCTCGCGCTCGAGGACGTGGGCGGCGCCCTGACGGCGTACG AGATCGCGGAGCGCCGCGGTGCCCTGGTGTCGCTCGCGCGCGCTGGCCGGCGGGCCCTGGTAGCGGCCTGCTCACCGGAG GCGTGGCCTCCGGCATGA
Upstream 100 bases:
>100_bases GCCCACGCCGGATGGTCACCTCGGCGAAGTCGAGCACGGCGGTCATGTGACTCACCCTATCGACCGGCCTCGGCGCCTCC GCGGCGTATCCTCACCCGCC
Downstream 100 bases:
>100_bases GGTCGGCCGCCGCGATAGCCTCGGCGACTGACATGACTAACGCGCAGGCCGGCCGCAAGCCGGAGACCCTCCTCATCACG CTGACCGGCAAGGACCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTLVLPASARLAWWGTAWLRGHVVTDLVVDAVLAEDATHAVAGVPGAEGTETLVGALARLRALGATGFGATFPVDGDPVG LGGPPTFNSEALEAGEAVVVLGAGLGLVPHRTGAATGWTVHPASDRRQLPDVGEADRELRAALLEAAESLARLDVARWRP EVADRLMNLRHRPVPAAPAGVPARCTDLAGRGLQATEIVELALEDVGGALTAYEIAERRGALVSLARAGRRALVAACSPE AWPPA
Sequences:
>Translated_245_residues MTLVLPASARLAWWGTAWLRGHVVTDLVVDAVLAEDATHAVAGVPGAEGTETLVGALARLRALGATGFGATFPVDGDPVG LGGPPTFNSEALEAGEAVVVLGAGLGLVPHRTGAATGWTVHPASDRRQLPDVGEADRELRAALLEAAESLARLDVARWRP EVADRLMNLRHRPVPAAPAGVPARCTDLAGRGLQATEIVELALEDVGGALTAYEIAERRGALVSLARAGRRALVAACSPE AWPPA >Mature_244_residues TLVLPASARLAWWGTAWLRGHVVTDLVVDAVLAEDATHAVAGVPGAEGTETLVGALARLRALGATGFGATFPVDGDPVGL GGPPTFNSEALEAGEAVVVLGAGLGLVPHRTGAATGWTVHPASDRRQLPDVGEADRELRAALLEAAESLARLDVARWRPE VADRLMNLRHRPVPAAPAGVPARCTDLAGRGLQATEIVELALEDVGGALTAYEIAERRGALVSLARAGRRALVAACSPEA WPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25246; Mature: 25115
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVLPASARLAWWGTAWLRGHVVTDLVVDAVLAEDATHAVAGVPGAEGTETLVGALARL CEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH RALGATGFGATFPVDGDPVGLGGPPTFNSEALEAGEAVVVLGAGLGLVPHRTGAATGWTV HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEE HPASDRRQLPDVGEADRELRAALLEAAESLARLDVARWRPEVADRLMNLRHRPVPAAPAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC VPARCTDLAGRGLQATEIVELALEDVGGALTAYEIAERRGALVSLARAGRRALVAACSPE CCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC AWPPA CCCCC >Mature Secondary Structure TLVLPASARLAWWGTAWLRGHVVTDLVVDAVLAEDATHAVAGVPGAEGTETLVGALARL EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH RALGATGFGATFPVDGDPVGLGGPPTFNSEALEAGEAVVVLGAGLGLVPHRTGAATGWTV HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEE HPASDRRQLPDVGEADRELRAALLEAAESLARLDVARWRPEVADRLMNLRHRPVPAAPAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC VPARCTDLAGRGLQATEIVELALEDVGGALTAYEIAERRGALVSLARAGRRALVAACSPE CCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC AWPPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA